Moc09g34540.1 (mRNA) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGGCATGAACGTCTGGCTATTTGTCCACTCCGAGGAGATTCCGGCCGCCATCAAGCCCTACAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGCGCGGTTTTCGAGGGGAAGTATTACGGGCCGGATGATTTCAAGGCACTGGAGACAATGCCGTCCAGGGCGGAGGTGTATGCCAAAATGTTGGGCCTGTTGAACGGTCCGGCGTCGAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAGGCTTACGTGCAGAAATTGGAGGAGCAGGGCGGCGGCGGCGGGCAGTAA ATGAAGGGCATGAACGTCTGGCTATTTGTCCACTCCGAGGAGATTCCGGCCGCCATCAAGCCCTACAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGCGCGGTTTTCGAGGGGAAGTATTACGGGCCGGATGATTTCAAGGCACTGGAGACAATGCCGTCCAGGGCGGAGGTGTATGCCAAAATGTTGGGCCTGTTGAACGGTCCGGCGTCGAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAGGCTTACGTGCAGAAATTGGAGGAGCAGGGCGGCGGCGGCGGGCAGTAA ATGAAGGGCATGAACGTCTGGCTATTTGTCCACTCCGAGGAGATTCCGGCCGCCATCAAGCCCTACAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGCGCGGTTTTCGAGGGGAAGTATTACGGGCCGGATGATTTCAAGGCACTGGAGACAATGCCGTCCAGGGCGGAGGTGTATGCCAAAATGTTGGGCCTGTTGAACGGTCCGGCGTCGAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAGGCTTACGTGCAGAAATTGGAGGAGCAGGGCGGCGGCGGCGGGCAGTAA MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ Homology
BLAST of Moc09g34540.1 vs. NCBI nr
Match: XP_022138927.1 (50S ribosomal protein L10, chloroplastic [Momordica charantia]) HSP 1 Score: 223.8 bits (569), Expect = 7.3e-55 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Moc09g34540.1 vs. NCBI nr
Match: XP_022990377.1 (50S ribosomal protein L10, chloroplastic [Cucurbita maxima]) HSP 1 Score: 218.4 bits (555), Expect = 3.1e-53 Identity = 105/109 (96.33%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Moc09g34540.1 vs. NCBI nr
Match: XP_004143603.1 (50S ribosomal protein L10, chloroplastic [Cucumis sativus] >KGN50478.1 hypothetical protein Csa_000689 [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 5.2e-53 Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Moc09g34540.1 vs. NCBI nr
Match: XP_023523503.1 (50S ribosomal protein L10, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216.9 bits (551), Expect = 8.9e-53 Identity = 104/109 (95.41%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Moc09g34540.1 vs. NCBI nr
Match: XP_008445837.1 (PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis melo] >KAA0034043.1 50S ribosomal protein L10 [Cucumis melo var. makuwa]) HSP 1 Score: 216.1 bits (549), Expect = 1.5e-52 Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Moc09g34540.1 vs. ExPASy Swiss-Prot
Match: O80362 (50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL10 PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 1.7e-46 Identity = 85/105 (80.95%), Postives = 100/105 (95.24%), Query Frame = 0
BLAST of Moc09g34540.1 vs. ExPASy Swiss-Prot
Match: P82139 (50S ribosomal protein L10, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL10 PE=1 SV=2) HSP 1 Score: 167.5 bits (423), Expect = 8.1e-41 Identity = 75/103 (72.82%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of Moc09g34540.1 vs. ExPASy Swiss-Prot
Match: Q9FY50 (50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL10 PE=2 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 4.0e-40 Identity = 75/103 (72.82%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of Moc09g34540.1 vs. ExPASy Swiss-Prot
Match: B9KBJ7 (50S ribosomal protein L10 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NBRC 107923 / NS-E) OX=309803 GN=rplJ PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08 Identity = 30/102 (29.41%), Postives = 53/102 (51.96%), Query Frame = 0
BLAST of Moc09g34540.1 vs. ExPASy Swiss-Prot
Match: Q119S8 (50S ribosomal protein L10 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=rplJ PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.3e-08 Identity = 32/89 (35.96%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of Moc09g34540.1 vs. ExPASy TrEMBL
Match: A0A6J1CCK7 (50S ribosomal protein L10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009986 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.5e-55 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Moc09g34540.1 vs. ExPASy TrEMBL
Match: A0A6J1JII9 (50S ribosomal protein L10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487249 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53 Identity = 105/109 (96.33%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Moc09g34540.1 vs. ExPASy TrEMBL
Match: A0A0A0KLL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176000 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.5e-53 Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Moc09g34540.1 vs. ExPASy TrEMBL
Match: A0A5A7SUB8 (50S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00270 PE=3 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 7.4e-53 Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Moc09g34540.1 vs. ExPASy TrEMBL
Match: A0A1S3BDM0 (50S ribosomal protein L10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488738 PE=3 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 7.4e-53 Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Moc09g34540.1 vs. TAIR 10
Match: AT5G13510.1 (Ribosomal protein L10 family protein ) HSP 1 Score: 165.2 bits (417), Expect = 2.9e-41 Identity = 75/103 (72.82%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of Moc09g34540.1 vs. TAIR 10
Match: AT3G12370.1 (Ribosomal protein L10 family protein ) HSP 1 Score: 117.5 bits (293), Expect = 6.9e-27 Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|