PI0004448 (gene) Melon (PI 482460) v1

Overview


Name	PI0004448
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 18866043 .. 18866725 (+)
RNA-Seq Expression	PI0004448
Synteny	PI0004448

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCCACGCGGCAAGGCAGAAAGCTTACGCGAGAAGACGTCTGAACTACAAGCTTCTCGGCGAACAAGGCTACGCGGCAAGAGAAAACAACCAGGCGAAGAGAAAGTCAGGAGCCAAAACGCGGGGAAAGCTTTAACAAAACGCGAGGAGAAAACTTACCTCGCGAACAAGGAATCTTGCGAAGAAGGACTAGGCGAGAAGACCCAACTCGTAACAAGACAACTAGCACGCGAACAAGGGCAGGCGGCGGGGAACTCGCGGACCAAACCTCAGCTTCGCGAGCTACTCCTTAGCTCGCGAACTTTTTCACCAATGGATGAATCAAATCGCGAAGAATACTTGTGAACACTCTTAAGCTCAGGCGGACTTCCTTAGTTCCCAAAACTTCACCTCTCCTCGCGAGCTACACAACCTCGCGAACAACACAGCTTCGCGGGGAAGGAAAGCACCCAAAACGCGAGCAACTGAAACACGCGGCAAGAACCTTACTTCACGGCAAGGTAAGCTTCGGATGGACGAAAAGAGGAAGTTTTGGACGGAAAGCTTACCGGAGAAGAAAACCCAACACGGCGGCGAACCACGAAACCAACCCCACGAGAACAACTCCAAACGCAACAACTACGCTAACGAAAACCCCTTTCGCGACAAGAAAGGCTGAGAAACCTCCACGGCGGGGCTGA

mRNA sequence

ATGCACCCACGCGGCAAGGCAGAAAGCTTACGCGAGAAGACGTCTGAACTACAAGCTTCTCGGCGAACAAGGCTACGCGGCAAGAGAAAACAACCAGGCGAAGAGAAAGTCAGGAGCCAAAACGCGGGGAAAGCTTTAACAAAACGCGAGGAGAAAACTTACCTCGCGAACAAGGAATCTTGCGAAGAAGGACTAGGCGAGAAGACCCAACTCGTAACAAGACAACTAGCACGCGAACAAGGGCAGGCGGCGGGGAACTCGCGGACCAAACCTCAGCTTCGCGAGCTACTCCTTAGCTCGCGAACTTTTTCACCAATGGATGAATCAAATCGCGAAGAATACTTGCGGACTTCCTTAGTTCCCAAAACTTCACCTCTCCTCGCGAGCTACACAACCTCGCGAACAACACAGCTTCGCGGGGAAGGAAAGCACCCAAAACGCGAGCAACTGAAACACGCGGCAAGAACCTTACTTCACGGCAAGGTAAGCTTCGGATGGACGAAAAGAGGAAGTTTTGGACGGAAAGCTTACCGGAGAAGAAAACCCAACACGGCGGCGAACCACGAAACCAACCCCACGAGAACAACTCCAAACGCAACAACTACGCTAACGAAAACCCCTTTCGCGACAAGAAAGGCTGAGAAACCTCCACGGCGGGGCTGA

Coding sequence (CDS)

ATGCACCCACGCGGCAAGGCAGAAAGCTTACGCGAGAAGACGTCTGAACTACAAGCTTCTCGGCGAACAAGGCTACGCGGCAAGAGAAAACAACCAGGCGAAGAGAAAGTCAGGAGCCAAAACGCGGGGAAAGCTTTAACAAAACGCGAGGAGAAAACTTACCTCGCGAACAAGGAATCTTGCGAAGAAGGACTAGGCGAGAAGACCCAACTCGTAACAAGACAACTAGCACGCGAACAAGGGCAGGCGGCGGGGAACTCGCGGACCAAACCTCAGCTTCGCGAGCTACTCCTTAGCTCGCGAACTTTTTCACCAATGGATGAATCAAATCGCGAAGAATACTTGCGGACTTCCTTAGTTCCCAAAACTTCACCTCTCCTCGCGAGCTACACAACCTCGCGAACAACACAGCTTCGCGGGGAAGGAAAGCACCCAAAACGCGAGCAACTGAAACACGCGGCAAGAACCTTACTTCACGGCAAGGTAAGCTTCGGATGGACGAAAAGAGGAAGTTTTGGACGGAAAGCTTACCGGAGAAGAAAACCCAACACGGCGGCGAACCACGAAACCAACCCCACGAGAACAACTCCAAACGCAACAACTACGCTAACGAAAACCCCTTTCGCGACAAGAAAGGCTGAGAAACCTCCACGGCGGGGCTGA

Protein sequence

MHPRGKAESLREKTSELQASRRTRLRGKRKQPGEEKVRSQNAGKALTKREEKTYLANKESCEEGLGEKTQLVTRQLAREQGQAAGNSRTKPQLRELLLSSRTFSPMDESNREEYLRTSLVPKTSPLLASYTTSRTTQLRGEGKHPKREQLKHAARTLLHGKVSFGWTKRGSFGRKAYRRRKPNTAANHETNPTRTTPNATTTLTKTPFATRKAEKPPRRG

Homology

The following BLAST results are available for this feature:

BLAST of PI0004448 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004448 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004448 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004448 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0004448.1	PI0004448.1	mRNA