Moc08g12320.1 (mRNA) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTACACCGGTCTATCGAGTTGAGGAGGGAAAGACTCGTGTTTTTGGGAATTGGTTCATATGTCGCTCTCAATTTTATCCGACAACGTAAGTTATGCTCACCTTCGTTAAATTTTAATTTGTCTAGTATGGTTTAATCATTTTTTTTATATAAATTTAATCAAGTTATTGGTGACATATTTTCTATTTACAAAATAATAAGGTAGATATTTTCTATTTAACTTACCGTGCTAGATAAAGTAATACTTTATAAAAAAAAAATGAGTGGATTTTCAAGCGGGTAAAATATAACTTAGAGATTGCAGTGGTCGGACAGAGTTAATAAAACTATATAGATTAAATTGAAATTTTCGCCATAAATTGAAGTTAAACTCAGACCACATCAACCAAATTTTAAATTTTAAAATCATATAAAATAAATCAATAATTTAACCTAATTTTATTTTTAAAAAACTTTACATGAATAAATTATTATAGTTAATTTTTCATTTAAAAATCCATGGGTGGCTGGTCTAAATTGACTAAGATTAATTAAGAATGAATGAGTTCAAACACCATGATAACCACCTAACTTAGGAATTAGTATAATCATGCATTTTAAGGTGTCAAATTCAAAATTTGAAAACATTGAAAACATAAAAATATTATTTTCAAAATTTCCAGATCATAGAATATGAAAATAGTGTTCAAAATAAATCTAACAAACGCATATTCACTGAATTTACCTAAAAGTAAAATTAAAATCTACTTGCCAACTTGAGTTTTTGATTAAGACACACATATGTTCGACCAATAAGTCATAAGTTCAAATCGATGTTCTCACCGTTACCAATAGTGTGGTATTCAAAAATAAAATAAAATAGGTACACTAAGCCAAATATGGCTTTTATTTATAACACTACTAAATGATTTTGTGTAGGAAGGAAGAAATCCTTCCCATATAGTTTTGAACAAGCACAACAGTCATGCAAATATAATATAGTCCTGAACAACAAGCATTTTGGGGATGACTCGTCTTTAAAAAAGATTTCAAATGTGTATTATATAACAACTGCAATAATCTTATACATTTTTTCTTGCATGAACCAATATTTATCCAACCAAATCCATTTAAATCTAAGGGTCCGCTTGATAACGTTTTGTTTCTTCATTTTTAACGAGGAAAAATGAATTGCTTGGATCCAACATCTATGAATTCAAATATGATAAAACAATCTTTTCATTTATGTCTTGGATAAATCGAGAATAGTAACAAGAAAGAAGAAACTTGTTTTGGTTGTTTCGAGAATTTGTATACAATTGTGAGAATGTTTCTAAAAAGGAAAAAACAAGAAACAAAATTAGTTACAAAATTCTTAGAATTCTTAAGAAAATTGGAAACGATAACCTTACCAGACGAGCCTTAAAAGTCATAACTCGAAAGTTTTAGAAATTAATGTTTCCGCCTTAATCTGGCCTTTGCAATATCTAGTATCATGGCATCTATCCCACAGATTGTTGCAACTAAGAGTGGGACATTTGGTAATGAAATTTATTAGCATTCTTCTTTTGTTTGTTTCTTTAGTATTCATAGCACCTTTCGATAGCTAAAGAGTAAATAGATTCCGTATTAGTGATAGCTCAAATATATCTATTTCATCAATGTATTTTGGATGTAGCTAGAGTAGGCAATGTCAAAGTTCCCTTCATGGAAATGCATGTGCACATCTAAGTCTAAAATTTCTTCTCCTGAACTAAATAGATTGATAAAATGATGACATGATATTTCAATCAAACCTATAGTAAGGGCCTGCGTGTGCGTATTAAAGTCTACTCTGTACTGTTTCGGCCACCTCTACTTGAAATGATCTGACACCAACCCGAAAGTCTAAAAGATCCATTCTTAAAAAATTGTTGATTTTTTTTTAACTATGTGGCCTTGCGGACAATATCATATCATTGTGAAGATGCTCGAGGTACTTGGGGTACCGTTGTCGTGGTATTAGAGCCATGGTCTAAACCTAACTATGTCGGTGAATCATCGAGTGCTGAACAAAGAAGTGGCGAGTCTCATAGGATATAGTTATAGTGTAATATGTAAGTGTGCTCTATCAAAGTATGACGACGGCGTAGTTCCTATCTGAGAGTAGACGAATGAGTAATTGTTTGAAGAAAGATTCGGTGGCACTTTATTTGAGGAAATGATTATTGAATTTGCTCGTCTTGTTACAAGTCCAGAGGGAGAAAAGTTTTTATAATTACTTTAATAATAGTAAGAATAGACTTGCCTCTTATGCTCAAAAACACCAAAGAGAATGTGAAGCACCCTCCCTCAATTATTCTTAGCCAATTTTCCCTCCTCTCACATACTCAACCCCAATAACTCTTGGATGTGTATTTTTTTTTATCATTAACAAAAACCTTATAACCAATGATTATTTAATGATTTAAATATTGTGAGAATAATAAAAATTACCGATGATTATTTAATGTATTGATTCATTTTGATCAATCTAAACTCAATCACAATTACAATCTAATGCGTTGAATACGAGTTGATCCAACTCAATTTCAAATAATATCTTAAAACCACCCACGAGACTGAAACAAACTAATCGTAAGATCCATATAATTGGGTCATTTTCACAACTCTAGAAATGTAAATTTTTAATTATTACAATTAGAAGTTTTTAATGGGAGAAAGAGGATTAAACTATTAGGGACATTTGGTCTTGAGTTTGGCACAAATTGGCTTGAATATCTCACCATCCCTTGAAACCTTGGAGTAGAACAGCGCTCTACCCCACATATTTTTAAATTAAACACCAAAGATCTCTATCTCATAATTGGCAGTCGTTTCAATTTTCAACTCTAATCTCCACTACGTCTATTTTTATCTGTGCTTTCTCTTTATCTTTCTCCATTTTTATCTGTACTTTCTCTTTATCTTTCTCCATAATCTCTTTTTCTTTATATCTATGCATCTGGCATCGATCTCACATATGACCACCCACGAAAAAAGCAAAAAAAAAAAAAACATCAATTAAGCAAATATCAAGTTCAAAATGAATAAATTAACTGCCTCTTTAAATGGTAAAAAAAAGTTGACATCGATTTCACATATGACCATCCACGAAAAAAAACATAAATTAAACAAATATCAAATTCAAAATGAATAAATTAACTACCTCTTTAAATGGTAAAAAAAGGTTAATTATATTAAAGTAAAAAACAACATCAAATGACCCAAACTTCAGACTACATAACATAAATTCATGCTACACAAACTTACCTCCCGAATACAGGCTACACAACTCCTCAGAATTTACCAAGCTCAAAATTTTCAGATTTAAAATGCTATTAAAAATAGTAATAGAAATCTACCACTTTGCATAATTTAATTTAAAAAGTCACATTTGAACTTCACTTAACCATAAGGCCATAACCCTAGAGTAAAAAGAAAAGGTAGAAAAAAAAAAGAAAAGGAATAGCCGTAATTACTGCACTATCAAACTACTCAATGCCAGCTAAAAAGCTACACGCCTTCATCATTTTCCTTTGTCGGGAAAAGAAAAAATTCCAATTTTAATTTTTTCAATTTCCCAAAAAAAAAACCCCCCCAAAACGACGTCGTTTTCTCTGGTCGTCGCCCCTGCTATAAATCGAACCCATCTCCATTCTAACGCTTTTCTCCCCTCCCGTGGCGGTGGCTCAAAGCTCCAGCTTTTTTATCATCTCTTCCTTTGCCCCGGGTTCCTTCAGGTCAATTTCTCTCTCTCTACAAACCCATCTGATCTTACTCTATTTTTAACAATATCCACACTGATTTTTCCCCCTTTGTATGTCAAAATCATTTGAGGGTTGCTATGGATTTAAAACCAAAAACAAAAAAACAAATAAAAAGGAAAAAAATTTGCATTTGGTCTTTTTTTCCTCCGGCCGTTGTGTGATTTTTCTATATTTGGTCGAGATTTGCTACCCCTTCGTCTCGTTTTTCCCGGATCTGGACGATTCTTAGCTGGTCTTCTCCATTTTAATTTTGATTTTGTTGTTTAAAGCTGTCTCCAGGATTTTCTTCGGGTCAAGATCCCTAATTCCCAAATCTATATATCCGATGTTGTGGTCTTTGCCTTGGTTTTGTCCTCGCAAGGGAAAGGAGAGACCAAACTCGCTTTTAACTTGATTCTGAAAAAGGTTTGAGGGTTTTTTTTTTTTTTTTTTTCAGGATCTGTTCTTTGTTTTCGTGGTTTTCAAGGTCTAGATCTCAGATCTGTAGGTTTTAATGGAAGATCTTGTTTGGGTTTCGTGAAAAGGTCTAGATGGTTCTAAGTTTGGTGAAGAAATGTTGTGAATTTGGGTTTCTGTTCATGATTTGATCAGTTCTGCGAAATTTTGATTTTTACCTCAGATCTGTTGGTCATCAACACTTTGAGATTTGGATCTGTTGTTTGGCTATACGATCTGTTATCCTTTGTTACCATATGAGATTTTTGAGCTTTGATAGGATAGACTTTTGACAATTTTTCCATTAGATCTGACTATGTATTAGGATTTTTGTATCTCAACTTCGTTTTTCTCTATCGTGTAGGCGTTCTTCTGCAGATCAGCCAGTTTCAAAGATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACTAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCGACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGGCAAGTTCTTTCTCATTCCTCATATTGTTTTGGCCATTAGTTATAGAAACTGATAACTCTTTGACCTTATAGCCGAACATATATTAAAGGCTAAATATATGTTTTAGTCTAACATATTTTGGTGTTTCTTCAATTAGTATAACAAGTTTCAATTTAGTCCGTTGTTTTTTAACACATTTAAGTTGATGTGACTGATTATAATTTAGTGAGTTTAGAGATGAACTAAAAACTTCTTTCTTAGATGGCCAATGCCTTGTAAGCTTATCATCAACTAACTTTAACATTCATTGACCAAAGGGTGTAATTGAGAAATGTTAAAACATTAGGAACTAAATTGTAAAATATCCAAAAAATTAAGGGCTAAAACATATATTTCTGAAATTGATTGTGTCTTGTCCATTTACTAAAAGCTTAGGAGAGATTTAAATTTGTCACAGCTTTTGATCGAAGTACAAGCATCCTTTTTTGGTATTTCACATGTTTTCAGTTTCTTATAGAAAGTCTTTTGTGTTTCACTTCCTTTCAATTATTTCTCTCTTGAAGGTTTGTTGTCTAGATCTCAGACTTTCTTTTTCGTACGTCTTTACAATATGATTGATTGTATCCTTGAATTATGCCATAGGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCTTCGAACCCATTAATCCAGGATGCCCGGTTTGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATCATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAGCCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCTTAA ATGCTACACCGGTCTATCGAGTTGAGGAGGGAAAGACTCGTGTTTTTGGGAATTGGTTCATATGTCGCTCTCAATTTTATCCGACAACGTCTAGATCTCAGATCTGTAGGTTTTAATGGAAGATCTTGTTTGGGTTTCGTGAAAAGGCGTTCTTCTGCAGATCAGCCAGTTTCAAAGATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACTAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCGACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCTTCGAACCCATTAATCCAGGATGCCCGGTTTGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATCATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAGCCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCTTAA ATGCTACACCGGTCTATCGAGTTGAGGAGGGAAAGACTCGTGTTTTTGGGAATTGGTTCATATGTCGCTCTCAATTTTATCCGACAACGTCTAGATCTCAGATCTGTAGGTTTTAATGGAAGATCTTGTTTGGGTTTCGTGAAAAGGCGTTCTTCTGCAGATCAGCCAGTTTCAAAGATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACTAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCGACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCTTCGAACCCATTAATCCAGGATGCCCGGTTTGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATCATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAGCCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCTTAA MLHRSIELRRERLVFLGIGSYVALNFIRQRLDLRSVGFNGRSCLGFVKRRSSADQPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA Homology
BLAST of Moc08g12320.1 vs. NCBI nr
Match: XP_022148186.1 (uncharacterized protein LOC111016920 [Momordica charantia]) HSP 1 Score: 355.5 bits (911), Expect = 3.5e-94 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Moc08g12320.1 vs. NCBI nr
Match: KAA0063383.1 (uncharacterized protein E6C27_scaffold508G00110 [Cucumis melo var. makuwa] >TYK11645.1 uncharacterized protein E5676_scaffold828G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 354.0 bits (907), Expect = 1.0e-93 Identity = 180/194 (92.78%), Postives = 183/194 (94.33%), Query Frame = 0
BLAST of Moc08g12320.1 vs. NCBI nr
Match: XP_011651371.1 (uncharacterized protein LOC101218020 [Cucumis sativus] >XP_031739033.1 uncharacterized protein LOC101218020 [Cucumis sativus] >KGN57754.1 hypothetical protein Csa_011219 [Cucumis sativus]) HSP 1 Score: 331.6 bits (849), Expect = 5.4e-87 Identity = 168/177 (94.92%), Postives = 172/177 (97.18%), Query Frame = 0
BLAST of Moc08g12320.1 vs. NCBI nr
Match: XP_008461589.1 (PREDICTED: uncharacterized protein LOC103500158 [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 9.2e-87 Identity = 168/177 (94.92%), Postives = 171/177 (96.61%), Query Frame = 0
BLAST of Moc08g12320.1 vs. NCBI nr
Match: XP_038897455.1 (uncharacterized protein LOC120085511 [Benincasa hispida]) HSP 1 Score: 326.2 bits (835), Expect = 2.3e-85 Identity = 166/177 (93.79%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of Moc08g12320.1 vs. ExPASy TrEMBL
Match: A0A6J1D4M2 (uncharacterized protein LOC111016920 OS=Momordica charantia OX=3673 GN=LOC111016920 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 1.7e-94 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Moc08g12320.1 vs. ExPASy TrEMBL
Match: A0A5A7V5L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00090 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 4.9e-94 Identity = 180/194 (92.78%), Postives = 183/194 (94.33%), Query Frame = 0
BLAST of Moc08g12320.1 vs. ExPASy TrEMBL
Match: A0A0A0L9U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G280930 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.6e-87 Identity = 168/177 (94.92%), Postives = 172/177 (97.18%), Query Frame = 0
BLAST of Moc08g12320.1 vs. ExPASy TrEMBL
Match: A0A1S3CF27 (uncharacterized protein LOC103500158 OS=Cucumis melo OX=3656 GN=LOC103500158 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 4.4e-87 Identity = 168/177 (94.92%), Postives = 171/177 (96.61%), Query Frame = 0
BLAST of Moc08g12320.1 vs. ExPASy TrEMBL
Match: A0A6J1F3X6 (uncharacterized protein LOC111442160 OS=Cucurbita moschata OX=3662 GN=LOC111442160 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 3.1e-80 Identity = 156/177 (88.14%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of Moc08g12320.1 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 189.9 bits (481), Expect = 2.4e-48 Identity = 112/189 (59.26%), Postives = 137/189 (72.49%), Query Frame = 0
BLAST of Moc08g12320.1 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 167.9 bits (424), Expect = 9.6e-42 Identity = 103/184 (55.98%), Postives = 120/184 (65.22%), Query Frame = 0
BLAST of Moc08g12320.1 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34 Identity = 95/188 (50.53%), Postives = 115/188 (61.17%), Query Frame = 0
BLAST of Moc08g12320.1 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.9 bits (294), Expect = 1.1e-26 Identity = 81/184 (44.02%), Postives = 105/184 (57.07%), Query Frame = 0
BLAST of Moc08g12320.1 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.9 bits (294), Expect = 1.1e-26 Identity = 81/184 (44.02%), Postives = 105/184 (57.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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