Moc09g34540 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g34540
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	50S ribosomal protein L10
Location	chr9: 26410121 .. 26410450 (-)
RNA-Seq Expression	Moc09g34540
Synteny	Moc09g34540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGCATGAACGTCTGGCTATTTGTCCACTCCGAGGAGATTCCGGCCGCCATCAAGCCCTACAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGCGCGGTTTTCGAGGGGAAGTATTACGGGCCGGATGATTTCAAGGCACTGGAGACAATGCCGTCCAGGGCGGAGGTGTATGCCAAAATGTTGGGCCTGTTGAACGGTCCGGCGTCGAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAGGCTTACGTGCAGAAATTGGAGGAGCAGGGCGGCGGCGGCGGGCAGTAA

mRNA sequence

ATGAAGGGCATGAACGTCTGGCTATTTGTCCACTCCGAGGAGATTCCGGCCGCCATCAAGCCCTACAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGCGCGGTTTTCGAGGGGAAGTATTACGGGCCGGATGATTTCAAGGCACTGGAGACAATGCCGTCCAGGGCGGAGGTGTATGCCAAAATGTTGGGCCTGTTGAACGGTCCGGCGTCGAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAGGCTTACGTGCAGAAATTGGAGGAGCAGGGCGGCGGCGGCGGGCAGTAA

Coding sequence (CDS)

ATGAAGGGCATGAACGTCTGGCTATTTGTCCACTCCGAGGAGATTCCGGCCGCCATCAAGCCCTACAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGCGCGGTTTTCGAGGGGAAGTATTACGGGCCGGATGATTTCAAGGCACTGGAGACAATGCCGTCCAGGGCGGAGGTGTATGCCAAAATGTTGGGCCTGTTGAACGGTCCGGCGTCGAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAGGCTTACGTGCAGAAATTGGAGGAGCAGGGCGGCGGCGGCGGGCAGTAA

Protein sequence

MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ

Homology

[Close]

BLAST of Moc09g34540 vs. NCBI nr
Match: XP_022138927.1 (50S ribosomal protein L10, chloroplastic [Momordica charantia])

HSP 1 Score: 223.8 bits (569), Expect = 7.3e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR
Sbjct: 125 MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 184

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 110
           AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 185 AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 233

[Close]

BLAST of Moc09g34540 vs. NCBI nr
Match: XP_022990377.1 (50S ribosomal protein L10, chloroplastic [Cucurbita maxima])

HSP 1 Score: 218.4 bits (555), Expect = 3.1e-53
Identity = 105/109 (96.33%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR
Sbjct: 125 MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 184

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 110
           AEVYAKMLGLL GPASSLVGT+QAPAR++LMVLKAYVQKLEEQGGGGGQ
Sbjct: 185 AEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGGQ 233

[Close]

BLAST of Moc09g34540 vs. NCBI nr
Match: XP_004143603.1 (50S ribosomal protein L10, chloroplastic [Cucumis sativus] >KGN50478.1 hypothetical protein Csa_000689 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 5.2e-53
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FKALETMPSR
Sbjct: 127 MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALETMPSR 186

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 110
           AEVYAKMLGLL  PASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 187 AEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 235

[Close]

BLAST of Moc09g34540 vs. NCBI nr
Match: XP_023523503.1 (50S ribosomal protein L10, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.9 bits (551), Expect = 8.9e-53
Identity = 104/109 (95.41%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFK LETMPSR
Sbjct: 125 MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKTLETMPSR 184

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 110
           AEVYAKMLGLL GPASSLVGT+QAPAR++LMVLKAYVQKLEEQGGGGGQ
Sbjct: 185 AEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGGQ 233

[Close]

BLAST of Moc09g34540 vs. NCBI nr
Match: XP_008445837.1 (PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis melo] >KAA0034043.1 50S ribosomal protein L10 [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.5e-52
Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALETMPSR
Sbjct: 125 MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALETMPSR 184

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 110
           AEVYAKMLGLL  PASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 185 AEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 233

[Close]

BLAST of Moc09g34540 vs. ExPASy Swiss-Prot
Match: O80362 (50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-46
Identity = 85/105 (80.95%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMN WLFVHSEEIPAA+KPYR FQKEKKLE+NDFTGAVFEGK+YGP++FKALET+P+R
Sbjct: 121 MKGMNAWLFVHSEEIPAALKPYRTFQKEKKLEENDFTGAVFEGKFYGPEEFKALETLPTR 180

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGG 106
           AE+YA++LG L GPAS++VGTIQAPAR L+MVLKAYV+KLEE+GG
Sbjct: 181 AEIYAQLLGSLKGPASAVVGTIQAPARNLVMVLKAYVKKLEEEGG 225

[Close]

BLAST of Moc09g34540 vs. ExPASy Swiss-Prot
Match: P82139 (50S ribosomal protein L10, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL10 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 8.1e-41
Identity = 75/103 (72.82%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMN WLFVHSEEIP AIKPYR FQKE+KLEDNDFTGA FEGK+YGP + K LETMPS+
Sbjct: 126 MKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLETMPSK 185

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQ 104
           AE++AK+LG L  P S+LVGT+QAPAR+L+ +LKAY++KLE++
Sbjct: 186 AEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDE 228

[Close]

BLAST of Moc09g34540 vs. ExPASy Swiss-Prot
Match: Q9FY50 (50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.0e-40
Identity = 75/103 (72.82%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMN WLFV ++EIP+AIKPYR FQKE+KLE+NDF GAVFEGK+Y PD+FK LETMP+R
Sbjct: 115 MKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGKFYAPDNFKVLETMPTR 174

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQ 104
           AEVYAKMLG L  PA +LV T+QAPARE++MVL AY++KLE++
Sbjct: 175 AEVYAKMLGALQSPAINLVTTLQAPAREVIMVLMAYIKKLEDE 217

[Close]

BLAST of Moc09g34540 vs. ExPASy Swiss-Prot
Match: B9KBJ7 (50S ribosomal protein L10 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NBRC 107923 / NS-E) OX=309803 GN=rplJ PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08
Identity = 30/102 (29.41%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           +KG    L+V   +   A+K   +F KEK  + +   G   EG+ +  ++ + +  +PS+
Sbjct: 78  LKGPTAVLYVTDGDPVEAVKIIYNFYKEKNADLSKLKGGFLEGRKFSSEEVEKIAKLPSK 137

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEE 103
            E+YA ++G +  P S LV  +    R L++VL A  +K  E
Sbjct: 138 EELYAMLVGRVKAPISGLVFVLSGILRNLVLVLNAVKEKKSE 179

[Close]

BLAST of Moc09g34540 vs. ExPASy Swiss-Prot
Match: Q119S8 (50S ribosomal protein L10 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=rplJ PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.3e-08
Identity = 32/89 (35.96%), Postives = 50/89 (56.18%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           + G N +LF+   +I  AIK Y+DFQK  K    +F G V EG+    D  KA+  +PS+
Sbjct: 77  LAGSNAFLFL-KNDIGGAIKAYQDFQKATK--KTEFKGGVMEGRLLDKDQVKAIADLPSK 136

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPAREL 90
            E+ A++ G +N  A+ L  ++ A   +L
Sbjct: 137 EELLAQVAGAINNIATKLAISLDAVPTQL 162

[Close]

BLAST of Moc09g34540 vs. ExPASy TrEMBL
Match: A0A6J1CCK7 (50S ribosomal protein L10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009986 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.5e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR
Sbjct: 125 MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 184

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 110
           AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 185 AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 233

[Close]

BLAST of Moc09g34540 vs. ExPASy TrEMBL
Match: A0A6J1JII9 (50S ribosomal protein L10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487249 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53
Identity = 105/109 (96.33%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR
Sbjct: 125 MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 184

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 110
           AEVYAKMLGLL GPASSLVGT+QAPAR++LMVLKAYVQKLEEQGGGGGQ
Sbjct: 185 AEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGGQ 233

[Close]

BLAST of Moc09g34540 vs. ExPASy TrEMBL
Match: A0A0A0KLL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176000 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.5e-53
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FKALETMPSR
Sbjct: 127 MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALETMPSR 186

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 110
           AEVYAKMLGLL  PASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 187 AEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 235

[Close]

BLAST of Moc09g34540 vs. ExPASy TrEMBL
Match: A0A5A7SUB8 (50S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00270 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.4e-53
Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALETMPSR
Sbjct: 125 MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALETMPSR 184

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 110
           AEVYAKMLGLL  PASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 185 AEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 233

[Close]

BLAST of Moc09g34540 vs. ExPASy TrEMBL
Match: A0A1S3BDM0 (50S ribosomal protein L10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488738 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.4e-53
Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALETMPSR
Sbjct: 125 MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALETMPSR 184

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 110
           AEVYAKMLGLL  PASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 185 AEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 233

[Close]

BLAST of Moc09g34540 vs. TAIR 10
Match: AT5G13510.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 165.2 bits (417), Expect = 2.9e-41
Identity = 75/103 (72.82%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMN WLFV ++EIP+AIKPYR FQKE+KLE+NDF GAVFEGK+Y PD+FK LETMP+R
Sbjct: 115 MKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGKFYAPDNFKVLETMPTR 174

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQ 104
           AEVYAKMLG L  PA +LV T+QAPARE++MVL AY++KLE++
Sbjct: 175 AEVYAKMLGALQSPAINLVTTLQAPAREVIMVLMAYIKKLEDE 217

[Close]

BLAST of Moc09g34540 vs. TAIR 10
Match: AT3G12370.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 117.5 bits (293), Expect = 6.9e-27
Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 1   MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSR 60
           MKGMN WLFV SE+IPAA+K + +FQKEKKL DN+  GAVFE K Y P D+K +ETMPSR
Sbjct: 76  MKGMNAWLFVQSEDIPAALKTFINFQKEKKLYDNNLGGAVFEEKLYAPQDYKVIETMPSR 135

Query: 61  AEVYAKMLGLLNGPASSLVGTIQAP 86
           A+VY  MLG L+ PA  LV  +QAP
Sbjct: 136 ADVYGMMLGSLHWPALDLVNALQAP 160

The following BLAST results are available for this feature:

BLAST of Moc09g34540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138927.1	7.3e-55	100.00	50S ribosomal protein L10, chloroplastic [Momordica charantia]	[more]
XP_022990377.1	3.1e-53	96.33	50S ribosomal protein L10, chloroplastic [Cucurbita maxima]	[more]
XP_004143603.1	5.2e-53	97.25	50S ribosomal protein L10, chloroplastic [Cucumis sativus] >KGN50478.1 hypotheti...	[more]
XP_023523503.1	8.9e-53	95.41	50S ribosomal protein L10, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_008445837.1	1.5e-52	96.33	PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis melo] >KAA0034043.1...	[more]

BLAST of Moc09g34540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80362	1.7e-46	80.95	50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL10 P...	[more]
P82139	8.1e-41	72.82	50S ribosomal protein L10, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL10 P...	[more]
Q9FY50	4.0e-40	72.82	50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
B9KBJ7	2.4e-08	29.41	50S ribosomal protein L10 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 435...	[more]
Q119S8	5.3e-08	35.96	50S ribosomal protein L10 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 ...	[more]

BLAST of Moc09g34540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCK7	3.5e-55	100.00	50S ribosomal protein L10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1JII9	1.5e-53	96.33	50S ribosomal protein L10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A0A0KLL5	2.5e-53	97.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176000 PE=3 SV=1	[more]
A0A5A7SUB8	7.4e-53	96.33	50S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BDM0	7.4e-53	96.33	50S ribosomal protein L10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488738...	[more]

BLAST of Moc09g34540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13510.1	2.9e-41	72.82	Ribosomal protein L10 family protein	[more]
AT3G12370.1	6.9e-27	64.71	Ribosomal protein L10 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 1..60 e-value: 3.0E-9 score: 39.2
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 1..99
None	No IPR available	GENE3D	6.10.250.290		coord: 61..101 e-value: 1.2E-12 score: 49.4
IPR001790	Ribosomal protein L10P	PANTHER	PTHR11560	39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL	coord: 1..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g34540.1	Moc09g34540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome