Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTTTCTTCAAGTGTACTATTTATTCTTGACAATAACCTAATCAGATCACATCTCTTGAGCCTCGATTGGTGTGACTGCACTTACCCTAAAATTGTTTCTTGTCAGGTCTGAGCCAGTTGTGCAGGCGAGTGTTGAGGCTTCTGATAAGTCTAGGGATTTGAATTACATAATCGAGGAAGGGATATCAAAGGTTAGTTTGGTTACTGGAAGTGGAAGCACCGGGAACATTGATTTAGAGTGTCAAAAGGATGACATTGAAAGTGATGTTGAGTCTGAGGGCACAAGTTCAGCTACAACATCCAGTAGCAGTAGCCATGGCAGAGACAGCAATGATGAAAAAGATGACGAGGAAGAAAATGCATCATCTTCTAGTAGTGGCAACAGTAGTTGCGATGAAGAAGAAGAGGAGAATGAGTTCACTGTGAAAGCAGAGGGACGTGGAGAAATCGGTGAACTCGAAGAAGGTGAGATAAGGGACATTGACATTGAAGACGAAGAGGCTTCTGCAGATCAAATGGTTGCGTGGGATGGTGGTGATGGTGAGGACCTGGACATTGATGATGATGAAGAGGCTGGTGCTGTAGGAGGGCCAATTAGTTCTAAAAATGAGCTTAAGGTCCGTTTTTTTGTTTTCATCCTTGATGCTTGCTGGTAGTCTTTTGCACTTTGAGTAAACGGATGGAGGCTGGATTGGATGGTTGATTAGTAATCAGTATTATTGTATTGCTTCATTTTTGGCTTGTTTGCAGGTTCTTCCTCCAGTTCCTCAGGTGTATGCCACACTACAGCCACACCACCAGATTCTTCCTGTTGGAGTTGTTTTGTCAGTAAGCTCCTTCATTTTATTAGAATCATACGACAAATAATGCTCCAATTCTTCTATGTCTGCCCATTACATGGTTTTCCTTGCTCTTAATGAAGCTAAATAATCTATAAGAAGCGGGTTTTTTTAGATAAATATTAAATTCTATGTTCTGTTTCTACTTGTCAGATAATTGGCAGTCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTTAATGAAGGCTCTATCCTCTGGATAACTGAACTTAGATCTCCATTGGGGTTGGTAGATGAAATTTTTGGACCAGTAAAAAATCCTTATTATTCCGTAAGATACAATTCTGAAAGTGAAGTTCCTACAGGGATTTGTGGAGGCACTCACGTCTCTTTTGTTCTGGAGTTTGCTGA
mRNA sequence
ATGCTCTTTCTTCAAGTGTCTGAGCCAGTTGTGCAGGCGAGTGTTGAGGCTTCTGATAAGTCTAGGGATTTGAATTACATAATCGAGGAAGGGATATCAAAGGTTAGTTTGGTTACTGGAAGTGGAAGCACCGGGAACATTGATTTAGAGTGTCAAAAGGATGACATTGAAAGTGATGTTGAGTCTGAGGGCACAAGTTCAGCTACAACATCCAGTAGCAGTAGCCATGGCAGAGACAGCAATGATGAAAAAGATGACGAGGAAGAAAATGCATCATCTTCTAGTAGTGGCAACAGTAGTTGCGATGAAGAAGAAGAGGAGAATGAGTTCACTGTGAAAGCAGAGGGACGTGGAGAAATCGGTGAACTCGAAGAAGGTGAGATAAGGGACATTGACATTGAAGACGAAGAGGCTTCTGCAGATCAAATGGTTGCGTGGGATGGTGGTGATGGTGAGGACCTGGACATTGATGATGATGAAGAGGCTGGTGCTGTAGGAGGGCCAATTAGTTCTAAAAATGAGCTTAAGGTTCTTCCTCCAGTTCCTCAGGTGTATGCCACACTACAGCCACACCACCAGATTCTTCCTGTTGGAGTTGTTTTGTCAATAATTGGCAGTCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTTAATGAAGGCTCTATCCTCTGGATAACTGAACTTAGATCTCCATTGGGGGATTTGTGGAGGCACTCACGTCTCTTTTGTTCTGGAGTTTGCTGA
Coding sequence (CDS)
ATGCTCTTTCTTCAAGTGTCTGAGCCAGTTGTGCAGGCGAGTGTTGAGGCTTCTGATAAGTCTAGGGATTTGAATTACATAATCGAGGAAGGGATATCAAAGGTTAGTTTGGTTACTGGAAGTGGAAGCACCGGGAACATTGATTTAGAGTGTCAAAAGGATGACATTGAAAGTGATGTTGAGTCTGAGGGCACAAGTTCAGCTACAACATCCAGTAGCAGTAGCCATGGCAGAGACAGCAATGATGAAAAAGATGACGAGGAAGAAAATGCATCATCTTCTAGTAGTGGCAACAGTAGTTGCGATGAAGAAGAAGAGGAGAATGAGTTCACTGTGAAAGCAGAGGGACGTGGAGAAATCGGTGAACTCGAAGAAGGTGAGATAAGGGACATTGACATTGAAGACGAAGAGGCTTCTGCAGATCAAATGGTTGCGTGGGATGGTGGTGATGGTGAGGACCTGGACATTGATGATGATGAAGAGGCTGGTGCTGTAGGAGGGCCAATTAGTTCTAAAAATGAGCTTAAGGTTCTTCCTCCAGTTCCTCAGGTGTATGCCACACTACAGCCACACCACCAGATTCTTCCTGTTGGAGTTGTTTTGTCAATAATTGGCAGTCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTTAATGAAGGCTCTATCCTCTGGATAACTGAACTTAGATCTCCATTGGGGGATTTGTGGAGGCACTCACGTCTCTTTTGTTCTGGAGTTTGCTGA
Protein sequence
MLFLQVSEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGDLWRHSRLFCSGVC
Homology
BLAST of Moc09g05590.1 vs. NCBI nr
Match:
XP_022150383.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia])
HSP 1 Score: 367.9 bits (943), Expect = 7.1e-98
Identity = 203/230 (88.26%), Postives = 215/230 (93.48%), Query Frame = 0
Query: 6 VSEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGT 65
VS PVVQAS+EASDKSRDLN IIEEG+SKVSLVTGSGSTGNIDLEC+KD+ ESDVESEGT
Sbjct: 98 VSVPVVQASIEASDKSRDLNGIIEEGMSKVSLVTGSGSTGNIDLECRKDESESDVESEGT 157
Query: 66 SSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEE 125
SSATTSSSSSHGR NDEKD+EEEN+SSSSS +SSCD+EEEEN+FT+KAEG GEIGELEE
Sbjct: 158 SSATTSSSSSHGRGRNDEKDEEEENSSSSSSDDSSCDDEEEENKFTMKAEGHGEIGELEE 217
Query: 126 GEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVY 185
GEIRD++ EDEEAS DQMVAWD GDG D DIDDDEE G GGPISSKNELKVLPPVPQVY
Sbjct: 218 GEIRDVEDEDEEASTDQMVAWD-GDGGDPDIDDDEEVGVEGGPISSKNELKVLPPVPQVY 277
Query: 186 ATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 236
ATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG
Sbjct: 278 ATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 326
BLAST of Moc09g05590.1 vs. NCBI nr
Match:
XP_022149469.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia] >XP_022149470.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia])
HSP 1 Score: 360.9 bits (925), Expect = 8.7e-96
Identity = 199/230 (86.52%), Postives = 213/230 (92.61%), Query Frame = 0
Query: 6 VSEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGT 65
VS PVVQAS+EASDKSRDLN IIEEG+SKVSLVTGSGSTGNIDLEC+KD+ ESDVESEGT
Sbjct: 98 VSVPVVQASIEASDKSRDLNGIIEEGMSKVSLVTGSGSTGNIDLECRKDESESDVESEGT 157
Query: 66 SSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEE 125
SSATTSSSSSHGR NDEKD+EEEN+SSSSS +SSCD+EEEEN+FT+KAEG GEIGELEE
Sbjct: 158 SSATTSSSSSHGRGRNDEKDEEEENSSSSSSDDSSCDDEEEENKFTMKAEGHGEIGELEE 217
Query: 126 GEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVY 185
GEIRD++ EDEEAS DQMVAWD GDG D DIDDDEE G GGPISSKNELKVLPPVPQVY
Sbjct: 218 GEIRDVEDEDEEASTDQMVAWD-GDGGDPDIDDDEEVGVEGGPISSKNELKVLPPVPQVY 277
Query: 186 ATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 236
ATLQP HQI+PVGVVLSIIG+QVIVEGVEKHNPLNEGSILWITE RSPLG
Sbjct: 278 ATLQPQHQIIPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLG 326
BLAST of Moc09g05590.1 vs. NCBI nr
Match:
KAG6604811.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 283.9 bits (725), Expect = 1.4e-72
Identity = 164/228 (71.93%), Postives = 191/228 (83.77%), Query Frame = 0
Query: 8 EPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSS 67
+P+ QA EA KS DLN IIEEG+SKVSLV GSTGNI+ + ++DD ESDVESEGTSS
Sbjct: 97 QPIAQAEGEACGKSTDLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSS 156
Query: 68 ATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGE 127
A+TSS SS S+D++ DEEE++SSSSSG+SSCD++ E E +VKA+ EIGELEEGE
Sbjct: 157 ASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGE 216
Query: 128 IRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYAT 187
I D D ED+EASAD MVAWD GDGE+L D+++EAG GGPISSKNELKVLPPVPQV+AT
Sbjct: 217 ISDADNEDKEASADDMVAWD-GDGEEL--DEEDEAGPEGGPISSKNELKVLPPVPQVHAT 276
Query: 188 LQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 236
LQPHHQ++PVGVVLSIIGSQVIVEGVEKHNPLNEGSILW+T RSPLG
Sbjct: 277 LQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLG 321
BLAST of Moc09g05590.1 vs. NCBI nr
Match:
XP_023533326.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 283.9 bits (725), Expect = 1.4e-72
Identity = 164/228 (71.93%), Postives = 191/228 (83.77%), Query Frame = 0
Query: 8 EPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSS 67
+P+ QA EA KS DLN IIEEG+SKVSLV GSTGNI+ + ++DD +SDVESEGTSS
Sbjct: 95 QPIAQAEGEACGKSTDLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDDSDVESEGTSS 154
Query: 68 ATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGE 127
A+TSS SS S+D++ DEEE++SSSSSG+SSCD++ E E +VKA+ EIGELEEGE
Sbjct: 155 ASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGE 214
Query: 128 IRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYAT 187
I D D ED+EASAD MVAWD GDGE+L D++EEAG GGPISSKNELKVLPPVPQV+AT
Sbjct: 215 ISDADNEDKEASADDMVAWD-GDGEEL--DEEEEAGPEGGPISSKNELKVLPPVPQVHAT 274
Query: 188 LQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 236
LQPHHQ++PVGVVLSIIGSQVIVEGVEKHNPLNEGSILW+T RSPLG
Sbjct: 275 LQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLG 319
BLAST of Moc09g05590.1 vs. NCBI nr
Match:
KAG7034929.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 283.9 bits (725), Expect = 1.4e-72
Identity = 164/228 (71.93%), Postives = 191/228 (83.77%), Query Frame = 0
Query: 8 EPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSS 67
+P+ QA EA KS DLN IIEEG+SKVSLV GSTGNI+ + ++DD ESDVESEGTSS
Sbjct: 97 QPIAQAEGEACGKSTDLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSS 156
Query: 68 ATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGE 127
A+TSS SS S+D++ DEEE++SSSSSG+SSCD++ E E +VKA+ EIGELEEGE
Sbjct: 157 ASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGE 216
Query: 128 IRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYAT 187
I D D ED+EASAD MVAWD GDGE+L D+++EAG GGPISSKNELKVLPPVPQV+AT
Sbjct: 217 ISDADNEDKEASADDMVAWD-GDGEEL--DEEDEAGPEGGPISSKNELKVLPPVPQVHAT 276
Query: 188 LQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 236
LQPHHQ++PVGVVLSIIGSQVIVEGVEKHNPLNEGSILW+T RSPLG
Sbjct: 277 LQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLG 321
BLAST of Moc09g05590.1 vs. ExPASy TrEMBL
Match:
A0A6J1D9A9 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Momordica charantia OX=3673 GN=LOC111018557 PE=3 SV=1)
HSP 1 Score: 367.9 bits (943), Expect = 3.5e-98
Identity = 203/230 (88.26%), Postives = 215/230 (93.48%), Query Frame = 0
Query: 6 VSEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGT 65
VS PVVQAS+EASDKSRDLN IIEEG+SKVSLVTGSGSTGNIDLEC+KD+ ESDVESEGT
Sbjct: 98 VSVPVVQASIEASDKSRDLNGIIEEGMSKVSLVTGSGSTGNIDLECRKDESESDVESEGT 157
Query: 66 SSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEE 125
SSATTSSSSSHGR NDEKD+EEEN+SSSSS +SSCD+EEEEN+FT+KAEG GEIGELEE
Sbjct: 158 SSATTSSSSSHGRGRNDEKDEEEENSSSSSSDDSSCDDEEEENKFTMKAEGHGEIGELEE 217
Query: 126 GEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVY 185
GEIRD++ EDEEAS DQMVAWD GDG D DIDDDEE G GGPISSKNELKVLPPVPQVY
Sbjct: 218 GEIRDVEDEDEEASTDQMVAWD-GDGGDPDIDDDEEVGVEGGPISSKNELKVLPPVPQVY 277
Query: 186 ATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 236
ATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG
Sbjct: 278 ATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 326
BLAST of Moc09g05590.1 vs. ExPASy TrEMBL
Match:
A0A6J1D5T5 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Momordica charantia OX=3673 GN=LOC111017890 PE=3 SV=1)
HSP 1 Score: 360.9 bits (925), Expect = 4.2e-96
Identity = 199/230 (86.52%), Postives = 213/230 (92.61%), Query Frame = 0
Query: 6 VSEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGT 65
VS PVVQAS+EASDKSRDLN IIEEG+SKVSLVTGSGSTGNIDLEC+KD+ ESDVESEGT
Sbjct: 98 VSVPVVQASIEASDKSRDLNGIIEEGMSKVSLVTGSGSTGNIDLECRKDESESDVESEGT 157
Query: 66 SSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEE 125
SSATTSSSSSHGR NDEKD+EEEN+SSSSS +SSCD+EEEEN+FT+KAEG GEIGELEE
Sbjct: 158 SSATTSSSSSHGRGRNDEKDEEEENSSSSSSDDSSCDDEEEENKFTMKAEGHGEIGELEE 217
Query: 126 GEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVY 185
GEIRD++ EDEEAS DQMVAWD GDG D DIDDDEE G GGPISSKNELKVLPPVPQVY
Sbjct: 218 GEIRDVEDEDEEASTDQMVAWD-GDGGDPDIDDDEEVGVEGGPISSKNELKVLPPVPQVY 277
Query: 186 ATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 236
ATLQP HQI+PVGVVLSIIG+QVIVEGVEKHNPLNEGSILWITE RSPLG
Sbjct: 278 ATLQPQHQIIPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLG 326
BLAST of Moc09g05590.1 vs. ExPASy TrEMBL
Match:
A0A6J1G6M0 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucurbita moschata OX=3662 GN=LOC111451307 PE=3 SV=1)
HSP 1 Score: 282.7 bits (722), Expect = 1.5e-72
Identity = 164/228 (71.93%), Postives = 190/228 (83.33%), Query Frame = 0
Query: 8 EPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSS 67
+P QA EA KS DLN IIEEG+SKVSLV GSTGNI+ + ++DD ESDVESEGTSS
Sbjct: 97 QPTAQAEGEACGKSTDLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSS 156
Query: 68 ATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGE 127
A+TSS SS S+D++ DEEE++SSSSSG+SSCD++ E E +VKA+ EIGELEEGE
Sbjct: 157 ASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGE 216
Query: 128 IRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYAT 187
I D D ED+EASAD MVAWD GDGE+L D+++EAG GGPISSKNELKVLPPVPQV+AT
Sbjct: 217 ISDADNEDKEASADDMVAWD-GDGEEL--DEEDEAGPEGGPISSKNELKVLPPVPQVHAT 276
Query: 188 LQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 236
LQPHHQ++PVGVVLSIIGSQVIVEGVEKHNPLNEGSILW+T RSPLG
Sbjct: 277 LQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLG 321
BLAST of Moc09g05590.1 vs. ExPASy TrEMBL
Match:
A0A6J1I505 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucurbita maxima OX=3661 GN=LOC111469679 PE=3 SV=1)
HSP 1 Score: 278.9 bits (712), Expect = 2.1e-71
Identity = 165/229 (72.05%), Postives = 190/229 (82.97%), Query Frame = 0
Query: 8 EPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSS 67
+P+ QA EA KS DLN IIEEG+SKVSLV GSTGNI+ + ++DD ESD ESEGTSS
Sbjct: 95 QPIAQAGGEACAKSTDLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDESDAESEGTSS 154
Query: 68 ATTSS-SSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEG 127
A+TSS SSS S+D KDD+EE++SSSSSG+SSC ++ E E +VKA+ EIGELEEG
Sbjct: 155 ASTSSDSSSSSGSSDDGKDDDEESSSSSSSGDSSCHDDVETKENSVKADVHTEIGELEEG 214
Query: 128 EIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYA 187
EI D D ED+EASAD MVAWD GDGE+L D++EEAG GGPISSKNELKVLPPVPQV+A
Sbjct: 215 EISDADNEDKEASADDMVAWD-GDGEEL--DEEEEAGPEGGPISSKNELKVLPPVPQVHA 274
Query: 188 TLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 236
TLQPHHQ++PVGVVLSIIGSQVIVEGVEKHNPLNEGSILW+T RSPLG
Sbjct: 275 TLQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLG 320
BLAST of Moc09g05590.1 vs. ExPASy TrEMBL
Match:
A0A5A7TE26 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00720 PE=3 SV=1)
HSP 1 Score: 273.9 bits (699), Expect = 6.8e-70
Identity = 162/231 (70.13%), Postives = 189/231 (81.82%), Query Frame = 0
Query: 11 VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATT 70
+QAS EA S DLN IIEEG+SKVSLV G T ++LE + DD ESDVESEGTSS +T
Sbjct: 106 MQASGEACSNSTDLNSIIEEGMSKVSLVLDGGCTSKVELESEVDDGESDVESEGTSSVST 165
Query: 71 SSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIRD 130
SSSSS G S++E ++EEE++SSSSSG D ++EE E+ V+AEG+ EIGELEEGEIRD
Sbjct: 166 SSSSSSGGSSDNEVEEEEESSSSSSSG----DYDDEEEEYIVEAEGKREIGELEEGEIRD 225
Query: 131 IDIEDEEASADQMVAWDGGDGEDLDIDD------DEEAGAVGGPISSKNELKVLPPVPQV 190
D EDEEASAD MVAWD DGEDLD DD +EEAGA GGPI+SKNELKVLPPVPQV
Sbjct: 226 ADDEDEEASADDMVAWD-NDGEDLDGDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQV 285
Query: 191 YATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLG 236
+ATLQPHH++LPVGVVLS++G+QVIVEG+EKHNPL+EGSILWITE RSPLG
Sbjct: 286 HATLQPHHKMLPVGVVLSMLGNQVIVEGIEKHNPLSEGSILWITEARSPLG 331
BLAST of Moc09g05590.1 vs. TAIR 10
Match:
AT1G03530.1 (nuclear assembly factor 1 )
HSP 1 Score: 135.2 bits (339), Expect = 7.3e-32
Identity = 104/258 (40.31%), Postives = 143/258 (55.43%), Query Frame = 0
Query: 7 SEPVVQASVEASDKSRDLN------------YIIEEGISKVSLVTGSGSTGNIDLECQKD 66
+EPVV + + + DL+ IE G+ KVSL + + + + D
Sbjct: 185 TEPVVVSDASVACPTMDLDESGLKKTDEGLACSIEVGLEKVSLAVDDDEKSD-EAKGEMD 244
Query: 67 DIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKA 126
ES+ E+ +S++++ SSSS +S++++ D+EEN ++EE+ E V
Sbjct: 245 SAESESETSSSSASSSDSSSSEEEESDEDESDKEEN------------KKEEKFEHMVVG 304
Query: 127 EGRGEIGELEEGEIR-------DIDIEDEEASAD----------QMVAWDGGDGEDLDID 186
+ GELEEGEI D DIEDE+ D +MVAW + +DL +
Sbjct: 305 KEDDLAGELEEGEIENLDEENGDDDIEDEDDDDDDDDDDDDDVNEMVAWSNDEDDDLGLQ 364
Query: 187 DDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGVEKHN 236
E PI SKNELK LPPVP V TL+PHH LPVGVVLS++ +QVIVEG+EKH+
Sbjct: 365 TKE-------PIRSKNELKELPPVPPVDVTLEPHHATLPVGVVLSVMSAQVIVEGMEKHS 422
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150383.1 | 7.1e-98 | 88.26 | H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia] | [more] |
XP_022149469.1 | 8.7e-96 | 86.52 | H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia]... | [more] |
KAG6604811.1 | 1.4e-72 | 71.93 | H/ACA ribonucleoprotein complex non-core subunit NAF1, partial [Cucurbita argyro... | [more] |
XP_023533326.1 | 1.4e-72 | 71.93 | H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita pepo subsp. pep... | [more] |
KAG7034929.1 | 1.4e-72 | 71.93 | H/ACA ribonucleoprotein complex non-core subunit NAF1, partial [Cucurbita argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D9A9 | 3.5e-98 | 88.26 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Momordica charantia OX=... | [more] |
A0A6J1D5T5 | 4.2e-96 | 86.52 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Momordica charantia OX=... | [more] |
A0A6J1G6M0 | 1.5e-72 | 71.93 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1I505 | 2.1e-71 | 72.05 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucurbita maxima OX=366... | [more] |
A0A5A7TE26 | 6.8e-70 | 70.13 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuw... | [more] |
Match Name | E-value | Identity | Description | |
AT1G03530.1 | 7.3e-32 | 40.31 | nuclear assembly factor 1 | [more] |