Moc11g30250.1 (mRNA) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGGGTGGTCGATAGCTTTGATTTTCATGCACGCGGATGCCATGGACAAGTTTCTGATGGCGTTGGGGTTCATCGGAGCCATTGGTGATGGCTTCCCGAGCCCCTTGATTTTATTTCTCACCAACCGTACGATGAACAACATCGGCTTCACCTCAGACTCTTCTTCAGATTCTTTATAAACCCATATCAATAAGGTCATTTAGTAACTTTAGAAACTGTTAACTCTACTCTATCTGTCGTTTCTAACACTTGGATTTTGTTTGCTTTTTGTGGGCAATAGAATGCCATGGCTCTACTTTACGTAGCTTGTGGGGCATTTGTTGCATGTTTTCTCGGTGGGTTCATTTAATTTCGTTTTTATTTGAATAATTAATGCTGACATTTCAATATCTCATACGATCTCTGTTGTGTGAGGGTTATATATTTTGTAAAAGGAAGTCGGCTATTTCGATCTCCATGTGACCGACACGTTTGAGTTTATCACGTTTGTCTCCAACAACAATTTGGTAATTCAAGACGTTTTAATTAAGCGAAAAGATTAACTTGTTTTCCTCCATTAATTTCTTAGAATGTAGCTCTGATTTGATGATTCATGTATTTTACCATTAATTATGGAATAAAAAATATGACATGTAGTAAGAGCTCCATCAAATCTCCAACTTCACATTAATTTTCTTTTTCTTGTCTAGGAAACCAAAAATTAATCTAGATCCCAAACTTTCTAATGAATGCGGCAGCATTCATCGAGTGCTACATCGCTGTCGTTGCCTTATTCTAGAAACTAGTGATCATGGGATTACCATTCCTGGTGATTCTACTGATCCTAGGCTGCTCTACAATAGAACCCTAACGGGGTTAAAGAGAGAGAGCACGAAATGTTATCTAAAGGCAGGAACATTGGCAAAGCAGGCCATATCCTCCATCAGAGTCGTCTACGCCTTCGTCGTAGAAGACAAAGCGTTATCAAAATATTCGACAGCATTAGGAAGTATGGTAAAGTTGGGGTTGAAGCAAGGACATACAAGAATAGTACACAAGTGAGAGAAAAGGTTGCTATTGCATTTAATTGATTGAAAAGGATGAGTACTCACCTTTATACAAAACAAGTCCTGTCATTAGGGTTTTACAATAAAAGGGAAAATAAGGAGGAAATGATAAATAAAGAATTGAAAAATATGTAAAAAATCTTTACACATGCTGCAATTCTGGTTGACTAACACCTCATTATTATTTTGTTACATCACAGCATCAGCGTAGAAAAGTGTGGATTTCTCTATTTTTTTTTTTGTTTAGCATTTGGTTAATTATCCTATAATTAACTATCTTAACATTCTCCCTCAAATGAGCAGGTAGTTTAGCAACTCCGAGTTTGGACCAAAGTAATTGAAATTGAGAATGAGTAAGAGACTTTGTAAAAAAATCAGCCAATTGATCTAGAAACGAAACATACGGAACCTCAAGAGCAAAGTGCAAAACTTGATATTGAACAAAAAATGAACATTAATTTCAATATGTTTCGTGCGAGCATGAAATATTGGATTAGTAGCTAACGCACCGACATTAGTATTATCACACCATATAATTGGTGTAAAGGGTAGACGTAGGTCAATTTCACCAAGAAGTTGTTGTAGTCAAATAATTTCAGCTGAAGCATGAGCAAGAGCTTGATATTCAAACTCAGTGATAGAGCGCGCATCAACTGTTTCTTTTTACGAGGATCACCACATAAGAGTGTTGCCAATAAATACAGAATAAGATGCAATAACAGACTTGTGATCATCAATATTGGATACCCCGTCAGCATCGGAGTATGCTGTGAGTGACAACGTGTCACTAGGTTGAATGTGAATTCCAGTGTGTTTCCTACCATTCACATAACATATAACTCTTTTAACTGCCTGCAAATGAACTTTAGTAGGTTGCTTCAGAAACTAACTCAAATTATTTACAATATAAGTAATATCTGGTACTAGTGAGATATTGAAGCGCACCAATAGTGCTTCTGTATATAAAGGGGCCACTCAAAGGTTCACCATCGGACAAACATAAATGTTTTCCTAATACTGCTAGGAAAGGTGCACATTTCAAGCCTTTTATATTTAGTTTATGCAAGAAGTCATCAATATATTTGGACTGAGTCAGCAACATTCCATAAGGCATATGAGTTACTTGAAGAAAATAACTAAGTATGCCAAGATCCTTCAAGGCAAACTATTTATCTAAAGTAGCAATTAGTCTGCATATTAACCCAAAATCATTTCTAGTCACTACAACATCATCAACATATACCAGTAAAGAATAAGGGTTGTACCTTGACGATAGATGAATAGAGACGTGTTGGAGTGGCTGTTTGAGAACCCCTAGACTAAGAGAGCAGATTTGAGCGTGATATTCCATGCTCACGACACCTGTTTGAGGTCATAGATTTCTCTATTCATCTTATAGACAAAACTCGAATGTTTCGGATCTTCATATCCTTGAGGCTGTGACATATATACATCCTCATCCAATATGCCATTCAAGAATGCATCTATTAAAATCGAGCTGTCGTATTTGCCACCTATGAGAAACAGCCACCGAGTGAACAACGCGGATAGTCAAAACTTTGACCACTGGACTAAAAGTTTCAAAGAAGTCAACCTCGGAACTCTGATAAAAGCCCTTAGCCACCAATCGAGCCTTATGGTGTTGAATCGAGCCATCCAGATTACATTTGATATGAAAATCTATTTGTATCCAACCACATTCAGGGACAAAGACGGAGGAATAAGATGCCAAGTTTTATTCCGGACAAGAGCATTGTATTTCAGATCCATAGCAGCTTTCCAGACCAGTGTCACAAGTGCATCTTACACCTTTGTGAGTTCAATAATGGCCCAATTAATGGAACTGGGAGACACCAATACTTTTAGTTTGAAGATGCCAGCTTTAGCTCTGGGTAACCATTGGATGAATGGGTAAAGGATGTGTGGGATGAGGAGGAGGGATAAGATTAGGGATAATGGGGGGTGGTATGACATCGGGTAAAGAAGGAGAAGAGCGAAGGGATAGAAAAGACATACCAGATGTGAGGTCATGGTCTGAGATAGACTTAGAGAAATAGGCACCACGTGGCTGGAAGGAGAGGTATTATCATGTGGGAAGGATGAATCATATAACTGGGGTTGTGGCATGAGTGTTCAGGGCCTAGGAGAAGGTTGATTGGGCGAGATATTGGAAGTGGGTTGGGGTTGATGGATTGA