Moc11g29230.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g29230.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ribosomal RNA processing protein 36 homolog
Location	chr11: 21280909 .. 21285859 (+)
Sequence length	1122
RNA-Seq Expression	Moc11g29230.1
Synteny	Moc11g29230.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAAAGTACCTACTCCTGCTCGTGGCCCTAGGCGTAGAGGACGACGTCAAGTAGATCAAGATGCTCCAGTAGGACTTGACGATCCCGTACCTGAAGTTATCTATCATAGAGTTGAAGACATTCCACCATTTACACAGACAAAGGATGATGCTGGTCTGTCCACGCCTATGGTCATGATATCGACTCCTGGTTCTAGTCAGTATCACACACCATCTTCGCCGCTGCAGTATGGCTATGGATGGGGCCATGGACGTGGACGTGGAGAGCATGGACAATACTTCAACCCTACGGAAGATCGAGACCGTACAGAGAGTCAAGAGACACCAGCGGCACCACTAGTTCGTCGTCTGCCACATCGTAACCGGCGACGTCTCCATTGTGGAACGGATTAGATCGATAGACTGTAAATTGACGAACTACAAACATTGTTCTCTTATTTATAATATTAATTTCCAATTTTGAACTAACATGGATAACTTCATGATTATATAAGAAAATCATAAAATCATAATTTTTGTTTACACAACATAATATAGTTAATAATAAAACTTATTTTAAAAATATAGTTAATAATATATTTGAGGGGATTTTTTAATTAATATAGTTAATAATAACTAGACATTAAAGTGAATTTTTAGTTAATAAATAAATAAATATACCCAATCATTTGTATTTTATTTAAAAATATTTAAAACCCTAAACAAAAAATAATGTGGTAAGAGACGACCACGATTAATAAAAAAATAAATAAATGAGATGGTCGAAGAGACGACCATCTCTAAAACAAATTACGTGGCGTGCATGGTGGCGCCACGTTGTATGGTCGTCTAAGAGACAACCATGTTGGATGGTCGAGCTACACTTTTTTATAACCACTATATTTTTAAAAAAAGTTTCAAAACATACCATATTTTAAACAATTTTAATTAAAATACAATATTTTTAAAATTACTTTTATTATTAACATTATTAATAAAAAACACCTGAAGAGATGTGAGAGGAGGGGTAGAGAGGGATTGTATAGTGGTGCTTCCTTTTCTCGTTTTTTTTCTTTTTTCTTATAATAAATTAATAATAATAATAATATTATTATTTAAATTCATTTATTTATTTCAATTTTTACCATTGATGCGTATTTTTATTCCTGTTGATTTTTTTTAACCTTAGATCTATTTTTCTTTTCAAATTTAATGACAAATTTTCAAATCAATGCTTCAATTTCTAATAACTCAATTTAATCATCATATGCATGTATGTATATATCAATATTTCATATTTGGTTCAATTATATAACAAATATTAGATTTGGTTATAAATTATTAATAAAACATGATTTCAATTTACTAATTCAAATTATTTTCATCCATTTTCGTTATCTTGTTCCGACATTTCTATCGACATCAACATTTTCATAAGTTACTAATATTTTTACATATAATGGATAAAAAGTGATCAATTATAATTTAATTAAGCTACAATTAAAGTTTTATTTACTAATTAAAATAATTTTTATTAATTTCCATAATTTTCATAATTTTCACCAAATATCCATCGACAACGACATTTTAAACCTTGGTCTGCATCTCTTTTATTTTGACACTTCTTTTTAAAAGCTTTTTCTGGTAAACCAAACTCGAGGTGAATCGAACCGAACCAGCAAAGCAGACCAAACGGGTAAGTTAGACCGAACTGCTAAACTGGACCAAACCAAAGAGAACCAGACCTCACACAAACCCTAACAACAAGATGTCCCTATAATTCACAGCAACCCGATCGGATATCTGCAGCAAATCCGAACGCCGGAGACGAACGGAGCAACAGCCGCGTGGAGTCTTGTGGTAGCGGCAGGCACAAACGGTTATCAAAGCATTTGTGAATTAGGGCAAATAAATGGAATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTTGAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGTATCTTTTGAGCTGTTGAAATCATGTTTACGTTACATTTTTTTATTATTCAAATTCATGAATTGATTTTATTTGCAATTTGACGTTCACTTTGTTTATATAGGAAGAAGAGAATATAGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCATTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGTAGCTTATGGGTACTATTTTTTTTCCCTTATTTTATTGTTTGCAAGTTAATTGAGTATATGATTTGTAATTTCTTCGTGAAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTCAGGCTCCTAAGAATGTGAGTTGGTTATTCCTTTTTGTTAGTTTATTGTCAAAATTTCTTGCATTTGCCTATATGGAGTTTAAACCTCCTACTTAATGATAATGAGAGTGTAACATCTCACTTAATTGAGTTCTAACGCGACTTAAGATAATAGTTGCATTTCTCACTAATAATTTGTTGGATTTCAGATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTTGAGGGGTGAGTTTTTCTTGATATGAGGTTTGATTAACTCTTTGGCATGTTGTAGAATACTATTATCTAACAAACAAAATTGGCGTTTTAAATTTTTGTTCATTCTATCTACTTCTATCCTTATCTTTCTTCTTGGTTTGAAAATTGGGAGTCTTATGTTTATTGGAATCTTACAGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCTGCTGAAAAAGAGGTATTTTCCTTGATCTATTCCCCTATTGATATAATTTATAGTTTACCGATTTTAAATTCTATTGACTGGTGACTCCATTTTATGTATTGCAACTATCACTGATACAACAGGAACTGAAAAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAACAGATATTTTGGATTGTAAGTGTTATTATTTTGATTTATATGTAATGAATCTCATTTTATTTTTGTTTCTATATATAATGCAACAAAAAGAGACGTTCTAGACTTCTTAATGTTAAAAATGAAAGGAAAATTAGAATGAAGTTTGTTATTGGCAAGTATTAGGAAAAATAAAAGCTCCAACTTTTTTGTTACTAGTTTATAGATTGAAGACAGAAGCTTGATACTTCATCATTACCAAATTATGTTTTATCATAATCTTATTATTTGTGCCCATTGTTTTGTTATATTTAGATTTTAGATTCATTTTTCCATGTAATTTTAGGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAAGCCCTTCTATCTTAAGAAATGTAAGAATGTTTTCCCTCTCTTTTTGCTTAAATTCTATCTCAAGGGCATGCACTTAGGTTATGGCTTTCTGCTTGGAACTTCTACATTAAACTTTGGAGGACATTTGGTGATCATTTTCCAACAGTAGTAGTGCATATGGTGGAACTTTGTACTTTGCACTTGTGTGTTTGTGGTTATCCCATGGTTAGTATTAATACTTCTACATTAGCTAGGATTTAATTTGATAACTCTAACATGGGTGTAGTGCTGGTATCATTTTGCTTCTCTCCTTTGCCCCTGCTAAAAAGAGACAATATAGAGAGAAAAGTAGAAAATAAGAAAAAACTGGACTTCCACATGAAGGCAATGGGCAGTTTGTGCATTTGATTTCTGACATAAACACATTCTGAACATGTATACGTGATGTGAAGTGTTTGTTTTGTTATTTTCTTGAAATCTTTGCTGCATTGGGTTTTTAGGATATGCAAGGTATATGCTTGGGGAGTGAATTATAAGAAATTGAAAGATAGGTTTTCATAAAAGTTCAAATTTATGGAACTAAGATATAAATTAATAAGAGCAAAAAAATCCATAGAAATTAGTATAGAAAAAGGGAAGAGAATTAATAGATTCACTTGATAGAACTTGCTGCAGTGGTGTGACAAGATGTGAAAGTGATAAATAAGATGCAAGTTATTTTTAAGGTGTGATTTTTATCTTGTTGGAAAAGTATTTTCCATGGAGAAATATTTGCTTGAAATTGAACAAATGAGGAAGTAAGTTTGTACCTCCAATTCTTTACCACATAATTCCTCATGTTTTAAAATCATTAATATGTCTAGAGGTATATAAAAATACTTGTATTAAATGTGTCCTTCTGTCAAAGTACTAAAATTTTTAAAATATGGTATGATGTTATGGCTTATGTCCATGTCTTATCCATGACGTCCTGAATCCATGTGCGAGACTTTCAGGTCATTTCATCATAGTTGTGCATCTTGAATCTGTAGTTTGGGTGGCTGTGTAGAAAATTAATAGTTTGGTTGTCCATTATGTATTGATCTTATTTTACCGTATGTATTTTTTTCCTAGGGTATTATTTTGATAGAATTCTTGGCCGTTACGGATCATAACAATTCGTCGAAAACATTTTATTGTGGTTAATGGAAAGAACATAATATTTTTTAAAATTATCATGACTGTTTCCATCTTCAGCATTTTAAGATGCTTCACTTTCTGGTTTTGCCTGGATATGGATGTTTTCTTAAGCCTGTTTTGTCTTTTGCAGCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGGTATGAATCCCCTGTTTTTCATTTCAACATGGTATGTTTAGTGCTACTTATGTTTCTAAATGAGTGATTAACCATTCTGGAATTTGAACAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATACGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGA

mRNA sequence

ATGTACAAAGTACCTACTCCTGCTCGTGGCCCTAGGCGTAGAGGACGACGTCAAGTAGATCAAGATGCTCCAGTAGGACTTGACGATCCCGTACCTGAAGTTATCTATCATAGAGTTGAAGACATTCCACCATTTACACAGACAAAGGATGATGCTGGTCTGTCCACGCCTATGGTCATGATATCGACTCCTGGTTCTAGTCAGTATCACACACCATCTTCGCCGCTGCAGTATGGCTATGGATGGGGCCATGGACGTGGACGTGGAGAGCATGGACAATACTTCAACCCTACGGAAGATCGAGACCGTACAGAGAGTCAAGAGACACCAGCGGCACCACTAGTTCGTCGTCTGCCACATCGGCAAATAAATGGAATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTTGAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGAAGAAGAGAATATAGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCATTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTCAGGCTCCTAAGAATATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTTGAGGGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCTGCTGAAAAAGAGGAACTGAAAAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAACAGATATTTTGGATTGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATACGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGA

Coding sequence (CDS)

ATGTACAAAGTACCTACTCCTGCTCGTGGCCCTAGGCGTAGAGGACGACGTCAAGTAGATCAAGATGCTCCAGTAGGACTTGACGATCCCGTACCTGAAGTTATCTATCATAGAGTTGAAGACATTCCACCATTTACACAGACAAAGGATGATGCTGGTCTGTCCACGCCTATGGTCATGATATCGACTCCTGGTTCTAGTCAGTATCACACACCATCTTCGCCGCTGCAGTATGGCTATGGATGGGGCCATGGACGTGGACGTGGAGAGCATGGACAATACTTCAACCCTACGGAAGATCGAGACCGTACAGAGAGTCAAGAGACACCAGCGGCACCACTAGTTCGTCGTCTGCCACATCGGCAAATAAATGGAATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTTGAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGAAGAAGAGAATATAGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCATTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTCAGGCTCCTAAGAATATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTTGAGGGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCTGCTGAAAAAGAGGAACTGAAAAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAACAGATATTTTGGATTGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATACGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGA

Protein sequence

MYKVPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDIPPFTQTKDDAGLSTPMVMISTPGSSQYHTPSSPLQYGYGWGHGRGRGEHGQYFNPTEDRDRTESQETPAAPLVRRLPHRQINGMKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

Homology

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BLAST of Moc11g29230.1 vs. NCBI nr
Match: XP_022141752.1 (ribosomal RNA processing protein 36 homolog [Momordica charantia])

HSP 1 Score: 461.8 bits (1187), Expect = 5.4e-126
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 126 MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 185
           MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK
Sbjct: 1   MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 60

Query: 186 TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 245
           TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN
Sbjct: 61  TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 120

Query: 246 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 305
           FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK
Sbjct: 121 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 180

Query: 306 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 365
           EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR
Sbjct: 181 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 240

Query: 366 SSKLDEQE 374
           SSKLDEQE
Sbjct: 241 SSKLDEQE 248

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BLAST of Moc11g29230.1 vs. NCBI nr
Match: XP_038889542.1 (ribosomal RNA processing protein 36 homolog [Benincasa hispida] >XP_038889543.1 ribosomal RNA processing protein 36 homolog [Benincasa hispida])

HSP 1 Score: 400.6 bits (1028), Expect = 1.5e-107
Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 126 MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSH 185
           MKK S    SS KQ+M EESED ESSS +D +DSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKHSSSVLSSGKQIMEEESEDFESSSSDDSLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 186 STYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGF 245
           S +QKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPKNMVRDPRFESLSGTLDV+GF
Sbjct: 61  SMFQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDVDGF 120

