PI0002758.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0002758.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr05: 19326358 .. 19327028 (+)
Sequence length	369
RNA-Seq Expression	PI0002758.1
Synteny	PI0002758.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTTCTCTCTCTGTCTCATGTAATTTCCTTTTTTTTTCCTGAACGGTGGTATTTTTCTTTCATTTTTGAACATAAACAGTTCGTAAAAGCTGAAAATATTAGCACTAGACTGCCTAAAAAGCAAGAAAAGAAAAACCCAGAAGAGAGAGAGAGAAGAACATAAAAGAACATTGAAGACAGGCACTGAGTTAACCAGTAAACATGGTGGAATTGAAGCTAAAGCAAAAGCAACAGTAACTATTTCAGAATAAAAACAACCCCTCTTCTTTTTTCTTTTTTTTTTAAAGAAGAAAAAGAATCTCTTTGGTAAGTTCTTTGATTCTTTCGTATTTTTTTGTAGCACCGTTATAATGTATACTCTCTTGAATTTTCATTCCTTGTTTCTTGTTTTGTGTGAAAATTTTGATGTTAATCATTCAGGTTTGCACAAACCACTGAGTTGAAGAAGATAAATGAACATAACTCATCATGTTCAATAGGTAGTGCTTATCATTCTCTTTTTTCTTTCATCTTTAAGATTTCTCCTAAATTGAGTATGGAAAAATCTAACTTCTGGGGTTTCATTTCTTTTTTAAAGAACTTGCTTCAGATAACAAGAAAGCCAGAGAGAATGGCTTGATGGTTCACATTTTCAAGATTTTGGGTCAAAATTTCTATCTGGGTTGA

mRNA sequence

ATGTTGCTTCTCTCTCTGTCTCATCTGAAAATATTAGCACTAGACTGCCTAAAAAGCAAGAAAAGAAAAACCCAGAAGAGAGAGAGAGAAGAACATAAAAGAACATTGAAGACAGGCACTGAGTTAACCAGTAAACATGGTGGAATTGAAGCTAAAGCAAAAGCAACAAAGAAAAAGAATCTCTTTGGTAAGTTCTTTGATTCTTTCGTATTTTTTTGTAGCACCGTTATAATGTTTGCACAAACCACTGAGTTGAAGAAGATAAATGAACATAACTCATCATGTTCAATAGATAACAAGAAAGCCAGAGAGAATGGCTTGATGGTTCACATTTTCAAGATTTTGGGTCAAAATTTCTATCTGGGTTGA

Coding sequence (CDS)

ATGTTGCTTCTCTCTCTGTCTCATCTGAAAATATTAGCACTAGACTGCCTAAAAAGCAAGAAAAGAAAAACCCAGAAGAGAGAGAGAGAAGAACATAAAAGAACATTGAAGACAGGCACTGAGTTAACCAGTAAACATGGTGGAATTGAAGCTAAAGCAAAAGCAACAAAGAAAAAGAATCTCTTTGGTAAGTTCTTTGATTCTTTCGTATTTTTTTGTAGCACCGTTATAATGTTTGCACAAACCACTGAGTTGAAGAAGATAAATGAACATAACTCATCATGTTCAATAGATAACAAGAAAGCCAGAGAGAATGGCTTGATGGTTCACATTTTCAAGATTTTGGGTCAAAATTTCTATCTGGGTTGA

Protein sequence

MLLLSLSHLKILALDCLKSKKRKTQKREREEHKRTLKTGTELTSKHGGIEAKAKATKKKNLFGKFFDSFVFFCSTVIMFAQTTELKKINEHNSSCSIDNKKARENGLMVHIFKILGQNFYLG

Homology

The following BLAST results are available for this feature:

BLAST of PI0002758.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002758.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002758.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002758.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..41

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0002758	PI0002758	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0002758.1-exon	PI0002758.1-exon-chr05:19326358..19326381	exon
PI0002758.1-exon	PI0002758.1-exon-chr05:19326452..19326595	exon
PI0002758.1-exon	PI0002758.1-exon-chr05:19326650..19326714	exon
PI0002758.1-exon	PI0002758.1-exon-chr05:19326783..19326841	exon
PI0002758.1-exon	PI0002758.1-exon-chr05:19326952..19327028	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0002758.1-cds	PI0002758.1-cds-chr05:19326358..19326381	CDS
PI0002758.1-cds	PI0002758.1-cds-chr05:19326452..19326595	CDS
PI0002758.1-cds	PI0002758.1-cds-chr05:19326650..19326714	CDS
PI0002758.1-cds	PI0002758.1-cds-chr05:19326783..19326841	CDS
PI0002758.1-cds	PI0002758.1-cds-chr05:19326952..19327028	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0002758.1	PI0002758.1-protein	polypeptide