Moc05g13670.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g13670.1
TypemRNA
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4219 domain-containing protein
Locationchr5: 10541652 .. 10548896 (+)
Sequence length906
RNA-Seq ExpressionMoc05g13670.1
SyntenyMoc05g13670.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAGTGAAGTGGAAGTGGAAAGCCTCGCATGGGATTTTGTTTTCCAAATTTTCAACAATGGAGTCTTCGTTCCTCGAATAAGGAGAATTGGCAGTACTGCTCAAACAATTGAAGTTCAAACTCAAACCAACAAGCCTAAAGAAGAAATAGAGGTACAAAAAGCTCCCACCTCTACTACGTCTATTGTTCTAATGGCGTTCACCTACTCAATATTTATTGTCGCTACCAGTTTGCGATGTGGAGCAGCCGACTTCCTTTCCAAGAGGAGAAAAATAGAGTCGCCACCTGTCTAAATTTATAGGGTGTGACTGGCCACCTATATGCAGGATAAGTTAGTCTGCACGAAAAAAATATGGGTTTGGGGGTCTATTGTGTATGGGGAAGATATTAGCACCCCACAACACTTTCAATGAACGATAATTTATTTTTCACATTATTTTCAAGAAATGACATTCAAAGAAAAGAATTTTATTTTTATTTTTAAATGTCCCACGTTTTATTGATCATTTTTTATAAGGTAAATAATGAACAATAATTATGAGTGGCCTAAAGTCAATAAGAAAATTTTGTTTATTTGAATTTAAATTGGTCTCCCAAAATAAATTCATCACCTCAAGAATATTAGGGAATCGACCTCTCAAATTCTCCAATCTCCATCATAGGAAATTTTTTAGGAAAATATTAAAATAAGATTTAGAAAAAGATTTTATTTTTGACTTTTAGAAATAGTGCTTTAAAAAATGTCAACTTTTTAGGAGGAGGTGCCTTTATAAAGATGTTTTTTTTTATCATTTAAATGTTTTTTTTAGCAAAATTTTCCTTATAAAAGAAGATTTCAAAAACGAAATGTATTTTTATTTTTTAAAGAAAAGATATTTATTTGCTTCAAAATATGATTTTTTCTTAGGAAATAGAAATGCAAACAATTTTGTATTAGTATTTCAATTACTTTTTAAAACCAAACAAATGATAAATGAGAAAACGACTAAAAATACATCATTCCATTAGGAAACATATTAAAAATAATCAAATCTTGGCATCCCGAAATATTGATCTTTACCCTCAAGAATCTAAGAGCATCAGCCTCCCGAACATTTCAAGGTTCCATCGTTGGGAGGTTTCCTTTTGTAAAATTTGAGTCGAAGATATTTAATAAATCAAGAAAAATAACATTTATTGTATAATATTACATAATATATACATTTTCCAAATATCTTACATATAATCTAAATGAACATGTTAGAAATATAATCAGTAAAATCTCATCTTACAAATAGTTCAAGCAACCATAATATGAAATTGGCAATGGGGAAAAGGAAAAAACAAGATGAAATAAAACAAGATAAGAAATATATCCCGAAAATAATGTCGAAATAATTAAACTTGTACTTGGAACATAGGTAGGTAAAAAAAAAAATATGATGAAGTACATCAACCTACTTTATTCGGCAAGAAAATGGAAACTTACCGTTTTACAAGCAAACTCCGATTCTTACCTTCTCCTTCAAATGCGACGCGAGTCAAACGATGAAGAAGAAAATTGTGGAGAAAATAGTGATAGAACTAAAATTGAGAGAAAGTGAATAAGGAGAGGGGTAAAAAATAAAACAAAAGTAGTAACAAAAAAAAAGGAAGATGATGAGAAAGTTATGGTGAGTGGAAGAGAGAAAATAAATAAATAAAAATAGAGAACGAGAGAGAGACCGTGTGGTGGAATATGAGAAACGAGTGAGGTGGGGTGAGGTAGGAGTTTGTGGGAGAATGATGAAATGATAATCGAGATAAAAGAAAAGGAAGAAAACTTTAGAAGAGAGCCAAGAATAAAAATCAAAACTAGTAGACCTTTTTGTGATGTGTTTCCTCCGTTTCCCTAAACCCAGCTACCTAGCTCATATTTATAGTGTTTCAAAACCCTAATTTACAAATTGAAAAAATATTTTCATTCATTACACAATGAATCAAATCTTATGATTTTTTTTACAAATTTTGATTTTTTCCCAAATTATGCTAAATCAAATTTAAAGTTTTTCCATATGAGTAAGATTTTGTTTTATTTTTATTGAAAAGATTTTATTTTGAGAAAATATAAAAATTCACATTTAATAAAAAAATATTTATGATTTTGTTACTTATTTTTATTTTATTAAAAATAATTTGATTTTGAAAAAAAAAAGATAATAAGGAAATCGATATTTAAACCAAAAACTTTTTACCTTTTTTATTTTTTTATTTTTTCATAAAACGAACCAAAAAAAAAAGAAGAAAATATTTCCCACAAAATATAGACAAAAATTATATTGGAAAATTACTATAAATTAAGTAAAAAAAAAGAATGATGAAATGGAATAGTGGACAAATTTAGGGGTCTACACTTATATATTTAGATATGATGGTTAAAAGTGAACAATTATAGGCAAATTAAACTACAATTAAAGTTTACTTTACTTATTCAAATAATTTCCATCAATCTTCATTAAAGAAAAAAAATCGTGTTTGGATATTTCTATCAACTTCGACATTTTCATAAGTTAAGATAGTCATATTATTACATTTAATAGTTAAAAGTGATCAATTATAGGTTAATTAAGATACAATTCAAGTTTTATTTACTAATTCAAAAAATTTCCATCAATTTCCACAATTTCCATGATTTTTCCCGAAATATCTGTCGACATTGACATGTTCATAAAATCGGGACCTCGATGTTTCCATCGACATGTTAAGAATTAGTGCAAACACATGTTAGTTTATGTTAGTGTTTCCACTTTGTAAGAGTTATGCTTGATGAATAATTTGTAGTTGTTATGAGTTAATTAAGTAGTGGGAAGAATGGATGGAAGTTGAGAGAGTTTGTAGCTTAGTGGCTTAATGAATTTATGATGTTGGTTTAGAGAGATTTTAAAGGGTAGTCGCCTAAGTAATGGGTTAGTGGCCTAAGTAGTGTGTTAGTAATCAGTTTTCTTATTTCTTATAAATTCGTATAACAATTCTCAATTCAATGAATAGAAATTCTTCATTCATACAGTTTCTCTCTTGCTTCCATTCTATTGTTCATCTTCGTTTTTGTTACATGGTATCAGAGCAACCAGGTTATTTTTCCTGTGCTTGAGTTTACTGCTCATTGTTTGAGTCTAGTGCTCGTTGATTGAGTTTAGTGCTCGGTGTTTGAGTTTAATACTTAGTGAAGATGAACGATTGAACCAATATTTATGTGTAGACAAGCTTACCAGTGACAACTATAGCTATTGGAGGTTATGTATGGAAGCTTTTCTACAAGGTCAAGATCTGTGGGATCTTGTTTCTGGTGATGATACGGAAATTCCAGAAGATACTCAGGAGAATGCTGAGGCGCGAAGGAATGGAAGATCAAGTGTGGCAAAGCATTATTTGCTTTGCGAAATTATATTGGCAAGGAGTATATCGAGCATGTTCGTCACGAGAAGTCTCCAAAACAAGTGTGGGATACACTTGAAAGGTTGTTTACTCAAAAGAACACGACGATATTGCAGTATTTTTGGATAACGAACTTTTTGGAACAACTCAAGATAATTTGTCGGTTTCAGAGTACTTTCTGAAAATTAAATCTTTGTGTTATGAAATTTCAGAATTGGATGAGGAGGAGCCCATTAGTGATGCTCGTTTGCGTCGTTATCTCATTCGTGGACTGCAAAAAGAATTTATGCCATTTATTTTTTTGATACAAGGTTGGTAAATCAACCTTCTATCATTGAGTTAGAAAATTTGCTACCAGATCAAGAAGCCTTGGTGAAACAAATGCTTGGCGACAACAAGCGGTCTTCTCCCGAGGTAGAAGGTATTTTTTATACAAGAGACAAAGTAGAAAGAAATTATGTTTCTGAATGTTCTTCAGATGGTAGCAAGTATTCTAGAAATAAAAGGTAGTCCAAAGGTAATTCAAAAGGATGTTTTAGGTGTGGAAAGCTGGGACATATCAAATGTGATTGTCTGGTAAAGGTGGTATGCAGTCGATATGGGAAACCATGCCATATTAAATAAAATTGTCGAGTGAAACTTAAAGAAGCAGAAGCATATGTTGTACAGGAAATTAAAAAAGCCTGAACAACTCAATTGGGAACATTGTTTATCAAATGAAAGTTATTGATCAACTCATTAATTGTTGTACTAATGATTCTTTTGATTATAGTGAGGATTGGTCTGATGGTTCTGGTTGTTTTCATCATACTACTGAAGATGTATCTCTTCTTTATAATATTTGTGGAAGAAGAGTCAATGTAGCGGCTGATAATTCCTTACATCTAGATGTGGAAGAAGGACACGTCAATATTGAAAGTTATGAATTGGGCAATGTTTCTCGTAGAAGTGGTTCCTACGGTCCAAATTTGAAGGAGAATTTTGCTTCAGTCTCTCAGGTTGCTGATGCTGAGAGTGATTCTGGAAACAAGTTGAATTGTGGTAGAAATTCTGCTCATTCTTGTGCTAAAGATGGTACAAGCTTAAGTTGTTTAAATAATCCGAAGGTTAGCCTTATAGCTGGACTTATTACTGGGTTAACATTTGTACTTTTAGTCTGATTATTTTTCTGCAACGATAACTTTGTAGATGTTGCAGGTGAAGTTGATTGAAAAGTTTCTTTCAATAAGTTGAAAGGATTTGCATGGAAAGCGAACTTTAAAGGAGACGCTTTCCAATATGAGGATTTGAGTGTTGTCTACCGTCCTCGAGAACTTAAGCTCGGGAAACTTGCTTTGGATTGACCTACTCGAGGGTGTGTGTTATTGGACACAACTCAAGGTTTCAAGTATTTTTGTGAAAGTTGCAATCCAAAGATTATTTATCAAGGTGTTGTGGTTGCTAATGTATTTCTTGAGGAAGATTTTGAAGTTGTTGCTGGTGTTTTTGGCTTAGCAAAGCTGGTTGGTGTTAGAATGACTAATGTCACTCGAGCTTGGGAAATAATAAGTCATATTGAATTGAAGTATTTATTTACTGGAAAATCTTCAGGAATGATGAATATTTTTTGTTATGACATGATTTTTTTGGACCTTGTTACATGTTAGATTGATTTCTTGTACTTTGAGGAAGAAAATGATGTTTTACTCATCAGCTATGTCAAGAAATTGAAAAGGGAAAGCAACTCAATGCGACTGTGGATTGTTTTCGTATGGTGGACACAAAAGTGATTACTATTCCTATAGAGTAACATTAAAGTAATCAGAAGTGCACAATGTTGGTTGCATGTATCTGTATGTTTGCACTAAGGGGAGCGTTAAGAATTAGTGCAAACACGTGTTAGTTTATGTTAGTGTTTCCACTTTTTAAGAGTTATTCTTGATGGTTAATTTGTAGTTGTTATGAGTTAATTAAGTAGTGGGAAGAGTGGATGGAAGTTGAGAGAGTTTGTAGCTTAGTGGCTTAATGGAGTTATGGTGTTGGTTTAGAGATTTTAAAGGGTAGTTGCCTAAGTAGTGGGTTAGTGGCCTAAGTAGTGTGTTAGTGATCAGTTTTCTTATTTCTCTATAAATTCTTGTAACAATTCTCAATTTAATTAATAGAAGTTCTTCATTCGTACAGTTTCTCTCTTGCTTCCATTCTATTGTTCATATTCGTTTTCATTACAGACATCGACATTTCGAACATTGCTTGCGTGCCTCAAATTAAAATTGATTTTATTATTTTTTATCATTATTTTTACTAAATAATTATTTCGAAAACCCCAATGACGGACATTGGAAACTTCCAATATTCCCGAGGTAATAAAATTTTTCTAATGACCTTCGCGCCACTCATAATTATTAGTTCATATTTTATAGTAAATATGAAGTAATAAAGTATGAGACATTTAAATAAAACAAAAACATATTTTTCTTTGGACCAAATAATAGGAAAATCAATGATGAAATATGGTACCGTTTTCGAACCAGTGTTGTAGGGTGCTAACCCCTTCCCTATGCTCAATCGACTCTCGAACAAAAAATTTGTTTTTGCAGACCGTTTTTTTTTTAAATAGGTGACCAATCACACCTTAGAGATGGTTGGTGGCAACTCCAAATCCTTATCTCGAAAGAGACCCTTCAGGGGATGACGTCGGCTGCTCCGTGTCACGATGACGTTGTGACAACGGGAATTGGAACCTTTCAATATTCTTAAGGTGATAAAATTTTCTAACGGCTTTCGGGCCACTAATAATTATTAGTTCATATTTTATAATAAAGTATGAATGAATAAAATATGGACATTTAAATAAAAACACAAACATATTTTTCTTTTTGACCAATAAAATATAATAGGATAATTTTTGACAAAATTTTGTAACCGTTTTCGAACGGGTGTCGTAGGGTGCTAACACCTTCTCTACACTCAATCGACTCCCAAACCAAAAATTTGTTTTCGCAGGCCAAGTTTTTTTTTTTTTTTAAAAAAATAGGTGATCAATCACATATCGTGGATGATTGATGGCGACTCCAAACCCTTATCTCAAAAGAGACCCTTCAGGAGATGATGTCGGCTACTCCACGTTGCGATGACGTTTTCAAACGGGTGTCGTAGGGTGCTAACACCTTCCCTACACTCAATCGACTCCCGAACCAAAAATCTGTTTTCGCAGACCGAGTTTTTTTTAATAGGTGATCAATTGCATCTCGTGAATGATTGATGGCGACTCCAAACCCTTATCCGAGAGAGACCCTTCAGGAGATGACATCAGCTACTCCACGTTGCGATGACGTTGCGACATGACCGAACCATGAATTTGAGCTCTATTTGAGTCATGACCCAATTTGATATCAAAAGGTTTGGGCTTGGGTGATTTTGAACCCAGCCCTGAACTTGGGCTTGAGTGATTTTCGACTTAGCCAATTATGTAAGTAGATTTAGACTTTCTCAAATTTAAGAGGAATAAGTACACAACTAGCCTATTTGGAAATTAAAATTACAAAATTTGCTTAACTATTAAGAATTTACAATATTGTCCAAAGATTGGCCATAAGAAAATTACCAATTAGTCATTTGTAATATTATATTTAATTAAAAAAATAAACACAAAATCATAAAATCGAATCCCTAAAACTATGGAGCCCAAATTTCTCATTTATTTGAAAACCCCAAACCCCTAAAATCACTCACTCGACATCAATTTTTTTTATTGCTTGGCATTTTCCTGTGGAAGACCACCAACACAAGTGGCTGCTGCTATTGACTGATTGCTTGGCATTTTGCGGCAGAGGACTACGTCAATTCCATCAGCTGCTGCTATTGACTGA

mRNA sequence

ATGATGAGTGAAGTGGAAGTGGAAAGCCTCGCATGGGATTTTGTTTTCCAAATTTTCAACAATGGAGTCTTCGTTCCTCGAATAAGGAGAATTGGCAGTACTGCTCAAACAATTGAAGTTCAAACTCAAACCAACAAGCCTAAAGAAGAAATAGAGTGCTCGTTGATTGAGTTTAGTGCTCGGTGTTTGAGTTTAATACTTAGTGAAGATGAACGATTGAACCAATATTTATGTGTAGACAAGCTTACCAGTGACAACTATAGCTATTGGAGGTTATGTATGGAAGCTTTTCTACAAGGTCAAGATCTGTGGGATCTTGTTTCTGGTGATGATACGGAAATTCCAGAAGATACTCAGGAGAATGCTGAGGCGCGAAGGAATGGAAGATCAAGTATGGTAGCAAGTATTCTAGAAATAAAAGGTAGTCCAAAGGTAATTCAAAAGGATGTTTTAGGTGTGGAAAGCTGGGACATATCAAATGTGATTGTCTGTGAGGATTGGTCTGATGGTTCTGGTTGTTTTCATCATACTACTGAAGATGTATCTCTTCTTTATAATATTTGTGGAAGAAGAGTCAATGTAGCGGCTGATAATTCCTTACATCTAGATGTGGAAGAAGGACACGTCAATATTGAAAGTTATGAATTGGGCAATGTTTCTCGTAGAAGTGGTTCCTACGGTCCAAATTTGAAGGAGAATTTTGCTTCAGTCTCTCAGGTTGCTGATGCTGAGAGTGATTCTGGAAACAAGTTGAATTGTGGTAGAAATTCTGCTCATTCTTGTGCTAAAGATGGTGTTGTGGTTGCTAATGTATTTCTTGAGGAAGATTTTGAAGTTGTTGCTGGTGTTTTTGGCTTAGCAAAGCTGAGGACTACGTCAATTCCATCAGCTGCTGCTATTGACTGA

Coding sequence (CDS)

ATGATGAGTGAAGTGGAAGTGGAAAGCCTCGCATGGGATTTTGTTTTCCAAATTTTCAACAATGGAGTCTTCGTTCCTCGAATAAGGAGAATTGGCAGTACTGCTCAAACAATTGAAGTTCAAACTCAAACCAACAAGCCTAAAGAAGAAATAGAGTGCTCGTTGATTGAGTTTAGTGCTCGGTGTTTGAGTTTAATACTTAGTGAAGATGAACGATTGAACCAATATTTATGTGTAGACAAGCTTACCAGTGACAACTATAGCTATTGGAGGTTATGTATGGAAGCTTTTCTACAAGGTCAAGATCTGTGGGATCTTGTTTCTGGTGATGATACGGAAATTCCAGAAGATACTCAGGAGAATGCTGAGGCGCGAAGGAATGGAAGATCAAGTATGGTAGCAAGTATTCTAGAAATAAAAGGTAGTCCAAAGGTAATTCAAAAGGATGTTTTAGGTGTGGAAAGCTGGGACATATCAAATGTGATTGTCTGTGAGGATTGGTCTGATGGTTCTGGTTGTTTTCATCATACTACTGAAGATGTATCTCTTCTTTATAATATTTGTGGAAGAAGAGTCAATGTAGCGGCTGATAATTCCTTACATCTAGATGTGGAAGAAGGACACGTCAATATTGAAAGTTATGAATTGGGCAATGTTTCTCGTAGAAGTGGTTCCTACGGTCCAAATTTGAAGGAGAATTTTGCTTCAGTCTCTCAGGTTGCTGATGCTGAGAGTGATTCTGGAAACAAGTTGAATTGTGGTAGAAATTCTGCTCATTCTTGTGCTAAAGATGGTGTTGTGGTTGCTAATGTATTTCTTGAGGAAGATTTTGAAGTTGTTGCTGGTGTTTTTGGCTTAGCAAAGCTGAGGACTACGTCAATTCCATCAGCTGCTGCTATTGACTGA

Protein sequence

MMSEVEVESLAWDFVFQIFNNGVFVPRIRRIGSTAQTIEVQTQTNKPKEEIECSLIEFSARCLSLILSEDERLNQYLCVDKLTSDNYSYWRLCMEAFLQGQDLWDLVSGDDTEIPEDTQENAEARRNGRSSMVASILEIKGSPKVIQKDVLGVESWDISNVIVCEDWSDGSGCFHHTTEDVSLLYNICGRRVNVAADNSLHLDVEEGHVNIESYELGNVSRRSGSYGPNLKENFASVSQVADAESDSGNKLNCGRNSAHSCAKDGVVVANVFLEEDFEVVAGVFGLAKLRTTSIPSAAAID
Homology
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BLAST of Moc05g13670.1 vs. NCBI nr
Match: KAA8515544.1 (hypothetical protein F0562_018845 [Nyssa sinensis])

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-26
Identity = 82/222 (36.94%), Postives = 112/222 (50.45%), Query Frame = 0 

Query: 79  VDKLTSDNYSYWRLCMEAFLQGQDLWDLVSGDDTEIPEDTQENAEARRNGR--------- 138
           VDKL  +NYSYW+LCMEA+LQGQDLWDL+S DD  IPEDT +NAE R+  +         
Sbjct: 9   VDKLVGNNYSYWKLCMEAYLQGQDLWDLISSDDVVIPEDTPQNAELRKKWKIKCGKALFA 68

Query: 139 ----------SSMVASILEIKGSPKVIQKDVLG--------------------------- 198
                       +  S  ++KGSP+ IQ+  +G                           
Sbjct: 69  LRTSIKLDMEEPVTTSNPKLKGSPEAIQEAAIGANVAHETSEFEQLKWEQCLFIEAVDQP 128

Query: 199 -----------VESWDISNVIVCEDWSDGSGCFHHTTEDVSLLYNI---CGRRVNVAADN 239
                      VE++  +++   +DW   SGC HH T + SLL  +    G+R  V ADN
Sbjct: 129 VILNSVIQQTNVETYANASIDYNKDWIIDSGCSHHATGNASLLSEVRPHYGKRAIVTADN 188

[Close]
BLAST of Moc05g13670.1 vs. NCBI nr
Match: KAA8538375.1 (hypothetical protein F0562_028079 [Nyssa sinensis])

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-24
Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 0 

Query: 79  VDKLTSDNYSYWRLCMEAFLQGQDLWDLVSGDDTEIPEDTQENAEARRNGRSSMVASILE 138
           VDKL  +NYSYW+LC+EA+LQGQDLWDL+SGDD  IPEDT +NAE RR  +     ++  
Sbjct: 79  VDKLVGNNYSYWKLCIEAYLQGQDLWDLISGDDVVIPEDTPQNAELRRKWKIKCGKALFA 138

Query: 139 IKGSPKVIQKDVLGVESWDISNVIVCEDWSDGSGCFHHTTEDVSLLYN---ICGRRVNVA 198
           ++ S  + Q+ +  V    + N            C HH T + SLL       G+R  V 
Sbjct: 139 LRTS--ISQEYIQHVRDGKLPN------------CSHHATGNASLLSEDRPYYGKRAIVT 198

Query: 199 ADNSLHLDVEEGHVNIES--YELGNVSRRSGSYGPNLKENFASVSQVADA 244
           ADNSLH  V+E + N++      G VS +   + P LK+N ASVSQ+AD+
Sbjct: 199 ADNSLHPVVKERNFNVKKDISNAGGVSLKDVYHVPGLKKNLASVSQIADS 234

[Close]
BLAST of Moc05g13670.1 vs. NCBI nr
Match: KAA8537014.1 (hypothetical protein F0562_029492 [Nyssa sinensis])

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-15
Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 0 

Query: 102 DLWDLVSGDDTEIPEDTQENAEARRNGRSSMVASILEIKG--SPKVIQKDVLGVESWDI- 161
           DLWDL+ GDD  IPEDT  NAE R+  +     ++  ++   S + I+  V  V+S  I 
Sbjct: 10  DLWDLIFGDDAVIPEDTPHNAELRKKWKIKCGKALFALRTLISQEYIE-HVRDVKSPKIG 69

Query: 162 -SNVIVCEDWSDGSGCFHHTTEDVSLLYNI---CGRRVNVAADNSLHLDVEEGHVNIES- 221
                  +DW   SGC HH T +VSLL+ +    G+R  V  DNSLH  V+EG+ N+++ 
Sbjct: 70  YGGAYYSKDWIVDSGCSHHATRNVSLLFEVRPHYGKRAIVTTDNSLHPVVKEGNFNVKND 129

Query: 222 -YELGNVSRRSGSYGPNLKENFASVSQVAD 243
               G VS +   + P LK+N ASVSQ+AD
Sbjct: 130 ISNAGGVSLKDVYHVPGLKKNLASVSQIAD 158

[Close]
BLAST of Moc05g13670.1 vs. NCBI nr
Match: KAA8549541.1 (hypothetical protein F0562_001441 [Nyssa sinensis])

HSP 1 Score: 86.3 bits (212), Expect = 5.0e-13
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0 

Query: 79  VDKLTSDNYSYWRLCMEAFLQGQDLWDLVSGDDTEIPEDTQENAEARRNGRSSMVASILE 138
           VDKL  +NYSYW+LCMEA+LQGQDLWDL+SGDD  IPEDT +NAE RR  +     ++  
Sbjct: 9   VDKLVGNNYSYWKLCMEAYLQGQDLWDLISGDDVVIPEDTPKNAELRRKWKIKCGKALFA 68

Query: 139 IKGS 143
           ++ S
Sbjct: 69  LRTS 72

[Close]
BLAST of Moc05g13670.1 vs. NCBI nr
Match: KAA8540328.1 (hypothetical protein F0562_024753 [Nyssa sinensis])

HSP 1 Score: 86.3 bits (212), Expect = 5.0e-13
Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 0 

Query: 79  VDKLTSDNYSYWRLCMEAFLQGQDLWDLVSGDDTEIPEDTQENAEARRNGRSSMVASILE 138
           +DKL  +NYSYW+LCMEA+LQGQDLWDL+SGDD  IPEDT +NAE RR  +     ++  
Sbjct: 9   IDKLVGNNYSYWKLCMEAYLQGQDLWDLISGDDVVIPEDTPQNAELRRKWKIKCGKALFA 68

Query: 139 IKGS 143
           ++ S
Sbjct: 69  LRTS 72

[Close]
BLAST of Moc05g13670.1 vs. ExPASy TrEMBL
Match: A0A5J4ZCP7 (DUF4219 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_018845 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.6e-27
Identity = 82/222 (36.94%), Postives = 112/222 (50.45%), Query Frame = 0 

Query: 79  VDKLTSDNYSYWRLCMEAFLQGQDLWDLVSGDDTEIPEDTQENAEARRNGR--------- 138
           VDKL  +NYSYW+LCMEA+LQGQDLWDL+S DD  IPEDT +NAE R+  +         
Sbjct: 9   VDKLVGNNYSYWKLCMEAYLQGQDLWDLISSDDVVIPEDTPQNAELRKKWKIKCGKALFA 68

Query: 139 ----------SSMVASILEIKGSPKVIQKDVLG--------------------------- 198
                       +  S  ++KGSP+ IQ+  +G                           
Sbjct: 69  LRTSIKLDMEEPVTTSNPKLKGSPEAIQEAAIGANVAHETSEFEQLKWEQCLFIEAVDQP 128

Query: 199 -----------VESWDISNVIVCEDWSDGSGCFHHTTEDVSLLYNI---CGRRVNVAADN 239
                      VE++  +++   +DW   SGC HH T + SLL  +    G+R  V ADN
Sbjct: 129 VILNSVIQQTNVETYANASIDYNKDWIIDSGCSHHATGNASLLSEVRPHYGKRAIVTADN 188

[Close]
BLAST of Moc05g13670.1 vs. ExPASy TrEMBL
Match: A0A5J5B552 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_028079 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.0e-25
Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 0 

Query: 79  VDKLTSDNYSYWRLCMEAFLQGQDLWDLVSGDDTEIPEDTQENAEARRNGRSSMVASILE 138
           VDKL  +NYSYW+LC+EA+LQGQDLWDL+SGDD  IPEDT +NAE RR  +     ++  
Sbjct: 79  VDKLVGNNYSYWKLCIEAYLQGQDLWDLISGDDVVIPEDTPQNAELRRKWKIKCGKALFA 138

Query: 139 IKGSPKVIQKDVLGVESWDISNVIVCEDWSDGSGCFHHTTEDVSLLYN---ICGRRVNVA 198
           ++ S  + Q+ +  V    + N            C HH T + SLL       G+R  V 
Sbjct: 139 LRTS--ISQEYIQHVRDGKLPN------------CSHHATGNASLLSEDRPYYGKRAIVT 198

Query: 199 ADNSLHLDVEEGHVNIES--YELGNVSRRSGSYGPNLKENFASVSQVADA 244
           ADNSLH  V+E + N++      G VS +   + P LK+N ASVSQ+AD+
Sbjct: 199 ADNSLHPVVKERNFNVKKDISNAGGVSLKDVYHVPGLKKNLASVSQIADS 234

[Close]
BLAST of Moc05g13670.1 vs. ExPASy TrEMBL
Match: A0A5J5B3A5 (Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_029492 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.9e-16
Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 0 

Query: 102 DLWDLVSGDDTEIPEDTQENAEARRNGRSSMVASILEIKG--SPKVIQKDVLGVESWDI- 161
           DLWDL+ GDD  IPEDT  NAE R+  +     ++  ++   S + I+  V  V+S  I 
Sbjct: 10  DLWDLIFGDDAVIPEDTPHNAELRKKWKIKCGKALFALRTLISQEYIE-HVRDVKSPKIG 69

