Moc11g30250 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g30250
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ABC transporter B family member 15-like
Location	chr11: 22095452 .. 22098697 (-)
RNA-Seq Expression	Moc11g30250
Synteny	Moc11g30250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGGTGGTCGATAGCTTTGATTTTCATGCACGCGGATGCCATGGACAAGTTTCTGATGGCGTTGGGGTTCATCGGAGCCATTGGTGATGGCTTCCCGAGCCCCTTGATTTTATTTCTCACCAACCGTACGATGAACAACATCGGCTTCACCTCAGACTCTTCTTCAGATTCTTTATAAACCCATATCAATAAGGTCATTTAGTAACTTTAGAAACTGTTAACTCTACTCTATCTGTCGTTTCTAACACTTGGATTTTGTTTGCTTTTTGTGGGCAATAGAATGCCATGGCTCTACTTTACGTAGCTTGTGGGGCATTTGTTGCATGTTTTCTCGGTGGGTTCATTTAATTTCGTTTTTATTTGAATAATTAATGCTGACATTTCAATATCTCATACGATCTCTGTTGTGTGAGGGTTATATATTTTGTAAAAGGAAGTCGGCTATTTCGATCTCCATGTGACCGACACGTTTGAGTTTATCACGTTTGTCTCCAACAACAATTTGGTAATTCAAGACGTTTTAATTAAGCGAAAAGATTAACTTGTTTTCCTCCATTAATTTCTTAGAATGTAGCTCTGATTTGATGATTCATGTATTTTACCATTAATTATGGAATAAAAAATATGACATGTAGTAAGAGCTCCATCAAATCTCCAACTTCACATTAATTTTCTTTTTCTTGTCTAGGAAACCAAAAATTAATCTAGATCCCAAACTTTCTAATGAATGCGGCAGCATTCATCGAGTGCTACATCGCTGTCGTTGCCTTATTCTAGAAACTAGTGATCATGGGATTACCATTCCTGGTGATTCTACTGATCCTAGGCTGCTCTACAATAGAACCCTAACGGGGTTAAAGAGAGAGAGCACGAAATGTTATCTAAAGGCAGGAACATTGGCAAAGCAGGCCATATCCTCCATCAGAGTCGTCTACGCCTTCGTCGTAGAAGACAAAGCGTTATCAAAATATTCGACAGCATTAGGAAGTATGGTAAAGTTGGGGTTGAAGCAAGGACATACAAGAATAGTACACAAGTGAGAGAAAAGGTTGCTATTGCATTTAATTGATTGAAAAGGATGAGTACTCACCTTTATACAAAACAAGTCCTGTCATTAGGGTTTTACAATAAAAGGGAAAATAAGGAGGAAATGATAAATAAAGAATTGAAAAATATGTAAAAAATCTTTACACATGCTGCAATTCTGGTTGACTAACACCTCATTATTATTTTGTTACATCACAGCATCAGCGTAGAAAAGTGTGGATTTCTCTATTTTTTTTTTTGTTTAGCATTTGGTTAATTATCCTATAATTAACTATCTTAACATTCTCCCTCAAATGAGCAGGTAGTTTAGCAACTCCGAGTTTGGACCAAAGTAATTGAAATTGAGAATGAGTAAGAGACTTTGTAAAAAAATCAGCCAATTGATCTAGAAACGAAACATACGGAACCTCAAGAGCAAAGTGCAAAACTTGATATTGAACAAAAAATGAACATTAATTTCAATATGTTTCGTGCGAGCATGAAATATTGGATTAGTAGCTAACGCACCGACATTAGTATTATCACACCATATAATTGGTGTAAAGGGTAGACGTAGGTCAATTTCACCAAGAAGTTGTTGTAGTCAAATAATTTCAGCTGAAGCATGAGCAAGAGCTTGATATTCAAACTCAGTGATAGAGCGCGCATCAACTGTTTCTTTTTACGAGGATCACCACATAAGAGTGTTGCCAATAAATACAGAATAAGATGCAATAACAGACTTGTGATCATCAATATTGGATACCCCGTCAGCATCGGAGTATGCTGTGAGTGACAACGTGTCACTAGGTTGAATGTGAATTCCAGTGTGTTTCCTACCATTCACATAACATATAACTCTTTTAACTGCCTGCAAATGAACTTTAGTAGGTTGCTTCAGAAACTAACTCAAATTATTTACAATATAAGTAATATCTGGTACTAGTGAGATATTGAAGCGCACCAATAGTGCTTCTGTATATAAAGGGGCCACTCAAAGGTTCACCATCGGACAAACATAAATGTTTTCCTAATACTGCTAGGAAAGGTGCACATTTCAAGCCTTTTATATTTAGTTTATGCAAGAAGTCATCAATATATTTGGACTGAGTCAGCAACATTCCATAAGGCATATGAGTTACTTGAAGAAAATAACTAAGTATGCCAAGATCCTTCAAGGCAAACTATTTATCTAAAGTAGCAATTAGTCTGCATATTAACCCAAAATCATTTCTAGTCACTACAACATCATCAACATATACCAGTAAAGAATAAGGGTTGTACCTTGACGATAGATGAATAGAGACGTGTTGGAGTGGCTGTTTGAGAACCCCTAGACTAAGAGAGCAGATTTGAGCGTGATATTCCATGCTCACGACACCTGTTTGAGGTCATAGATTTCTCTATTCATCTTATAGACAAAACTCGAATGTTTCGGATCTTCATATCCTTGAGGCTGTGACATATATACATCCTCATCCAATATGCCATTCAAGAATGCATCTATTAAAATCGAGCTGTCGTATTTGCCACCTATGAGAAACAGCCACCGAGTGAACAACGCGGATAGTCAAAACTTTGACCACTGGACTAAAAGTTTCAAAGAAGTCAACCTCGGAACTCTGATAAAAGCCCTTAGCCACCAATCGAGCCTTATGGTGTTGAATCGAGCCATCCAGATTACATTTGATATGAAAATCTATTTGTATCCAACCACATTCAGGGACAAAGACGGAGGAATAAGATGCCAAGTTTTATTCCGGACAAGAGCATTGTATTTCAGATCCATAGCAGCTTTCCAGACCAGTGTCACAAGTGCATCTTACACCTTTGTGAGTTCAATAATGGCCCAATTAATGGAACTGGGAGACACCAATACTTTTAGTTTGAAGATGCCAGCTTTAGCTCTGGGTAACCATTGGATGAATGGGTAAAGGATGTGTGGGATGAGGAGGAGGGATAAGATTAGGGATAATGGGGGGTGGTATGACATCGGGTAAAGAAGGAGAAGAGCGAAGGGATAGAAAAGACATACCAGATGTGAGGTCATGGTCTGAGATAGACTTAGAGAAATAGGCACCACGTGGCTGGAAGGAGAGGTATTATCATGTGGGAAGGATGAATCATATAACTGGGGTTGTGGCATGAGTGTTCAGGGCCTAGGAGAAGGTTGATTGGGCGAGATATTGGAAGTGGGTTGGGGTTGATGGATTGA

mRNA sequence

ATGAGTGGGTGGTCGATAGCTTTGATTTTCATGCACGCGGATGCCATGGACAAGTTTCTGATGGCGTTGGGGTTCATCGGAGCCATTGGTGATGGCTTCCCGAGCCCCTTGATTTTATTTCTCACCAACCAAACTAGTGATCATGGGATTACCATTCCTGGTGATTCTACTGATCCTAGGCTGCTCTACAATAGAACCCTAACGGGGTTAAAGAGAGAGAGCACGAAATGTTATCTAAAGGCAGGAACATTGGCAAAGCAGGCCATATCCTCCATCAGAGTCGTCTACGCCTTCGTCGTAGAAGACAAAGCGTTATCAAAATATTCGACAGCATTAGGAAGGCCTAGGAGAAGGTTGATTGGGCGAGATATTGGAAGTGGGTTGGGGTTGATGGATTGA

Coding sequence (CDS)

ATGAGTGGGTGGTCGATAGCTTTGATTTTCATGCACGCGGATGCCATGGACAAGTTTCTGATGGCGTTGGGGTTCATCGGAGCCATTGGTGATGGCTTCCCGAGCCCCTTGATTTTATTTCTCACCAACCAAACTAGTGATCATGGGATTACCATTCCTGGTGATTCTACTGATCCTAGGCTGCTCTACAATAGAACCCTAACGGGGTTAAAGAGAGAGAGCACGAAATGTTATCTAAAGGCAGGAACATTGGCAAAGCAGGCCATATCCTCCATCAGAGTCGTCTACGCCTTCGTCGTAGAAGACAAAGCGTTATCAAAATATTCGACAGCATTAGGAAGGCCTAGGAGAAGGTTGATTGGGCGAGATATTGGAAGTGGGTTGGGGTTGATGGATTGA

Protein sequence

MSGWSIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQTSDHGITIPGDSTDPRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTALGRPRRRLIGRDIGSGLGLMD

Homology

[Close]

BLAST of Moc11g30250 vs. NCBI nr
Match: EOY03300.1 (ABC transporter family protein isoform 2 [Theobroma cacao])

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-14
Identity = 62/172 (36.05%), Postives = 90/172 (52.33%), Query Frame = 0


Query: 5   SIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQ-----------TSD---HGI 64
           SI  IFMHAD +D +LM LGFIGAIGDGF +PL+L +T++           T+D   H I
Sbjct: 17  SIRSIFMHADGVDMWLMTLGFIGAIGDGFSTPLVLLVTSKLMNNLGDASAFTADMFTHNI 76

Query: 65  -TIPGDSTD-------------------------------PRLLYNRTLTGLKRESTKCY 124
             +P    +                               P L+Y R L G+ R++ + Y
Sbjct: 77  HKVPNFLMNVAIFVGCYMVAFIMLWRLAIVGFPFAVLLVIPGLMYGRGLIGIARKTREEY 136

Query: 125 LKAGTLAKQAISSIRVVYAFVVEDKALSKYSTALGRPRRRLIGRDIGSGLGL 131
            KAGT+A+QAISSIR VY+FV E+K ++++S AL    +  + + +  GL +
Sbjct: 137 NKAGTIAEQAISSIRTVYSFVGENKTIAEFSAALQGSLKLGLRQGLAKGLAI 188

[Close]

BLAST of Moc11g30250 vs. NCBI nr
Match: PKI77774.1 (hypothetical protein CRG98_001822 [Punica granatum])

HSP 1 Score: 85.1 bits (209), Expect = 4.9e-13
Identity = 53/132 (40.15%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 4   WSIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQTSDHGITIPGDSTD----- 63
           WS+  +FMHA+ +DKFLMALG +GA+ +GF  P++LF+T    DH I   G S       
Sbjct: 23  WSLRSVFMHANRVDKFLMALGLVGAVCNGFSMPVVLFVT----DHLINAIGTSPSLDSEV 82

Query: 64  --PRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTALGRPR 123
               +   RTL  + R+  K Y  A T+A+QA+SSI+ VYAFV   K +SK+        
Sbjct: 83  FRDSMNKGRTLMRIARKIRKEYNMASTIAEQAVSSIQTVYAFVGVTKTMSKFPER--HDI 142

Query: 124 RRLIGRDIGSGL 129
           R  + + +GS L
Sbjct: 143 RNFLDKALGSAL 148

[Close]

BLAST of Moc11g30250 vs. NCBI nr
Match: XP_022133729.1 (ABC transporter B family member 15-like, partial [Momordica charantia])

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-12
Identity = 71/257 (27.63%), Postives = 94/257 (36.58%), Query Frame = 0


Query: 2   SGWSIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQTSDH-GITIPGDSTD-- 61
           SGWSI  IFMHADA+DKFLMALGFIGA+GDG  +PL+L ++++  ++ G     D +D  
Sbjct: 21  SGWSITSIFMHADAVDKFLMALGFIGAMGDGLTTPLVLVVSSRLMNNIGFASSSDPSDIS 80

Query: 62  ------------------------------------------------------------ 121
                                                                       
Sbjct: 81  HSFQTNIDKNAVALLYVACGGFLACFLEGYCWTRTGERQSARMRARYLRAVLRQEVGYFD 140

Query: 122 ------------------------------------------------------------ 131
                                                                       
Sbjct: 141 LHVTSTSEVITSVSNDSLVIQDVFSEKIPNFLMNAAMFVGSYIAAVVLFWRLALVGFPFV 200

[Close]

BLAST of Moc11g30250 vs. NCBI nr
Match: KAB1211633.1 (ABC transporter B family member 15 [Morella rubra])

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-12
Identity = 55/157 (35.03%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 5   SIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQTSDHGITIPGDSTD------ 64
           SI  IFMHAD++D +LM LGF+G++GDG  +PL+LF++++  +    I G S+       
Sbjct: 16  SIRTIFMHADSVDLWLMGLGFLGSVGDGLSTPLVLFISSRMMN---DIGGASSSFTESFQ 75