Query: 246 KKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILA 305
           KKRY+FIYEN LPAEKEELKKQLRKTNDPNVVEELK Q+ WIDKQFKSD+TKRVDAAILA
Sbjct: 121 KKRYSFIYENKLPAEKEELKKQLRKTNDPNVVEELKNQLSWIDKQFKSDSTKRVDAAILA 180

Query: 306 KHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 365
           KHK KEREAAK GKKPFYLKKSEIRKQRLIEKY +LKSTGKLDAY+ERRRRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLIEKYTSLKSTGKLDAYVERRRRKNAAKDRRY 240

Query: 366 VPYGRSSKLDEQE 374
           +P+ RSSKLDEQ+
Sbjct: 241 IPHQRSSKLDEQD 253

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BLAST of Moc11g29230.1 vs. NCBI nr
Match: XP_008456647.1 (PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902001.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902002.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >KAA0031699.1 ribosomal RNA processing protein 36-like protein [Cucumis melo var. makuwa] >TYK04413.1 ribosomal RNA processing protein 36-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 399.8 bits (1026), Expect = 2.5e-107
Identity = 219/253 (86.56%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 126 MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSH 185
           MKK S    SS KQ+M EESEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 186 STYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGF 245
           S YQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK+MVRDPRFESLSGTLDV+GF
Sbjct: 61  SMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGF 120

Query: 246 KKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILA 305
           KKRY+FIYE NLPAEKEELKKQLRKTNDPNV EELKKQ+ WIDKQFKSD+TKRVDAAILA
Sbjct: 121 KKRYSFIYEKNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 306 KHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 365
           KHK KEREAAK GKKPFYLKKSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 366 VPYGRSSKLDEQE 374
           +PY RSSKLDEQ+
Sbjct: 241 IPYQRSSKLDEQD 253

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BLAST of Moc11g29230.1 vs. NCBI nr
Match: XP_023535518.1 (ribosomal RNA processing protein 36 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.4 bits (1017), Expect = 2.8e-106
Identity = 217/244 (88.93%), Postives = 227/244 (93.03%), Query Frame = 0


Query: 131 SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 190
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 191 KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 250
           KKG RANKNRPMEVSSKKPV RFREVIQAPK+MVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKSMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 251 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 310
           NNLPAEKEELKKQLRKTND NVVEELKKQ+ WIDKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 311 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 370
           AK GKKPFYLKKSEIRKQRL EKYNTLKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNTLKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

Query: 371 DEQE 374
           DEQE
Sbjct: 250 DEQE 253

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BLAST of Moc11g29230.1 vs. NCBI nr
Match: XP_022973531.1 (ribosomal RNA processing protein 36 homolog [Cucurbita maxima])

HSP 1 Score: 396.4 bits (1017), Expect = 2.8e-106
Identity = 217/244 (88.93%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 131 SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 190
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 191 KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 250
           KKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 251 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 310
           NNLPAEKEELKKQLRKTND NVVEELKKQ+ WIDKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 311 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 370
           AK GKKPFYLKKSEIRKQRL EKYN LKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNALKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

Query: 371 DEQE 374
           DEQE
Sbjct: 250 DEQE 253

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BLAST of Moc11g29230.1 vs. ExPASy Swiss-Prot
Match: A7SL20 (Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis OX=45351 GN=v1g245966 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.9e-25
Identity = 87/240 (36.25%), Postives = 137/240 (57.08%), Query Frame = 0


Query: 137 MEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKT----NQEKKG 196
           + +S D ES + +   + E E+++ EL+ + F ELQ  +       Y        +E+  
Sbjct: 5   LSDSSDDESPTDDCSDEGEVEHLKDELSQIPFCELQDLKDKIGSKKYNLAIHGIMEERTQ 64

Query: 197 G------RANKNR-PMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 256
           G      +  KN+ P E+SSK+ V + R+V+Q  K M RDPRF+ LSG  + + F+K Y+
Sbjct: 65  GIPDLETKKKKNKGPQELSSKQRVPKLRKVVQVKKKMGRDPRFDDLSGKFNEDLFRKSYS 124

Query: 257 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 316
           F+ +  +  EK+ ++K+L+KT +    + L   +  +++Q +S  +         K K  
Sbjct: 125 FVNDIRV-EEKKSVEKELKKTKNAEKRKNLNDLLKVMNQQERSRKSAEAKRESKKKIKET 184

Query: 317 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 366
           ERE  + GKKPFYL+KSE++K  L EKY  LKS GKL  Y+ +RR+K A+KDRR+VP  R
Sbjct: 185 ERELVQKGKKPFYLRKSELKKLELAEKYKELKSKGKLQKYLTKRRKKTASKDRRHVPERR 243

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BLAST of Moc11g29230.1 vs. ExPASy Swiss-Prot
Match: B6K8A0 (rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=rrp36 PE=3 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 2.1e-24
Identity = 81/269 (30.11%), Postives = 143/269 (53.16%), Query Frame = 0


Query: 123 INGMKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHST 182
           +N   +     + VM E E  + ++ E    ++ E+ +R+L  + F EL  A+       
Sbjct: 21  LNDTSEEDYEVEDVMSEVESTDEANDESEEKTDLESTQRQLKSIPFSELLEAQRALKSEK 80

Query: 183 YQKTNQEKKGGRANKNR-----------------------PMEVSSKKPVSRFREVIQAP 242
            + T  +K G + +KNR                       P+E+SSK+ V RFREV+  P
Sbjct: 81  VKFT--QKNGAKLSKNRRRHESPSDSEDDDDDRNDRSKHAPVEMSSKRAVPRFREVVHVP 140

Query: 243 KNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQI 302
           K + RDPRF++LSG L+V+  K  Y F+ E  L +E ++L+++L+   +    E +K+ +
Sbjct: 141 KPLRRDPRFDTLSGNLNVDKVKNNYGFVMEYRL-SEIKQLEQELKSCREQERRERIKEAL 200

Query: 303 FWIDKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKST 362
             +  + +        A +L +H+  E+E  + GKKPFYLKKSE +K   ++KY +++ T
Sbjct: 201 KSLRSKLERRKEDERTARVLKEHRQSEKEKIRQGKKPFYLKKSEQKKLLQLDKYKSMEGT 260

Query: 363 GKLDAYMERRRRKNAAKDRRYVPYGRSSK 369
             LD YME+++++ A K+++ +P  R  +
Sbjct: 261 KALDRYMEKKQKRRAQKEKKRLPRARPDR 286

[Close]

BLAST of Moc11g29230.1 vs. ExPASy Swiss-Prot
Match: A7E4K0 (rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=rrp36 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.8e-24
Identity = 91/280 (32.50%), Postives = 150/280 (53.57%), Query Frame = 0


Query: 116 RRLPHRQINGMKKRSSSSKQVMEESEDLESSS-------PEDFVDSEEENIERELADVTF 175
           RR    +I      S+ S+   +++E+ ESSS        E+  +SEEE      A ++F
Sbjct: 20  RRESSEEIEESSSDSAPSEIGRDDNEEEESSSDETEDEVEEEASESEEETSNDAAASISF 79

Query: 176 EELQRARSDGSHSTYQKTNQEKKGG-----------------------RANKNRPMEVSS 235
             L +A++  S  + + + + KK                         R++KN P E+SS
Sbjct: 80  GALAKAQATMSKPSKRDSKKSKKSNADGWEDNEATERKAGKKDQRDFTRSSKNAPTEISS 139

Query: 236 KKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEELKKQLRK 295
           KK VSR REV+   K  +RDPRF+   G +D+   +K Y+F+ +     E ++L+K ++K
Sbjct: 140 KKAVSRRREVVPVKKREIRDPRFDPTHGPVDMGKIEKVYDFLVDYR-EDEIKKLRKTIKK 199

Query: 296 TNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIR 355
           T D +  E+LK+ +  ++ + K+D  KR    IL KH+ +E+E  K GK P+YLKK+E +
Sbjct: 200 TKDEDEKEKLKRDLLSMESRKKTDAKKRKAREILDKHRKEEKELVKEGKTPYYLKKAEQK 259

Query: 356 KQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 366
           K+ L++ Y  LK   +LD  +ERRR+K   K+++ +P  R
Sbjct: 260 KRVLLDTYGELKGR-QLDRVIERRRKKVEGKEKKNMPRAR 297

[Close]

BLAST of Moc11g29230.1 vs. ExPASy Swiss-Prot
Match: A6RKG5 (rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=rrp36 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 8.1e-24
Identity = 94/279 (33.69%), Postives = 150/279 (53.76%), Query Frame = 0


Query: 116 RRLPHRQINGMKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERE------LADVTFE 175
           RR    +I      S+ S+    ++E   SS  E   D +EE  E E       A ++F 
Sbjct: 20  RREASEEIEESSSDSAPSETGKNDAEGGSSSDEEVDDDDDEELSESEEEASNGAASISFG 79

Query: 176 ELQRAR------SDGSHSTYQKTN---------QEKKGG--------RANKNRPMEVSSK 235
            L +A+      S       +K+N          E+K G        R++KN P EVSSK
Sbjct: 80  ALAKAQATMSKPSKRDSKNLKKSNGDGWEDNEATERKAGKKDQRDFTRSSKNAPTEVSSK 139

Query: 236 KPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEELKKQLRKT 295
           K VSR REV+   K  +RDPRFE  +G +D++  +K Y+F+ +     E ++LK+ +RKT
Sbjct: 140 KAVSRRREVVPVKKREIRDPRFEPTNGPVDMQKIEKNYDFLVDYR-EDEMKKLKETIRKT 199

Query: 296 NDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRK 355
            D +  E+LK+++  ++ + K+D  KR    +L KH+ +E+E  K GK P+YLKK+E +K
Sbjct: 200 KDEDEKEKLKRELLRMESRKKTDARKRKAREVLDKHRKEEKELVKEGKTPYYLKKAEQKK 259

Query: 356 QRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 366
           + L++ +  LK   +LD  +ERRR+K   K+++ +P  R
Sbjct: 260 RVLLDTFGELKGR-QLDRVIERRRKKVEGKEKKNMPRAR 296

[Close]

BLAST of Moc11g29230.1 vs. ExPASy Swiss-Prot
Match: Q96EU6 (Ribosomal RNA processing protein 36 homolog OS=Homo sapiens OX=9606 GN=RRP36 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.9e-21
Identity = 75/218 (34.40%), Postives = 127/218 (58.26%), Query Frame = 0


Query: 161 RELADVTFEELQRARSDGSHSTYQK----TNQEKKGGR--------ANKNRPMEVSSKKP 220
           R  ++++FEEL   +S     TY++     + +K+  R        A+K+RP+E+S+K  
Sbjct: 43  RGTSNMSFEELLELQSQVGTKTYKQLVAGNSPKKQASRPPIQNACVADKHRPLEMSAKIR 102

Query: 221 VSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPA-EKEELKKQLRKTN 280
           V   R+V+   K + RDPRF+ LSG  + E F K Y F+  N++ A EKE +KKQL+K  
Sbjct: 103 VPFLRQVVPISKKVARDPRFDDLSGEYNPEVFDKTYQFL--NDIRAKEKELVKKQLKKHL 162

Query: 281 DPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQ 340
                E+L++ +  +++Q  +   ++    +    K + R  A+ G +P++LKKSE R+ 
Sbjct: 163 SGEEHEKLQQLLQRMEQQEMAQQERKQQQELHLALKQERRAQAQQGHRPYFLKKSEQRQL 222

Query: 341 RLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 366
            L EK+  LK + KL+ ++ R+RR+NA KDRR++P  +
Sbjct: 223 ALAEKFKELKRSKKLENFLSRKRRRNAGKDRRHLPLSK 258

[Close]

BLAST of Moc11g29230.1 vs. ExPASy TrEMBL
Match: A0A6J1CKR1 (ribosomal RNA processing protein 36 homolog OS=Momordica charantia OX=3673 GN=LOC111012036 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.6e-126
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 126 MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 185
           MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK
Sbjct: 1   MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 60

Query: 186 TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 245
           TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN
Sbjct: 61  TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 120

Query: 246 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 305
           FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK
Sbjct: 121 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 180

Query: 306 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 365
           EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR
Sbjct: 181 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 240

Query: 366 SSKLDEQE 374
           SSKLDEQE
Sbjct: 241 SSKLDEQE 248

[Close]

BLAST of Moc11g29230.1 vs. ExPASy TrEMBL
Match: A0A1S3C3C0 (ribosomal RNA processing protein 36 homolog OS=Cucumis melo OX=3656 GN=LOC103496541 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.2e-107
Identity = 219/253 (86.56%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 126 MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSH 185
           MKK S    SS KQ+M EESEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 186 STYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGF 245
           S YQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK+MVRDPRFESLSGTLDV+GF
Sbjct: 61  SMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGF 120

Query: 246 KKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILA 305
           KKRY+FIYE NLPAEKEELKKQLRKTNDPNV EELKKQ+ WIDKQFKSD+TKRVDAAILA
Sbjct: 121 KKRYSFIYEKNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 306 KHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 365
           KHK KEREAAK GKKPFYLKKSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 366 VPYGRSSKLDEQE 374
           +PY RSSKLDEQ+
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]

BLAST of Moc11g29230.1 vs. ExPASy TrEMBL
Match: A0A5A7SR00 (Ribosomal RNA processing protein 36-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00090 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.2e-107
Identity = 219/253 (86.56%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 126 MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSH 185
           MKK S    SS KQ+M EESEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 186 STYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGF 245
           S YQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK+MVRDPRFESLSGTLDV+GF
Sbjct: 61  SMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGF 120

Query: 246 KKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILA 305
           KKRY+FIYE NLPAEKEELKKQLRKTNDPNV EELKKQ+ WIDKQFKSD+TKRVDAAILA
Sbjct: 121 KKRYSFIYEKNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 306 KHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 365
           KHK KEREAAK GKKPFYLKKSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 366 VPYGRSSKLDEQE 374
           +PY RSSKLDEQ+
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]

BLAST of Moc11g29230.1 vs. ExPASy TrEMBL
Match: A0A6J1I8W9 (ribosomal RNA processing protein 36 homolog OS=Cucurbita maxima OX=3661 GN=LOC111472062 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.4e-106
Identity = 217/244 (88.93%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 131 SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 190
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 191 KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 250
           KKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 251 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 310
           NNLPAEKEELKKQLRKTND NVVEELKKQ+ WIDKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 311 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 370
           AK GKKPFYLKKSEIRKQRL EKYN LKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNALKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

Query: 371 DEQE 374
           DEQE
Sbjct: 250 DEQE 253

[Close]

BLAST of Moc11g29230.1 vs. ExPASy TrEMBL
Match: A0A6J1EBL5 (ribosomal RNA processing protein 36 homolog OS=Cucurbita moschata OX=3662 GN=LOC111432703 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 5.2e-106
Identity = 216/244 (88.52%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 131 SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 190
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 191 KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 250
           KKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 251 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 310
           NNLPAEKEELKKQLRK +D NVVEELKKQ+ WIDKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKASDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 311 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 370
           AK GKKPFYLKKSEIRKQRL EKYNTLKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNTLKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

Query: 371 DEQE 374
           DEQE
Sbjct: 250 DEQE 253

[Close]

BLAST of Moc11g29230.1 vs. TAIR 10
Match: AT1G12650.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-65
Identity = 144/246 (58.54%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 127 KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 186
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 187 TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 246
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 247 YNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSD-TTKRVDAAILAKH 306
           YNF +E+ LP E+EELKK+L+KT +P  ++ELK Q+ +++K  K + +T+   AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 307 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 366
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

Query: 367 YGRSSK 369
           Y R+ +
Sbjct: 246 YRRAEE 248

[Close]

BLAST of Moc11g29230.1 vs. TAIR 10
Match: AT1G12650.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-65
Identity = 144/246 (58.54%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 127 KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 186
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 187 TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 246
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 247 YNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSD-TTKRVDAAILAKH 306
           YNF +E+ LP E+EELKK+L+KT +P  ++ELK Q+ +++K  K + +T+   AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 307 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 366
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

Query: 367 YGRSSK 369
           Y R+ +
Sbjct: 246 YRRAEE 248

[Close]

BLAST of Moc11g29230.1 vs. TAIR 10
Match: AT1G12650.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-65
Identity = 144/246 (58.54%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 127 KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 186
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 187 TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 246
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 247 YNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSD-TTKRVDAAILAKH 306
           YNF +E+ LP E+EELKK+L+KT +P  ++ELK Q+ +++K  K + +T+   AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 307 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 366
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

Query: 367 YGRSSK 369
           Y R+ +
Sbjct: 246 YRRAEE 248

[Close]

BLAST of Moc11g29230.1 vs. TAIR 10
Match: AT1G12650.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-65
Identity = 144/246 (58.54%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 127 KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 186
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 187 TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 246
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 247 YNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSD-TTKRVDAAILAKH 306
           YNF +E+ LP E+EELKK+L+KT +P  ++ELK Q+ +++K  K + +T+   AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 307 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 366
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

Query: 367 YGRSSK 369
           Y R+ +
Sbjct: 246 YRRAEE 248

The following BLAST results are available for this feature:

BLAST of Moc11g29230.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141752.1	5.4e-126	100.00	ribosomal RNA processing protein 36 homolog [Momordica charantia]	[more]
XP_038889542.1	1.5e-107	86.96	ribosomal RNA processing protein 36 homolog [Benincasa hispida] >XP_038889543.1 ...	[more]
XP_008456647.1	2.5e-107	86.56	PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902...	[more]
XP_023535518.1	2.8e-106	88.93	ribosomal RNA processing protein 36 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022973531.1	2.8e-106	88.93	ribosomal RNA processing protein 36 homolog [Cucurbita maxima]	[more]

BLAST of Moc11g29230.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7SL20	1.9e-25	36.25	Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis OX=45351 G...	[more]
B6K8A0	2.1e-24	30.11	rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / ...	[more]
A7E4K0	4.8e-24	32.50	rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1...	[more]
A6RKG5	8.1e-24	33.69	rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) OX=33264...	[more]
Q96EU6	4.9e-21	34.40	Ribosomal RNA processing protein 36 homolog OS=Homo sapiens OX=9606 GN=RRP36 PE=...	[more]

BLAST of Moc11g29230.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKR1	2.6e-126	100.00	ribosomal RNA processing protein 36 homolog OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3C3C0	1.2e-107	86.56	ribosomal RNA processing protein 36 homolog OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A5A7SR00	1.2e-107	86.56	Ribosomal RNA processing protein 36-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1I8W9	1.4e-106	88.93	ribosomal RNA processing protein 36 homolog OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EBL5	5.2e-106	88.52	ribosomal RNA processing protein 36 homolog OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Moc11g29230.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12650.1	1.5e-65	58.54	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 ...	[more]
AT1G12650.2	1.5e-65	58.54	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 ...	[more]
AT1G12650.3	1.5e-65	58.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G12650.4	1.5e-65	58.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 319..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..373
IPR009292	rRNA biogenesis protein RRP36	PFAM	PF06102	RRP36	coord: 194..359 e-value: 1.3E-47 score: 161.8
IPR009292	rRNA biogenesis protein RRP36	PANTHER	PTHR21738	UNCHARACTERIZED	coord: 139..366

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc11g29230	Moc11g29230	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc11g29230.1.exon1	Moc11g29230.1.exon1	exon
Moc11g29230.1.exon2	Moc11g29230.1.exon2	exon
Moc11g29230.1.exon3	Moc11g29230.1.exon3	exon
Moc11g29230.1.exon4	Moc11g29230.1.exon4	exon
Moc11g29230.1.exon5	Moc11g29230.1.exon5	exon
Moc11g29230.1.exon6	Moc11g29230.1.exon6	exon
Moc11g29230.1.exon7	Moc11g29230.1.exon7	exon
Moc11g29230.1.exon8	Moc11g29230.1.exon8	exon
Moc11g29230.1.exon9	Moc11g29230.1.exon9	exon
Moc11g29230.1.exon10	Moc11g29230.1.exon10	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc11g29230.1	cds.Moc11g29230.1	CDS
cds.Moc11g29230.1	cds.Moc11g29230.1_2	CDS
cds.Moc11g29230.1	cds.Moc11g29230.1_3	CDS
cds.Moc11g29230.1	cds.Moc11g29230.1_4	CDS
cds.Moc11g29230.1	cds.Moc11g29230.1_5	CDS
cds.Moc11g29230.1	cds.Moc11g29230.1_6	CDS
cds.Moc11g29230.1	cds.Moc11g29230.1_7	CDS
cds.Moc11g29230.1	cds.Moc11g29230.1_8	CDS
cds.Moc11g29230.1	cds.Moc11g29230.1_9	CDS
cds.Moc11g29230.1	cds.Moc11g29230.1_10	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc11g29230.1	Moc11g29230.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0030686	90S preribosome
cellular_component	GO:0005730	nucleolus