ATGAGTGGGTGGTCGATAGCTTTGATTTTCATGCACGCGGATGCCATGGACAAGTTTCTGATGGCGTTGGGGTTCATCGGAGCCATTGGTGATGGCTTCCCGAGCCCCTTGATTTTATTTCTCACCAACCAAACTAGTGATCATGGGATTACCATTCCTGGTGATTCTACTGATCCTAGGCTGCTCTACAATAGAACCCTAACGGGGTTAAAGAGAGAGAGCACGAAATGTTATCTAAAGGCAGGAACATTGGCAAAGCAGGCCATATCCTCCATCAGAGTCGTCTACGCCTTCGTCGTAGAAGACAAAGCGTTATCAAAATATTCGACAGCATTAGGAAGGCCTAGGAGAAGGTTGATTGGGCGAGATATTGGAAGTGGGTTGGGGTTGATGGATTGA ATGAGTGGGTGGTCGATAGCTTTGATTTTCATGCACGCGGATGCCATGGACAAGTTTCTGATGGCGTTGGGGTTCATCGGAGCCATTGGTGATGGCTTCCCGAGCCCCTTGATTTTATTTCTCACCAACCAAACTAGTGATCATGGGATTACCATTCCTGGTGATTCTACTGATCCTAGGCTGCTCTACAATAGAACCCTAACGGGGTTAAAGAGAGAGAGCACGAAATGTTATCTAAAGGCAGGAACATTGGCAAAGCAGGCCATATCCTCCATCAGAGTCGTCTACGCCTTCGTCGTAGAAGACAAAGCGTTATCAAAATATTCGACAGCATTAGGAAGGCCTAGGAGAAGGTTGATTGGGCGAGATATTGGAAGTGGGTTGGGGTTGATGGATTGA MSGWSIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQTSDHGITIPGDSTDPRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTALGRPRRRLIGRDIGSGLGLMD Homology
BLAST of Moc11g30250.1 vs. NCBI nr
Match: EOY03300.1 (ABC transporter family protein isoform 2 [Theobroma cacao]) HSP 1 Score: 89.7 bits (221), Expect = 2.0e-14 Identity = 62/172 (36.05%), Postives = 90/172 (52.33%), Query Frame = 0
BLAST of Moc11g30250.1 vs. NCBI nr
Match: PKI77774.1 (hypothetical protein CRG98_001822 [Punica granatum]) HSP 1 Score: 85.1 bits (209), Expect = 4.9e-13 Identity = 53/132 (40.15%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of Moc11g30250.1 vs. NCBI nr
Match: XP_022133729.1 (ABC transporter B family member 15-like, partial [Momordica charantia]) HSP 1 Score: 83.2 bits (204), Expect = 1.9e-12 Identity = 71/257 (27.63%), Postives = 94/257 (36.58%), Query Frame = 0
BLAST of Moc11g30250.1 vs. NCBI nr
Match: KAB1211633.1 (ABC transporter B family member 15 [Morella rubra]) HSP 1 Score: 83.2 bits (204), Expect = 1.9e-12 Identity = 55/157 (35.03%), Postives = 77/157 (49.04%), Query Frame = 0
BLAST of Moc11g30250.1 vs. NCBI nr
Match: XP_004142341.1 (ABC transporter B family member 15 [Cucumis sativus] >KGN52419.1 hypothetical protein Csa_008385 [Cucumis sativus]) HSP 1 Score: 82.0 bits (201), Expect = 4.1e-12 Identity = 74/253 (29.25%), Postives = 93/253 (36.76%), Query Frame = 0
BLAST of Moc11g30250.1 vs. ExPASy Swiss-Prot
Match: Q9LSJ8 (ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0
HSP 2 Score: 51.2 bits (121), Expect = 1.0e-05 Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0
BLAST of Moc11g30250.1 vs. ExPASy Swiss-Prot
Match: Q9LJX0 (ABC transporter B family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCB19 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 38/106 (35.85%), Postives = 54/106 (50.94%), Query Frame = 0
BLAST of Moc11g30250.1 vs. ExPASy Swiss-Prot
Match: Q9LSJ6 (ABC transporter B family member 17 OS=Arabidopsis thaliana OX=3702 GN=ABCB17 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.2e-07 Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of Moc11g30250.1 vs. ExPASy Swiss-Prot
Match: Q9LHD1 (ABC transporter B family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCB15 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 9.3e-07 Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Moc11g30250.1 vs. ExPASy Swiss-Prot
Match: Q6YUU5 (Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0190300 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.7e-06 Identity = 37/119 (31.09%), Postives = 59/119 (49.58%), Query Frame = 0
BLAST of Moc11g30250.1 vs. ExPASy TrEMBL
Match: A0A061EE90 (ABC transporter family protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_018162 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 9.6e-15 Identity = 62/172 (36.05%), Postives = 90/172 (52.33%), Query Frame = 0
BLAST of Moc11g30250.1 vs. ExPASy TrEMBL
Match: A0A2I0LAQ5 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_001822 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.4e-13 Identity = 53/132 (40.15%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of Moc11g30250.1 vs. ExPASy TrEMBL
Match: A0A6A1VFZ4 (ABC transporter B family member 15 OS=Morella rubra OX=262757 GN=CJ030_MR6G008517 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 9.0e-13 Identity = 55/157 (35.03%), Postives = 77/157 (49.04%), Query Frame = 0
BLAST of Moc11g30250.1 vs. ExPASy TrEMBL
Match: A0A6J1BWU3 (ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111006245 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 9.0e-13 Identity = 71/257 (27.63%), Postives = 94/257 (36.58%), Query Frame = 0
BLAST of Moc11g30250.1 vs. ExPASy TrEMBL
Match: A0A0A0KU14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633170 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 2.0e-12 Identity = 74/253 (29.25%), Postives = 93/253 (36.76%), Query Frame = 0
BLAST of Moc11g30250.1 vs. TAIR 10
Match: AT3G28860.1 (ATP binding cassette subfamily B19 ) HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08 Identity = 38/106 (35.85%), Postives = 54/106 (50.94%), Query Frame = 0
BLAST of Moc11g30250.1 vs. TAIR 10
Match: AT3G28360.1 (P-glycoprotein 16 ) HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08 Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0
HSP 2 Score: 51.2 bits (121), Expect = 7.3e-07 Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0
BLAST of Moc11g30250.1 vs. TAIR 10
Match: AT3G28380.1 (P-glycoprotein 17 ) HSP 1 Score: 55.8 bits (133), Expect = 3.0e-08 Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of Moc11g30250.1 vs. TAIR 10
Match: AT3G28345.1 (ABC transporter family protein ) HSP 1 Score: 54.7 bits (130), Expect = 6.6e-08 Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Moc11g30250.1 vs. TAIR 10
Match: AT3G28390.1 (P-glycoprotein 18 ) HSP 1 Score: 52.8 bits (125), Expect = 2.5e-07 Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0
HSP 2 Score: 50.1 bits (118), Expect = 1.6e-06 Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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