Query: 65  -------------------------------------------PRLLYNRTLTGLKREST 113
                                                      P L+Y RTL GL R+  
Sbjct: 76  RNINWVPNFLMNVSTFTGNYIAAFVLLWRLAIVAFPFIVLLVIPGLIYGRTLMGLARKIR 135

[Close]

BLAST of Moc11g30250 vs. NCBI nr
Match: XP_004142341.1 (ABC transporter B family member 15 [Cucumis sativus] >KGN52419.1 hypothetical protein Csa_008385 [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 4.1e-12
Identity = 74/253 (29.25%), Postives = 93/253 (36.76%), Query Frame = 0


Query: 3   GWSIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTN-------QTSDHGIT---- 62
           GW +A IFMHADA+DKFLM LGFIGA+GDGF +PL+L +++        TS   IT    
Sbjct: 23  GWWMASIFMHADAVDKFLMTLGFIGAVGDGFTTPLVLVVSSHLMNNIGHTSSSSITDSFV 82

Query: 63  ------------------------------------------------------------ 122
                                                                       
Sbjct: 83  ANIDKNAVALLYVACGGFVSCFLEGYCWTRTGERQAARMRARYLKAVLRQDVGYFDLHVT 142

Query: 123 -----IPGDSTD------------------------------------------------ 131
                I   S D                                                
Sbjct: 143 STSEVITSVSNDSLVIQDVLSEKIPNFLMNAAIFIGSYLAAVILFWRLAVVGFPFVVLLV 202

[Close]

BLAST of Moc11g30250 vs. ExPASy Swiss-Prot
Match: Q9LSJ8 (ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 59  PRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTAL 113
           P L+Y R L G+ R+  + Y +AG++A+QAISS+R VYAFV E K + K+S AL
Sbjct: 183 PGLMYGRALIGISRKIREEYNEAGSIAEQAISSVRTVYAFVSEKKMIEKFSDAL 236

HSP 2 Score: 51.2 bits (121), Expect = 1.0e-05
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 1  MSGW-SIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLT 43
          M  W S+  IFMHAD +D  LM LG IGA+GDGF +P++ F+T
Sbjct: 1  MKTWGSMRSIFMHADGVDWMLMGLGLIGAVGDGFITPILFFIT 43

[Close]

BLAST of Moc11g30250 vs. ExPASy Swiss-Prot
Match: Q9LJX0 (ABC transporter B family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCB19 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 38/106 (35.85%), Postives = 54/106 (50.94%), Query Frame = 0


Query: 25  FIGAIGDGFPSPLILFLTNQTSDHGITIPGDSTDPRLLYNRTLTGLKRESTKCYLKAGTL 84
           F+  +  GF S   L L +     GI   G       LY  TLTG+  +S + Y  AG +
Sbjct: 173 FLAGLVVGFVSAWKLALLSVAVIPGIAFAGG------LYAYTLTGITSKSRESYANAGVI 232

Query: 85  AKQAISSIRVVYAFVVEDKALSKYSTALGRPRRRLIGRDIGSGLGL 131
           A+QAI+ +R VY++V E KAL+ YS A+    +      +  GLGL
Sbjct: 233 AEQAIAQVRTVYSYVGESKALNAYSDAIQYTLKLGYKAGMAKGLGL 272

[Close]

BLAST of Moc11g30250 vs. ExPASy Swiss-Prot
Match: Q9LSJ6 (ABC transporter B family member 17 OS=Arabidopsis thaliana OX=3702 GN=ABCB17 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.2e-07
Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 59  PRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTAL 113
           P L+Y R L  + R+  + Y +AG++A+QAISS+R VYAF  E+K + K+STAL
Sbjct: 196 PGLMYGRALVSISRKIHEQYNEAGSIAEQAISSVRTVYAFGSENKMIGKFSTAL 249

[Close]

BLAST of Moc11g30250 vs. ExPASy Swiss-Prot
Match: Q9LHD1 (ABC transporter B family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCB15 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.3e-07
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 59  PRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTAL 113
           P L+Y R L  + R+  + Y +AG +A+QAISS+R VYAF  E K +SK+STAL
Sbjct: 196 PGLMYGRALISISRKIREEYNEAGFVAEQAISSVRTVYAFSGERKTISKFSTAL 249

[Close]

BLAST of Moc11g30250 vs. ExPASy Swiss-Prot
Match: Q6YUU5 (Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0190300 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-06
Identity = 37/119 (31.09%), Postives = 59/119 (49.58%), Query Frame = 0


Query: 13  ADAMDKFLM-ALGFIGAIGDGFPSPLILFLTNQTSDHGITIPGDSTDPRLLYNRTLTGLK 72
           ++ +  F+M A  F G+   GF     L L    S   + IPG       +Y R L GL 
Sbjct: 155 SEKVPNFVMNAAMFAGSYAVGFALLWRLTLVALPSVVLLIIPG------FMYGRILVGLA 214

Query: 73  RESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTALGRPRRRLIGRDIGSGLGL 131
           R   + Y + G +A+QA+SS R VY+FV E   ++++S AL    R  + + +  G+ +
Sbjct: 215 RRIREQYTRPGAIAEQAVSSARTVYSFVAERTTMAQFSAALEESARLGLKQGLAKGIAV 267

[Close]

BLAST of Moc11g30250 vs. ExPASy TrEMBL
Match: A0A061EE90 (ABC transporter family protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_018162 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 9.6e-15
Identity = 62/172 (36.05%), Postives = 90/172 (52.33%), Query Frame = 0


Query: 5   SIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQ-----------TSD---HGI 64
           SI  IFMHAD +D +LM LGFIGAIGDGF +PL+L +T++           T+D   H I
Sbjct: 17  SIRSIFMHADGVDMWLMTLGFIGAIGDGFSTPLVLLVTSKLMNNLGDASAFTADMFTHNI 76

Query: 65  -TIPGDSTD-------------------------------PRLLYNRTLTGLKRESTKCY 124
             +P    +                               P L+Y R L G+ R++ + Y
Sbjct: 77  HKVPNFLMNVAIFVGCYMVAFIMLWRLAIVGFPFAVLLVIPGLMYGRGLIGIARKTREEY 136

Query: 125 LKAGTLAKQAISSIRVVYAFVVEDKALSKYSTALGRPRRRLIGRDIGSGLGL 131
            KAGT+A+QAISSIR VY+FV E+K ++++S AL    +  + + +  GL +
Sbjct: 137 NKAGTIAEQAISSIRTVYSFVGENKTIAEFSAALQGSLKLGLRQGLAKGLAI 188

[Close]

BLAST of Moc11g30250 vs. ExPASy TrEMBL
Match: A0A2I0LAQ5 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_001822 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.4e-13
Identity = 53/132 (40.15%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 4   WSIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQTSDHGITIPGDSTD----- 63
           WS+  +FMHA+ +DKFLMALG +GA+ +GF  P++LF+T    DH I   G S       
Sbjct: 23  WSLRSVFMHANRVDKFLMALGLVGAVCNGFSMPVVLFVT----DHLINAIGTSPSLDSEV 82

Query: 64  --PRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTALGRPR 123
               +   RTL  + R+  K Y  A T+A+QA+SSI+ VYAFV   K +SK+        
Sbjct: 83  FRDSMNKGRTLMRIARKIRKEYNMASTIAEQAVSSIQTVYAFVGVTKTMSKFPER--HDI 142

Query: 124 RRLIGRDIGSGL 129
           R  + + +GS L
Sbjct: 143 RNFLDKALGSAL 148

[Close]

BLAST of Moc11g30250 vs. ExPASy TrEMBL
Match: A0A6A1VFZ4 (ABC transporter B family member 15 OS=Morella rubra OX=262757 GN=CJ030_MR6G008517 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 9.0e-13
Identity = 55/157 (35.03%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 5   SIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQTSDHGITIPGDSTD------ 64
           SI  IFMHAD++D +LM LGF+G++GDG  +PL+LF++++  +    I G S+       
Sbjct: 16  SIRTIFMHADSVDLWLMGLGFLGSVGDGLSTPLVLFISSRMMN---DIGGASSSFTESFQ 75

Query: 65  -------------------------------------------PRLLYNRTLTGLKREST 113
                                                      P L+Y RTL GL R+  
Sbjct: 76  RNINWVPNFLMNVSTFTGNYIAAFVLLWRLAIVAFPFIVLLVIPGLIYGRTLMGLARKIR 135

[Close]

BLAST of Moc11g30250 vs. ExPASy TrEMBL
Match: A0A6J1BWU3 (ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111006245 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 9.0e-13
Identity = 71/257 (27.63%), Postives = 94/257 (36.58%), Query Frame = 0


Query: 2   SGWSIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQTSDH-GITIPGDSTD-- 61
           SGWSI  IFMHADA+DKFLMALGFIGA+GDG  +PL+L ++++  ++ G     D +D  
Sbjct: 21  SGWSITSIFMHADAVDKFLMALGFIGAMGDGLTTPLVLVVSSRLMNNIGFASSSDPSDIS 80

Query: 62  ------------------------------------------------------------ 121
                                                                       
Sbjct: 81  HSFQTNIDKNAVALLYVACGGFLACFLEGYCWTRTGERQSARMRARYLRAVLRQEVGYFD 140

Query: 122 ------------------------------------------------------------ 131
                                                                       
Sbjct: 141 LHVTSTSEVITSVSNDSLVIQDVFSEKIPNFLMNAAMFVGSYIAAVVLFWRLALVGFPFV 200

[Close]

BLAST of Moc11g30250 vs. ExPASy TrEMBL
Match: A0A0A0KU14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633170 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.0e-12
Identity = 74/253 (29.25%), Postives = 93/253 (36.76%), Query Frame = 0


Query: 3   GWSIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTN-------QTSDHGIT---- 62
           GW +A IFMHADA+DKFLM LGFIGA+GDGF +PL+L +++        TS   IT    
Sbjct: 23  GWWMASIFMHADAVDKFLMTLGFIGAVGDGFTTPLVLVVSSHLMNNIGHTSSSSITDSFV 82

Query: 63  ------------------------------------------------------------ 122
                                                                       
Sbjct: 83  ANIDKNAVALLYVACGGFVSCFLEGYCWTRTGERQAARMRARYLKAVLRQDVGYFDLHVT 142

Query: 123 -----IPGDSTD------------------------------------------------ 131
                I   S D                                                
Sbjct: 143 STSEVITSVSNDSLVIQDVLSEKIPNFLMNAAIFIGSYLAAVILFWRLAVVGFPFVVLLV 202

[Close]

BLAST of Moc11g30250 vs. TAIR 10
Match: AT3G28860.1 (ATP binding cassette subfamily B19 )

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08
Identity = 38/106 (35.85%), Postives = 54/106 (50.94%), Query Frame = 0


Query: 25  FIGAIGDGFPSPLILFLTNQTSDHGITIPGDSTDPRLLYNRTLTGLKRESTKCYLKAGTL 84
           F+  +  GF S   L L +     GI   G       LY  TLTG+  +S + Y  AG +
Sbjct: 173 FLAGLVVGFVSAWKLALLSVAVIPGIAFAGG------LYAYTLTGITSKSRESYANAGVI 232

Query: 85  AKQAISSIRVVYAFVVEDKALSKYSTALGRPRRRLIGRDIGSGLGL 131
           A+QAI+ +R VY++V E KAL+ YS A+    +      +  GLGL
Sbjct: 233 AEQAIAQVRTVYSYVGESKALNAYSDAIQYTLKLGYKAGMAKGLGL 272

[Close]

BLAST of Moc11g30250 vs. TAIR 10
Match: AT3G28360.1 (P-glycoprotein 16 )

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 59  PRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTAL 113
           P L+Y R L G+ R+  + Y +AG++A+QAISS+R VYAFV E K + K+S AL
Sbjct: 183 PGLMYGRALIGISRKIREEYNEAGSIAEQAISSVRTVYAFVSEKKMIEKFSDAL 236

HSP 2 Score: 51.2 bits (121), Expect = 7.3e-07
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 1  MSGW-SIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLT 43
          M  W S+  IFMHAD +D  LM LG IGA+GDGF +P++ F+T
Sbjct: 1  MKTWGSMRSIFMHADGVDWMLMGLGLIGAVGDGFITPILFFIT 43

[Close]

BLAST of Moc11g30250 vs. TAIR 10
Match: AT3G28380.1 (P-glycoprotein 17 )

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-08
Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 59  PRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTAL 113
           P L+Y R L  + R+  + Y +AG++A+QAISS+R VYAF  E+K + K+STAL
Sbjct: 196 PGLMYGRALVSISRKIHEQYNEAGSIAEQAISSVRTVYAFGSENKMIGKFSTAL 249

[Close]

BLAST of Moc11g30250 vs. TAIR 10
Match: AT3G28345.1 (ABC transporter family protein )

HSP 1 Score: 54.7 bits (130), Expect = 6.6e-08
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 59  PRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTAL 113
           P L+Y R L  + R+  + Y +AG +A+QAISS+R VYAF  E K +SK+STAL
Sbjct: 196 PGLMYGRALISISRKIREEYNEAGFVAEQAISSVRTVYAFSGERKTISKFSTAL 249

[Close]

BLAST of Moc11g30250 vs. TAIR 10
Match: AT3G28390.1 (P-glycoprotein 18 )

HSP 1 Score: 52.8 bits (125), Expect = 2.5e-07
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 5  SIALIFMHADAMDKFLMALGFIGAIGDGFPSPLILFLTNQ 45
          SI  IFMHAD +D  LMALG IGA+GDGF +P+I F+ ++
Sbjct: 7  SIRSIFMHADGVDWMLMALGLIGAVGDGFITPIIFFICSK 46

HSP 2 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 59  PRLLYNRTLTGLKRESTKCYLKAGTLAKQAISSIRVVYAFVVEDKALSKYSTAL 113
           P L+Y R L  +  +  + Y +AG++A+Q ISS+R VYAF  E K + K+STAL
Sbjct: 184 PGLMYGRALIRISMKIREEYNEAGSIAEQVISSVRTVYAFGSEKKMIEKFSTAL 237

The following BLAST results are available for this feature:

BLAST of Moc11g30250 vs. NCBI nr


Match Name	E-value	Identity	Description
EOY03300.1	2.0e-14	36.05	ABC transporter family protein isoform 2 [Theobroma cacao]	[more]
PKI77774.1	4.9e-13	40.15	hypothetical protein CRG98_001822 [Punica granatum]	[more]
XP_022133729.1	1.9e-12	27.63	ABC transporter B family member 15-like, partial [Momordica charantia]	[more]
KAB1211633.1	1.9e-12	35.03	ABC transporter B family member 15 [Morella rubra]	[more]
XP_004142341.1	4.1e-12	29.25	ABC transporter B family member 15 [Cucumis sativus] >KGN52419.1 hypothetical pr...	[more]

BLAST of Moc11g30250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSJ8	1.4e-07	51.85	ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=...	[more]
Q9LJX0	1.4e-07	35.85	ABC transporter B family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCB19 PE=...	[more]
Q9LSJ6	4.2e-07	50.00	ABC transporter B family member 17 OS=Arabidopsis thaliana OX=3702 GN=ABCB17 PE=...	[more]
Q9LHD1	9.3e-07	51.85	ABC transporter B family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCB15 PE=...	[more]
Q6YUU5	2.7e-06	31.09	Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Moc11g30250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A061EE90	9.6e-15	36.05	ABC transporter family protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_01816...	[more]
A0A2I0LAQ5	2.4e-13	40.15	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_001822 PE=4 SV=1	[more]
A0A6A1VFZ4	9.0e-13	35.03	ABC transporter B family member 15 OS=Morella rubra OX=262757 GN=CJ030_MR6G00851...	[more]
A0A6J1BWU3	9.0e-13	27.63	ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0KU14	2.0e-12	29.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633170 PE=4 SV=1	[more]

BLAST of Moc11g30250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28860.1	1.0e-08	35.85	ATP binding cassette subfamily B19	[more]
AT3G28360.1	1.0e-08	51.85	P-glycoprotein 16	[more]
AT3G28380.1	3.0e-08	50.00	P-glycoprotein 17	[more]
AT3G28345.1	6.6e-08	51.85	ABC transporter family protein	[more]
AT3G28390.1	2.5e-07	60.00	P-glycoprotein 18	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036640	ABC transporter type 1, transmembrane domain superfamily	GENE3D	1.20.1560.10	ABC transporter type 1, transmembrane domain	coord: 58..131 e-value: 2.6E-8 score: 34.5
IPR036640	ABC transporter type 1, transmembrane domain superfamily	SUPERFAMILY	90123	ABC transporter transmembrane region	coord: 61..119
None	No IPR available	PANTHER	PTHR24222	ABC TRANSPORTER B FAMILY	coord: 6..44 coord: 61..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g30250.1	Moc11g30250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding