PI0004448.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0004448.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 18866043 .. 18866725 (+)
Sequence length	663
RNA-Seq Expression	PI0004448.1
Synteny	PI0004448.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCCACGCGGCAAGGCAGAAAGCTTACGCGAGAAGACGTCTGAACTACAAGCTTCTCGGCGAACAAGGCTACGCGGCAAGAGAAAACAACCAGGCGAAGAGAAAGTCAGGAGCCAAAACGCGGGGAAAGCTTTAACAAAACGCGAGGAGAAAACTTACCTCGCGAACAAGGAATCTTGCGAAGAAGGACTAGGCGAGAAGACCCAACTCGTAACAAGACAACTAGCACGCGAACAAGGGCAGGCGGCGGGGAACTCGCGGACCAAACCTCAGCTTCGCGAGCTACTCCTTAGCTCGCGAACTTTTTCACCAATGGATGAATCAAATCGCGAAGAATACTTGTGAACACTCTTAAGCTCAGGCGGACTTCCTTAGTTCCCAAAACTTCACCTCTCCTCGCGAGCTACACAACCTCGCGAACAACACAGCTTCGCGGGGAAGGAAAGCACCCAAAACGCGAGCAACTGAAACACGCGGCAAGAACCTTACTTCACGGCAAGGTAAGCTTCGGATGGACGAAAAGAGGAAGTTTTGGACGGAAAGCTTACCGGAGAAGAAAACCCAACACGGCGGCGAACCACGAAACCAACCCCACGAGAACAACTCCAAACGCAACAACTACGCTAACGAAAACCCCTTTCGCGACAAGAAAGGCTGAGAAACCTCCACGGCGGGGCTGA

mRNA sequence

ATGCACCCACGCGGCAAGGCAGAAAGCTTACGCGAGAAGACGTCTGAACTACAAGCTTCTCGGCGAACAAGGCTACGCGGCAAGAGAAAACAACCAGGCGAAGAGAAAGTCAGGAGCCAAAACGCGGGGAAAGCTTTAACAAAACGCGAGGAGAAAACTTACCTCGCGAACAAGGAATCTTGCGAAGAAGGACTAGGCGAGAAGACCCAACTCGTAACAAGACAACTAGCACGCGAACAAGGGCAGGCGGCGGGGAACTCGCGGACCAAACCTCAGCTTCGCGAGCTACTCCTTAGCTCGCGAACTTTTTCACCAATGGATGAATCAAATCGCGAAGAATACTTGCGGACTTCCTTAGTTCCCAAAACTTCACCTCTCCTCGCGAGCTACACAACCTCGCGAACAACACAGCTTCGCGGGGAAGGAAAGCACCCAAAACGCGAGCAACTGAAACACGCGGCAAGAACCTTACTTCACGGCAAGGTAAGCTTCGGATGGACGAAAAGAGGAAGTTTTGGACGGAAAGCTTACCGGAGAAGAAAACCCAACACGGCGGCGAACCACGAAACCAACCCCACGAGAACAACTCCAAACGCAACAACTACGCTAACGAAAACCCCTTTCGCGACAAGAAAGGCTGAGAAACCTCCACGGCGGGGCTGA

Coding sequence (CDS)

ATGCACCCACGCGGCAAGGCAGAAAGCTTACGCGAGAAGACGTCTGAACTACAAGCTTCTCGGCGAACAAGGCTACGCGGCAAGAGAAAACAACCAGGCGAAGAGAAAGTCAGGAGCCAAAACGCGGGGAAAGCTTTAACAAAACGCGAGGAGAAAACTTACCTCGCGAACAAGGAATCTTGCGAAGAAGGACTAGGCGAGAAGACCCAACTCGTAACAAGACAACTAGCACGCGAACAAGGGCAGGCGGCGGGGAACTCGCGGACCAAACCTCAGCTTCGCGAGCTACTCCTTAGCTCGCGAACTTTTTCACCAATGGATGAATCAAATCGCGAAGAATACTTGCGGACTTCCTTAGTTCCCAAAACTTCACCTCTCCTCGCGAGCTACACAACCTCGCGAACAACACAGCTTCGCGGGGAAGGAAAGCACCCAAAACGCGAGCAACTGAAACACGCGGCAAGAACCTTACTTCACGGCAAGGTAAGCTTCGGATGGACGAAAAGAGGAAGTTTTGGACGGAAAGCTTACCGGAGAAGAAAACCCAACACGGCGGCGAACCACGAAACCAACCCCACGAGAACAACTCCAAACGCAACAACTACGCTAACGAAAACCCCTTTCGCGACAAGAAAGGCTGAGAAACCTCCACGGCGGGGCTGA

Protein sequence

MHPRGKAESLREKTSELQASRRTRLRGKRKQPGEEKVRSQNAGKALTKREEKTYLANKESCEEGLGEKTQLVTRQLAREQGQAAGNSRTKPQLRELLLSSRTFSPMDESNREEYLRTSLVPKTSPLLASYTTSRTTQLRGEGKHPKREQLKHAARTLLHGKVSFGWTKRGSFGRKAYRRRKPNTAANHETNPTRTTPNATTTLTKTPFATRKAEKPPRRG

Homology

The following BLAST results are available for this feature:

BLAST of PI0004448.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004448.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004448.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004448.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0004448	PI0004448	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0004448.1-exon	PI0004448.1-exon-chr03:18866043..18866386	exon
PI0004448.1-exon	PI0004448.1-exon-chr03:18866407..18866725	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0004448.1-cds	PI0004448.1-cds-chr03:18866043..18866386	CDS
PI0004448.1-cds	PI0004448.1-cds-chr03:18866407..18866725	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0004448.1	PI0004448.1-protein	polypeptide