Query: 162 -SNVIVCEDWSDGSGCFHHTTEDVSLLYNI---CGRRVNVAADNSLHLDVEEGHVNIES- 221
                  +DW   SGC HH T +VSLL+ +    G+R  V  DNSLH  V+EG+ N+++ 
Sbjct: 70  YGGAYYSKDWIVDSGCSHHATRNVSLLFEVRPHYGKRAIVTTDNSLHPVVKEGNFNVKND 129

Query: 222 -YELGNVSRRSGSYGPNLKENFASVSQVAD 243
               G VS +   + P LK+N ASVSQ+AD
Sbjct: 130 ISNAGGVSLKDVYHVPGLKKNLASVSQIAD 158

[Close]
BLAST of Moc05g13670.1 vs. ExPASy TrEMBL
Match: A0A5J5BCB3 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_024753 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-13
Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 0 

Query: 79  VDKLTSDNYSYWRLCMEAFLQGQDLWDLVSGDDTEIPEDTQENAEARRNGRSSMVASILE 138
           +DKL  +NYSYW+LCMEA+LQGQDLWDL+SGDD  IPEDT +NAE RR  +     ++  
Sbjct: 9   IDKLVGNNYSYWKLCMEAYLQGQDLWDLISGDDVVIPEDTPQNAELRRKWKIKCGKALFA 68

Query: 139 IKGS 143
           ++ S
Sbjct: 69  LRTS 72

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BLAST of Moc05g13670.1 vs. ExPASy TrEMBL
Match: A0A5J5C7C2 (DUF4219 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001441 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-13
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0 

Query: 79  VDKLTSDNYSYWRLCMEAFLQGQDLWDLVSGDDTEIPEDTQENAEARRNGRSSMVASILE 138
           VDKL  +NYSYW+LCMEA+LQGQDLWDL+SGDD  IPEDT +NAE RR  +     ++  
Sbjct: 9   VDKLVGNNYSYWKLCMEAYLQGQDLWDLISGDDVVIPEDTPKNAELRRKWKIKCGKALFA 68

Query: 139 IKGS 143
           ++ S
Sbjct: 69  LRTS 72

The following BLAST results are available for this feature:
BLAST of Moc05g13670.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA8515544.11.4e-2636.94hypothetical protein F0562_018845 [Nyssa sinensis][more]
KAA8538375.11.7e-2442.94hypothetical protein F0562_028079 [Nyssa sinensis][more]
KAA8537014.11.8e-1540.67hypothetical protein F0562_029492 [Nyssa sinensis][more]
KAA8549541.15.0e-1359.38hypothetical protein F0562_001441 [Nyssa sinensis][more]
KAA8540328.15.0e-1357.81hypothetical protein F0562_024753 [Nyssa sinensis][more]
BLAST of Moc05g13670.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc05g13670.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5J4ZCP76.6e-2736.94DUF4219 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_018845 PE... [more]
A0A5J5B5528.0e-2542.94Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_028079 PE=4 SV=1[more]
A0A5J5B3A58.9e-1640.67Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F05... [more]
A0A5J5BCB32.4e-1357.81Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_024753 PE=4 SV=1[more]
A0A5J5C7C22.4e-1359.38DUF4219 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001441 PE... [more]
BLAST of Moc05g13670.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025314Domain of unknown function DUF4219PFAMPF13961DUF4219coord: 82..107
e-value: 1.2E-9
score: 37.7

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Moc05g13670Moc05g13670gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Moc05g13670.1.exon1Moc05g13670.1.exon1exon
Moc05g13670.1.exon2Moc05g13670.1.exon2exon
Moc05g13670.1.exon3Moc05g13670.1.exon3exon
Moc05g13670.1.exon4Moc05g13670.1.exon4exon
Moc05g13670.1.exon5Moc05g13670.1.exon5exon
Moc05g13670.1.exon6Moc05g13670.1.exon6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Moc05g13670.1cds.Moc05g13670.1CDS
cds.Moc05g13670.1cds.Moc05g13670.1_2CDS
cds.Moc05g13670.1cds.Moc05g13670.1_3CDS
cds.Moc05g13670.1cds.Moc05g13670.1_4CDS
cds.Moc05g13670.1cds.Moc05g13670.1_5CDS
cds.Moc05g13670.1cds.Moc05g13670.1_6CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Moc05g13670.1Moc05g13670.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
molecular_function GO:0004180 carboxypeptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding