Moc08g36030.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g36030.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Calcium-binding EF-hand family protein
Location	chr8: 26603050 .. 26603304 (+)
Sequence length	255
RNA-Seq Expression	Moc08g36030.1
Synteny	Moc08g36030.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATAGTAGCGGCGTAAGCGCAGAGGAATGCGAGCGAGTGTTCAAGCGATTCGACGCGAACGGCGACGGGAAGATATCGGCGACGGAGCTGGGAGACGCATTGAAGGGGTTCGGAGTGAGCACTGAGGACGCGAAGACGATGATGGACGCCATTGATAAGGATGGCGATGGATTCATTTCGCTGGATGAGTTCTCGGATTTCGCCAAGGACAATCGCGCCTTGATGAAGGATTTCGCCAAGGCCTTTTAG

mRNA sequence

ATGGCGGATAGTAGCGGCGTAAGCGCAGAGGAATGCGAGCGAGTGTTCAAGCGATTCGACGCGAACGGCGACGGGAAGATATCGGCGACGGAGCTGGGAGACGCATTGAAGGGGTTCGGAGTGAGCACTGAGGACGCGAAGACGATGATGGACGCCATTGATAAGGATGGCGATGGATTCATTTCGCTGGATGAGTTCTCGGATTTCGCCAAGGACAATCGCGCCTTGATGAAGGATTTCGCCAAGGCCTTTTAG

Coding sequence (CDS)

ATGGCGGATAGTAGCGGCGTAAGCGCAGAGGAATGCGAGCGAGTGTTCAAGCGATTCGACGCGAACGGCGACGGGAAGATATCGGCGACGGAGCTGGGAGACGCATTGAAGGGGTTCGGAGTGAGCACTGAGGACGCGAAGACGATGATGGACGCCATTGATAAGGATGGCGATGGATTCATTTCGCTGGATGAGTTCTCGGATTTCGCCAAGGACAATCGCGCCTTGATGAAGGATTTCGCCAAGGCCTTTTAG

Protein sequence

MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGFISLDEFSDFAKDNRALMKDFAKAF

Homology

[Close]

BLAST of Moc08g36030.1 vs. NCBI nr
Match: XP_022143412.1 (polcalcin Bra n 2-like [Momordica charantia])

HSP 1 Score: 166.0 bits (419), Expect = 1.4e-37
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF
Sbjct: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60

Query: 61 ISLDEFSDFAKDNRALMKDFAKAF 85
          ISLDEFSDFAKDNRALMKDFAKAF
Sbjct: 61 ISLDEFSDFAKDNRALMKDFAKAF 84

[Close]

BLAST of Moc08g36030.1 vs. NCBI nr
Match: XP_016902062.1 (PREDICTED: polcalcin Bra n 2-like [Cucumis melo])

HSP 1 Score: 142.9 bits (359), Expect = 1.3e-30
Identity = 72/84 (85.71%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MAD SGV++ +CER+FKRFDANGDGKISATELGDAL GFGVS+EDAK MMDAIDKDGDG+
Sbjct: 1  MAD-SGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGY 60

Query: 61 ISLDEFSDFAKDNRALMKDFAKAF 85
          IS  EFSDFAKDNRALMKDFAKAF
Sbjct: 61 ISFQEFSDFAKDNRALMKDFAKAF 83

[Close]

BLAST of Moc08g36030.1 vs. NCBI nr
Match: XP_038874793.1 (probable calcium-binding protein CML28 [Benincasa hispida])

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 5  SGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGFISLD 64
          SGVSA +CER+FKRFDANGDGKISATELGDAL GFGVS EDAK MMDAIDKDGDG IS +
Sbjct: 4  SGVSAADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFE 63

Query: 65 EFSDFAKDNRALMKDFAKAF 85
          EF++FAKDNRALMKDFAKAF
Sbjct: 64 EFAEFAKDNRALMKDFAKAF 83

[Close]

BLAST of Moc08g36030.1 vs. NCBI nr
Match: XP_022948513.1 (probable calcium-binding protein CML28 [Cucurbita moschata] >XP_022998721.1 probable calcium-binding protein CML28 [Cucurbita maxima] >XP_023523664.1 probable calcium-binding protein CML28 [Cucurbita pepo subsp. pepo] >KAG6607008.1 Polcalcin Nic t 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036707.1 Polcalcin Nic t 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 136.0 bits (341), Expect = 1.5e-28
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MAD +GV + ECER+FKRFDANGDG+ISATELGDAL G GVS+EDAK MMDAIDKDGDGF
Sbjct: 1  MAD-NGVDSAECERIFKRFDANGDGQISATELGDALNGIGVSSEDAKRMMDAIDKDGDGF 60

Query: 61 ISLDEFSDFAKDNRALMKDFAKAF 85
          IS  EF +FAKDNRALMKDFAKAF
Sbjct: 61 ISFQEFFEFAKDNRALMKDFAKAF 83

[Close]

BLAST of Moc08g36030.1 vs. NCBI nr
Match: XP_004149790.1 (probable calcium-binding protein CML28 [Cucumis sativus] >KGN57835.1 hypothetical protein Csa_010503 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 7.6e-28
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MAD SGV++ + ER+FKRFDANGDGKISATELGDAL  FGVS+EDAK MMDAIDKDGDG+
Sbjct: 1  MAD-SGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGY 60

Query: 61 ISLDEFSDFAKDNRALMKDFAKAF 85
          IS  EF DFAKDNRALMKDFAKAF
Sbjct: 61 ISFQEFFDFAKDNRALMKDFAKAF 83

[Close]

BLAST of Moc08g36030.1 vs. ExPASy Swiss-Prot
Match: P69199 (Polcalcin Bra r 2 OS=Brassica campestris OX=3711 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-20
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD++     E +R+FK+FDANGDGKISA+ELGDALK  G V+ +D K MM  ID DGDG
Sbjct: 1  MADAT--EKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAKAF 85
          +IS  EFSDFA  NR LMKD AK F
Sbjct: 61 YISYQEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of Moc08g36030.1 vs. ExPASy Swiss-Prot
Match: P69198 (Polcalcin Bra n 2 OS=Brassica napus OX=3708 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-20
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD++     E +R+FK+FDANGDGKISA+ELGDALK  G V+ +D K MM  ID DGDG
Sbjct: 1  MADAT--EKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAKAF 85
          +IS  EFSDFA  NR LMKD AK F
Sbjct: 61 YISYQEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of Moc08g36030.1 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-19
Identity = 51/85 (60.00%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD       E ER+FKRFDANGDGKISA ELG+ALK  G ++ ++ K MM  ID DGDG
Sbjct: 1  MADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAKAF 85
          FIS  EF+DF + NR L+KD AK F
Sbjct: 61 FISFQEFTDFGRANRGLLKDVAKIF 85

[Close]

BLAST of Moc08g36030.1 vs. ExPASy Swiss-Prot
Match: Q9SRP7 (Probable calcium-binding protein CML28 OS=Arabidopsis thaliana OX=3702 GN=CML28 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-19
Identity = 54/85 (63.53%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD++     E +R+FK+FDANGDGKISA ELGDALK  G V+ ED K MM  ID DGDG
Sbjct: 1  MADAT--EKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAKAF 85
          +IS  EF DFA  NR LMKD AK F
Sbjct: 61 YISYQEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of Moc08g36030.1 vs. ExPASy Swiss-Prot
Match: O81701 (Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-19
Identity = 52/85 (61.18%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD       E ER+FK FDANGDGKISA+ELGDALK  G V+ ++ K MM  ID DGDG
Sbjct: 1  MADDHPQDQAEHERIFKCFDANGDGKISASELGDALKTLGSVTPDEVKHMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAKAF 85
          FIS  EF++FA+ NR L+KD AK F
Sbjct: 61 FISFQEFTNFARANRGLVKDVAKIF 85

[Close]

BLAST of Moc08g36030.1 vs. ExPASy TrEMBL
Match: A0A6J1CQR0 (polcalcin Bra n 2-like OS=Momordica charantia OX=3673 GN=LOC111013292 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.7e-38
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF
Sbjct: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60

Query: 61 ISLDEFSDFAKDNRALMKDFAKAF 85
          ISLDEFSDFAKDNRALMKDFAKAF
Sbjct: 61 ISLDEFSDFAKDNRALMKDFAKAF 84

[Close]

BLAST of Moc08g36030.1 vs. ExPASy TrEMBL
Match: A0A1S4E1G1 (polcalcin Bra n 2-like OS=Cucumis melo OX=3656 GN=LOC103496835 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.1e-31
Identity = 72/84 (85.71%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MAD SGV++ +CER+FKRFDANGDGKISATELGDAL GFGVS+EDAK MMDAIDKDGDG+
Sbjct: 1  MAD-SGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGY 60

Query: 61 ISLDEFSDFAKDNRALMKDFAKAF 85
          IS  EFSDFAKDNRALMKDFAKAF
Sbjct: 61 ISFQEFSDFAKDNRALMKDFAKAF 83

[Close]

BLAST of Moc08g36030.1 vs. ExPASy TrEMBL
Match: A0A6J1KB11 (probable calcium-binding protein CML28 OS=Cucurbita maxima OX=3661 GN=LOC111493300 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.5e-29
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MAD +GV + ECER+FKRFDANGDG+ISATELGDAL G GVS+EDAK MMDAIDKDGDGF
Sbjct: 1  MAD-NGVDSAECERIFKRFDANGDGQISATELGDALNGIGVSSEDAKRMMDAIDKDGDGF 60

Query: 61 ISLDEFSDFAKDNRALMKDFAKAF 85
          IS  EF +FAKDNRALMKDFAKAF
Sbjct: 61 ISFQEFFEFAKDNRALMKDFAKAF 83

[Close]

BLAST of Moc08g36030.1 vs. ExPASy TrEMBL
Match: A0A6J1G9I0 (probable calcium-binding protein CML28 OS=Cucurbita moschata OX=3662 GN=LOC111452170 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.5e-29
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MAD +GV + ECER+FKRFDANGDG+ISATELGDAL G GVS+EDAK MMDAIDKDGDGF
Sbjct: 1  MAD-NGVDSAECERIFKRFDANGDGQISATELGDALNGIGVSSEDAKRMMDAIDKDGDGF 60

Query: 61 ISLDEFSDFAKDNRALMKDFAKAF 85
          IS  EF +FAKDNRALMKDFAKAF
Sbjct: 61 ISFQEFFEFAKDNRALMKDFAKAF 83

[Close]

BLAST of Moc08g36030.1 vs. ExPASy TrEMBL
Match: A0A0A0L775 (Putative calcium-binding protein CML28 OS=Cucumis sativus OX=3659 GN=Csa_3G345360 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.7e-28
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MAD SGV++ + ER+FKRFDANGDGKISATELGDAL  FGVS+EDAK MMDAIDKDGDG+
Sbjct: 1  MAD-SGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGY 60

Query: 61 ISLDEFSDFAKDNRALMKDFAKAF 85
          IS  EF DFAKDNRALMKDFAKAF
Sbjct: 61 ISFQEFFDFAKDNRALMKDFAKAF 83

[Close]

BLAST of Moc08g36030.1 vs. TAIR 10
Match: AT3G03430.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-20
Identity = 54/85 (63.53%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD++     E +R+FK+FDANGDGKISA ELGDALK  G V+ ED K MM  ID DGDG
Sbjct: 1  MADAT--EKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAKAF 85
          +IS  EF DFA  NR LMKD AK F
Sbjct: 61 YISYQEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of Moc08g36030.1 vs. TAIR 10
Match: AT5G17480.1 (pollen calcium-binding protein 1 )

HSP 1 Score: 89.0 bits (219), Expect = 2.0e-18
Identity = 51/85 (60.00%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD++     E +R+FK+FDANGDGKISA EL +ALK  G V+ +D K MM  ID DGDG
Sbjct: 1  MADAT--EKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAKAF 85
           IS  EF+DFA  NR LMKD AK F
Sbjct: 61 NISYQEFTDFAGANRGLMKDVAKIF 83

[Close]

BLAST of Moc08g36030.1 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 60.8 bits (146), Expect = 5.9e-10
Identity = 38/85 (44.71%), Postives = 50/85 (58.82%), Query Frame = 0


Query: 8  SAEECERVFKRFDANGDGKISATELGDALKGF--GVSTEDAKTMMDAIDKDGDGFISLDE 67
          S E+ ++VF+RFD N DGKIS  EL D +       S E+ K MM   D DG+GFI LDE
Sbjct: 12 SMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDE 71

Query: 68 F------SDFAKDNRALMKDFAKAF 85
          F      SD + +N A+ +D  +AF
Sbjct: 72 FVALFQISDQSSNNSAI-RDLKEAF 95

[Close]

BLAST of Moc08g36030.1 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family )

HSP 1 Score: 60.5 bits (145), Expect = 7.7e-10
Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 11 ECERVFKRFDANGDGKISATELGDALKGFGVS--TEDAKTMMDAIDKDGDGFISLDEFSD 70
          E ++VF +FDANGDGKIS +ELG+  K  G S   E+   ++D ID D DGFI+ +EF+ 
Sbjct: 20 ELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFAT 79

Query: 71 FAKDNRALMK 79
            + + + ++
Sbjct: 80 ICRSSSSAVE 89

[Close]

BLAST of Moc08g36030.1 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 59.3 bits (142), Expect = 1.7e-09
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 10 EECERVFKRFDANGDGKISATELGDALKGFGVS-TE-DAKTMMDAIDKDGDGFISLDEFS 69
          EE ++VF +FD+NGDGKIS  ELG   K  G S TE +   +++ +D D DG+I+LDEFS
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 70 DFAKDN 74
             + +
Sbjct: 82 TLCRSS 87

The following BLAST results are available for this feature:

BLAST of Moc08g36030.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143412.1	1.4e-37	100.00	polcalcin Bra n 2-like [Momordica charantia]	[more]
XP_016902062.1	1.3e-30	85.71	PREDICTED: polcalcin Bra n 2-like [Cucumis melo]	[more]
XP_038874793.1	1.1e-29	86.25	probable calcium-binding protein CML28 [Benincasa hispida]	[more]
XP_022948513.1	1.5e-28	82.14	probable calcium-binding protein CML28 [Cucurbita moschata] >XP_022998721.1 prob...	[more]
XP_004149790.1	7.6e-28	82.14	probable calcium-binding protein CML28 [Cucumis sativus] >KGN57835.1 hypothetica...	[more]

BLAST of Moc08g36030.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P69199	6.1e-20	63.53	Polcalcin Bra r 2 OS=Brassica campestris OX=3711 PE=1 SV=1	[more]
P69198	6.1e-20	63.53	Polcalcin Bra n 2 OS=Brassica napus OX=3708 PE=1 SV=1	[more]
Q39419	1.4e-19	60.00	Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1	[more]
Q9SRP7	1.8e-19	63.53	Probable calcium-binding protein CML28 OS=Arabidopsis thaliana OX=3702 GN=CML28 ...	[more]
O81701	3.9e-19	61.18	Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1	[more]

BLAST of Moc08g36030.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQR0	6.7e-38	100.00	polcalcin Bra n 2-like OS=Momordica charantia OX=3673 GN=LOC111013292 PE=4 SV=1	[more]
A0A1S4E1G1	6.1e-31	85.71	polcalcin Bra n 2-like OS=Cucumis melo OX=3656 GN=LOC103496835 PE=4 SV=1	[more]
A0A6J1KB11	7.5e-29	82.14	probable calcium-binding protein CML28 OS=Cucurbita maxima OX=3661 GN=LOC1114933...	[more]
A0A6J1G9I0	7.5e-29	82.14	probable calcium-binding protein CML28 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A0A0L775	3.7e-28	82.14	Putative calcium-binding protein CML28 OS=Cucumis sativus OX=3659 GN=Csa_3G34536...	[more]

BLAST of Moc08g36030.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03430.1	1.3e-20	63.53	Calcium-binding EF-hand family protein	[more]
AT5G17480.1	2.0e-18	60.00	pollen calcium-binding protein 1	[more]
AT1G66400.1	5.9e-10	44.71	calmodulin like 23	[more]
AT1G73630.1	7.7e-10	42.86	EF hand calcium-binding protein family	[more]
AT1G18210.1	1.7e-09	46.97	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 11..39 e-value: 1.2E-4 score: 31.4 coord: 45..73 e-value: 0.0097 score: 25.1
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 10..70 e-value: 1.1E-12 score: 48.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 7..42 score: 15.685013
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 44..76 score: 12.504936
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 11..71 e-value: 1.20918E-14 score: 60.2541
None	No IPR available	GENE3D	1.10.238.10		coord: 3..81 e-value: 5.1E-21 score: 77.2
None	No IPR available	PANTHER	PTHR23064:SF60	POLCALCIN NIC T 1	coord: 11..84
None	No IPR available	PANTHER	PTHR23064	TROPONIN	coord: 11..84
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 20..32
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 54..66
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 8..72

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc08g36030	Moc08g36030	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc08g36030.1.exon1	Moc08g36030.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc08g36030.1	cds.Moc08g36030.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc08g36030.1	Moc08g36030.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding