Moc05g11400.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g11400.1
TypemRNA
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr5: 8887563 .. 8891724 (-)
Sequence length420
RNA-Seq ExpressionMoc05g11400.1
SyntenyMoc05g11400.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGTATTGCTGCCGACATGCCCCATCTTCAGATCGACCTCAGTGAACTGAAGAAGAAGTACGCTGAAAAATGGGCCTCTGGGCCTAATAGCACTCCGGGCCCCCAGTCTTTGGTGGAAAAGTACGTTAGAGAGCTGGACTCTGACTACTCCGATCTCGAGGAAAAAGATGTTCCTAGTCAAGAGCAGGTTGAGGTCGGCACTACCCAGGAGGAGGTCCCATCACAGCAGGGCAGGTCCCAGGAGGTCAACTTTCTGGGTTCCCAGGGTGAGTTGCCCTCTCACCTCAGGAGTAGCTGACGCTTTTGAGCCTTCATGCTGTTTGTGTTTGTTGTTTTTTTTTTTCTTTTTGAATTTTGTGTAAGTCTTTGGGTAGAGTTGCAAGGTATACAAGCCTTGGCTCTGTCCTTTAATCAATGGAATCTTCATTTCTCCACTTCTGCACATCGAGCTCCGCCTGTTCTTTTATTGCTTTTTCTTTAAGTTTTTGAACTTGCTTTTGTAAATTTGAACTTGTATATGAATAATTTCATCTCGCACCTCTAGCTCGTAAGCTTAAAGGATTGAATTTGGGAGGAACTCTATCCACATCGCCTCTTTTACTTACGCTTGTTTTTAAGGCTTGAATTTGAGAGTTTTCTTCACTGGTATTTGATATTCTCCTCAAACTCGGAAGTCCAAAAGCATATTAAACAATTTGAACTTTCTACATCGCACCTTTAACTTAAACATTCAAATGGTTGAATTTTGAGTCCATAATTAATATTCACATCGCACCTCGAACCCGTGGGTTTGGAGGATTGAATTTCTTGAACCTTCCACATCGCACCTTTAACTTAAGCGTTCAAATGATTGAATTTTGGTTCATAATTGATTTTGACATCGCACCTCGAACCCGTGGGTTTTGAGGTTTGAATTTAATCAATTTTTACATTTACCTTGCCAGTTTTAAGTCTTATGGGAGTCCGTGGCCGCCATTTAATTTCTGATCAAACTCAGAGTCATGAAATTAAATAACTCTATTTATTAAAAGTTCCTCCCCTTGAAAATTTTTACAAGTCCATTTTAGGACCATTTTGACATTTCAAGGGTAATAGCGCTTTAGGTGCTCTGCGTTCCACGGATGCGCAAGCATGTTTCCTTCCAGGTCGGCCAGCATGTACGTTCCAAGTCAGACTATGCCTTTGACTTCGAATGGCCTCTCCCAACTTGGGTCAAGGGTGCCCACATGACTCTGAATCTTCCTGAGGACCAAATGTCCAACTTGAAAGCTTCGAGGTCGAACTCGGGCATTGTAATGTCTGACCATTCTGTTTTGATACTCTGCTAATTGTAGCTGGGCCATTTCCCTTTTTTCCTCTAGTAGGTCGAGGTTGAGGAGCAGTTCGGCCTCGTTTCTGAGCGGTTTGTACTGCTCTATCCTGTCGGTCAGCATGCCGATCTCAACCGAAACGACAGCTTCAGAGCCAAAGGCCAGTGAGAATGGGGTTTCGCCAGTTGACTCTCTTGGGGTAGTCCGATATGACCATAATACTTCGGGTAGCTCCTCGGCCCATCTCCCCTATCTAGAGTCCAATCTCAGCTTGAGCCCTCGTTTTATAATTTTATTTATTGCTTCAACCTGCCCATTTGCCTTCGGATGCGCAGGGGACGAACTGAGATGGCTTATGCCCAGCTTCCTGCAAAAGTCATTGAACTTTGCATTGTCGAACTGCTTTCCATTGTCCATCACAATAGCGTTTGGTATACCGAAACGACATACAATGTTTGTCCATATGAAAGATGTGACTCTGGACTTCGTGATGTGAAAGAGCGCCTCGGCCTCGGCCCACTTGGTGAAGTAATCCACAGCGACGACGGCGAACTTGGTTTGCCCTTTGCTCAGAGGGAATGGACCTATGATGTCAACCCCCCATTGTGCGAATCGCTATGGGGCCGAGATGGGGGTGAGCAGCTCGGGAGGCTGATGGATAATATTTGCAAAGCTCTGGCAGTTGTCGCAAGTTTTCACAAACTACTTCGCATCCTGCTCGACAGTGGGCCAATAGTACCCTTGTCGAACCACCTTGGCCGATAACGACCTGGCACTAGAGTGGTTTCCATACACTCCTTCGTGGATTTCCCTAAGGATGTAAATGCCTTTTTTGGGAGTTACACACTTAAGCAGAGGCAGGGAGAAGCCACATCGGTACAATGCTCCATCTCGGAGTATGAACCGAGCTGCTTTTCGCGCCATTTTCTTATGCTCCTTTGAATCTTGCAGTGGATTCCCTTTGATGAACTCCACGATTGGATCCATCCACGAGGGTGCTGGAGTATCAAGCTCCATCAAATCTGGCTCCAAGATTGAAGGATTGTCTAGGATCTCGACCGGGACCGACCTGGCCAGATCGGTCTCATATGTTGGTGCCAATTTGGCTAAGGCATCTGCGTTGGAATTTTCTGATCTTGGAACTTGATTCACCTCGTAAGTCTTGAACTGGGCGAGGTGCGATCTGACTTTGCTTAGAAATTTTTCCATCCAGGAGTCTTTTGTTTGATACTCCTCCTTCATCTAATTTATGATCAGCTGGGAGTGACTGAACACCTTGATATGGATGGCCCCAGTCCTTTGGCAACGCGCAGCCCTGCCAGAAGCGCTTCGTATTCGCCCCATTATTTGAAGTCCGAAAATTGAACCGCAGGGCATACTCAAACCGCATGCCACCTGGTGCGAGCAAGAGGATTCCTGCTTCGCACCCTCTCTCATTGTAAGATCTGTCAATGTAGATCGTCCACGGGAGGTCGGACTCGGCCGATTGAGGCGGTGGGGTGAGCTCCGCGATAAAATCTGTCACTGCTTGCCCTTTCAAAGCAGTTCTGAGTTCGAACTGGATGTCGTATTCGCTCAACTCCATTGCCCATTTCATCAGGCGCCCTCATGTTTCTGGCCTGTGAAAGATATTCTTCAGGGGTAAGTTGGTAAGTACTACGACGGTATGCACTTGGAAGTACGGCCTAAGTCTTCGGGTCGAGGTAACTAAGGTGAGGGCCAGCTTTTCCATTTAAGGGTATCTGGTCTCGGCCTCGGTCATGGCTTTACTTGTGTAATAAATGGGACTTTGGCGTACTCCCTCCTGCTTGATTAGGCCGAGCTAACAGCACTGTCGGACACTTCCAGGTACAAGTGGAGCTTGTCTCCTAGTAATGGCATGGCGAGTAGAGGTGCCGAGCAGAGATAGTTTTTCAATTGTTCCAGTGCTTGCTCGCACTCTGCCGTCCATTCAAATGGTCCATTCTTTCTTAGGACTTTGAAGAAAGGAAGGCACTTATCTATTGACCTCGAAACGAATCTATTCAGAGCTGCAATCCTTCCATTGAGGCATTGAAGCTGCTTTAGTGTTTGGGGTGCTTCCATCTCGAGCACGGCTTTTATCTTCTTTGGGTTAGCTTCGATCCCATGGTTATTTACCATGAAGCCCAGAAACTTATCCGAGGAGACTCCAAAGGCACACTTCGCTGGATTAAACTTCATTTGATACTTTCGCAGTACTTCGAAGGCTTCGGTCAGGTCGGAAAGATGCGACTTTGACTGCTTGCTTTTGACAAGCATGTCGTCCACATACACTTCCATGTTTCGACTGATCTGCTTGGTGAACATCTTGTTCACCATTCTTTGATATGTCGCACCTGGGTTTTTTAGCCCGAAGGGCATAACCTTATAGCAATACAAACCTTGGTCTGTTATGAACGCGGTATGAGCTTGATCTGGCACATGCATTTTAATTTGGTTCTATCCGAAGTAGGCATCCATGAAGGAGAGCAACTCATGCCCGGCTGTTGCATCTACGAGCTGGTCGATCCTTGGTAGTGAGAAACAGTCTTTTGGGCATGCCTTATTTAAATTTGTAAAATCTACGCACATTCTCCACTTCCCGTTAGCTTTTTTAACTAATACAACATTAGAGAGCCACTTGGGATACATAATTTCTTTTATATATTCAGCTTTCAAAAGTTTGTTTACTTCCTCAACAATTACATCACTCCTTTCCATATTTACATGTCTTCTCTTTTGCTTTACAGGTCAGAATGATGGATCTATGTTGAGGCGATGAATCATGATCCTTAGGTCTATGCCAGGCATGTCCTCATGGAACCATGCAAAAACATCCGAGTTTGA

mRNA sequence

ATGAAGGGTATTGCTGCCGACATGCCCCATCTTCAGATCGACCTCAGTGAACTGAAGAAGAAGTACGCTGAAAAATGGGCCTCTGGGCCTAATAGCACTCCGGGCCCCCAGTCTTTGGTGGAAAAGTACGTTAGAGAGCTGGACTCTGACTACTCCGATCTCGAGGAAAAAGATGTTCCTAGTCAAGAGCAGGTTGAGGTCGGCACTACCCAGGAGGAGGTCCCATCACAGCAGGGCAGTGGATTCCCTTTGATGAACTCCACGATTGGATCCATCCACGAGGGTGCTGGAGTATCAAGCTCCATCAAATCTGGCTCCAAGATTGAAGGATTGTCTAGGATCTCGACCGGGACCGACCTGGCCAGATCGGTCTATGCCAGGCATGTCCTCATGGAACCATGCAAAAACATCCGAGTTTGA

Coding sequence (CDS)

ATGAAGGGTATTGCTGCCGACATGCCCCATCTTCAGATCGACCTCAGTGAACTGAAGAAGAAGTACGCTGAAAAATGGGCCTCTGGGCCTAATAGCACTCCGGGCCCCCAGTCTTTGGTGGAAAAGTACGTTAGAGAGCTGGACTCTGACTACTCCGATCTCGAGGAAAAAGATGTTCCTAGTCAAGAGCAGGTTGAGGTCGGCACTACCCAGGAGGAGGTCCCATCACAGCAGGGCAGTGGATTCCCTTTGATGAACTCCACGATTGGATCCATCCACGAGGGTGCTGGAGTATCAAGCTCCATCAAATCTGGCTCCAAGATTGAAGGATTGTCTAGGATCTCGACCGGGACCGACCTGGCCAGATCGGTCTATGCCAGGCATGTCCTCATGGAACCATGCAAAAACATCCGAGTTTGA

Protein sequence

MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVPSQEQVEVGTTQEEVPSQQGSGFPLMNSTIGSIHEGAGVSSSIKSGSKIEGLSRISTGTDLARSVYARHVLMEPCKNIRV
Homology
BLAST of Moc05g11400.1 vs. NCBI nr
Match: XP_022152119.1 (uncharacterized protein LOC111019909 [Momordica charantia])

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 68/78 (87.18%), Postives = 72/78 (92.31%), Query Frame = 0

Query: 1   MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVP 60
           MKGIAADMPHLQIDLS LKKKY+EKWASGPN TPGPQSLV KYVRELDSDYSD+EE+D P
Sbjct: 216 MKGIAADMPHLQIDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSDYSDMEEEDAP 275

Query: 61  SQEQVEVGTTQEEVPSQQ 79
           SQE  E+GTTQEEVPSQQ
Sbjct: 276 SQEPNEIGTTQEEVPSQQ 293

BLAST of Moc05g11400.1 vs. NCBI nr
Match: XP_022159252.1 (uncharacterized protein LOC111025665 [Momordica charantia])

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 68/79 (86.08%), Postives = 73/79 (92.41%), Query Frame = 0

Query: 1   MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVP 60
           MKGIAADMPHLQIDL+ LKKKY+EKWASGPN TP PQSLV+KYVRELDSDYSD+EE+D P
Sbjct: 454 MKGIAADMPHLQIDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSDYSDMEEEDAP 513

Query: 61  SQEQVEVGTTQEEVPSQQG 80
           SQE  EVGTTQEEVPSQQG
Sbjct: 514 SQEPXEVGTTQEEVPSQQG 532

BLAST of Moc05g11400.1 vs. NCBI nr
Match: XP_022147182.1 (uncharacterized protein LOC111016193 [Momordica charantia])

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-28
Identity = 65/79 (82.28%), Postives = 72/79 (91.14%), Query Frame = 0

Query: 1   MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVP 60
           MKGIAADMPHLQIDLS+LKK+Y+E WASGPN TPGPQSLV+KYVRELDSDYSD+EE+D P
Sbjct: 208 MKGIAADMPHLQIDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSDYSDMEEEDAP 267

Query: 61  SQEQVEVGTTQEEVPSQQG 80
           SQE  +VGTTQEE PSQ G
Sbjct: 268 SQEPTKVGTTQEEAPSQLG 286

BLAST of Moc05g11400.1 vs. NCBI nr
Match: XP_022158409.1 (uncharacterized protein LOC111024898 [Momordica charantia])

HSP 1 Score: 135.2 bits (339), Expect = 4.3e-28
Identity = 66/79 (83.54%), Postives = 71/79 (89.87%), Query Frame = 0

Query: 1   MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVP 60
           MKGIA DM HLQIDLS++KKKY+EKWASGPN TPGPQSLV+KYVRELDSDYSD+EE D P
Sbjct: 147 MKGIAVDMSHLQIDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSDYSDVEEGDAP 206

Query: 61  SQEQVEVGTTQEEVPSQQG 80
           SQE  EVGTTQEEVPSQ G
Sbjct: 207 SQEPNEVGTTQEEVPSQLG 225

BLAST of Moc05g11400.1 vs. NCBI nr
Match: XP_022158590.1 (uncharacterized protein LOC111025046 [Momordica charantia])

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-26
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0

Query: 1   MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVP 60
           MKGIAADMPHLQIDL +LKK+YA+KWASG + TPGPQSLV+KY RELD DYSD E++D P
Sbjct: 203 MKGIAADMPHLQIDLGDLKKRYAKKWASGLDGTPGPQSLVDKYARELDFDYSDTEDEDAP 262

Query: 61  SQEQVEVGTTQEEVPSQQG 80
           SQE  +VGTTQEEVPSQQG
Sbjct: 263 SQEPADVGTTQEEVPSQQG 281

BLAST of Moc05g11400.1 vs. ExPASy TrEMBL
Match: A0A6J1DF31 (uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019909 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 6.5e-30
Identity = 68/78 (87.18%), Postives = 72/78 (92.31%), Query Frame = 0

Query: 1   MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVP 60
           MKGIAADMPHLQIDLS LKKKY+EKWASGPN TPGPQSLV KYVRELDSDYSD+EE+D P
Sbjct: 216 MKGIAADMPHLQIDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSDYSDMEEEDAP 275

Query: 61  SQEQVEVGTTQEEVPSQQ 79
           SQE  E+GTTQEEVPSQQ
Sbjct: 276 SQEPNEIGTTQEEVPSQQ 293

BLAST of Moc05g11400.1 vs. ExPASy TrEMBL
Match: A0A6J1DZB3 (uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025665 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 6.5e-30
Identity = 68/79 (86.08%), Postives = 73/79 (92.41%), Query Frame = 0

Query: 1   MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVP 60
           MKGIAADMPHLQIDL+ LKKKY+EKWASGPN TP PQSLV+KYVRELDSDYSD+EE+D P
Sbjct: 454 MKGIAADMPHLQIDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSDYSDMEEEDAP 513

Query: 61  SQEQVEVGTTQEEVPSQQG 80
           SQE  EVGTTQEEVPSQQG
Sbjct: 514 SQEPXEVGTTQEEVPSQQG 532

BLAST of Moc05g11400.1 vs. ExPASy TrEMBL
Match: A0A6J1D1N9 (uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016193 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 5.5e-29
Identity = 65/79 (82.28%), Postives = 72/79 (91.14%), Query Frame = 0

Query: 1   MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVP 60
           MKGIAADMPHLQIDLS+LKK+Y+E WASGPN TPGPQSLV+KYVRELDSDYSD+EE+D P
Sbjct: 208 MKGIAADMPHLQIDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSDYSDMEEEDAP 267

Query: 61  SQEQVEVGTTQEEVPSQQG 80
           SQE  +VGTTQEE PSQ G
Sbjct: 268 SQEPTKVGTTQEEAPSQLG 286

BLAST of Moc05g11400.1 vs. ExPASy TrEMBL
Match: A0A6J1DZB5 (uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024898 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.1e-28
Identity = 66/79 (83.54%), Postives = 71/79 (89.87%), Query Frame = 0

Query: 1   MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVP 60
           MKGIA DM HLQIDLS++KKKY+EKWASGPN TPGPQSLV+KYVRELDSDYSD+EE D P
Sbjct: 147 MKGIAVDMSHLQIDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSDYSDVEEGDAP 206

Query: 61  SQEQVEVGTTQEEVPSQQG 80
           SQE  EVGTTQEEVPSQ G
Sbjct: 207 SQEPNEVGTTQEEVPSQLG 225

BLAST of Moc05g11400.1 vs. ExPASy TrEMBL
Match: A0A6J1DW92 (uncharacterized protein LOC111025046 OS=Momordica charantia OX=3673 GN=LOC111025046 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.8e-27
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0

Query: 1   MKGIAADMPHLQIDLSELKKKYAEKWASGPNSTPGPQSLVEKYVRELDSDYSDLEEKDVP 60
           MKGIAADMPHLQIDL +LKK+YA+KWASG + TPGPQSLV+KY RELD DYSD E++D P
Sbjct: 203 MKGIAADMPHLQIDLGDLKKRYAKKWASGLDGTPGPQSLVDKYARELDFDYSDTEDEDAP 262

Query: 61  SQEQVEVGTTQEEVPSQQG 80
           SQE  +VGTTQEEVPSQQG
Sbjct: 263 SQEPADVGTTQEEVPSQQG 281

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022152119.11.4e-2987.18uncharacterized protein LOC111019909 [Momordica charantia][more]
XP_022159252.11.4e-2986.08uncharacterized protein LOC111025665 [Momordica charantia][more]
XP_022147182.11.1e-2882.28uncharacterized protein LOC111016193 [Momordica charantia][more]
XP_022158409.14.3e-2883.54uncharacterized protein LOC111024898 [Momordica charantia][more]
XP_022158590.11.8e-2678.48uncharacterized protein LOC111025046 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DF316.5e-3087.18uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1DZB36.5e-3086.08uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1D1N95.5e-2982.28uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1DZB52.1e-2883.54uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DW928.8e-2778.48uncharacterized protein LOC111025046 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..89

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Moc05g11400Moc05g11400gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Moc05g11400.1.exon3Moc05g11400.1.exon3exon
Moc05g11400.1.exon2Moc05g11400.1.exon2exon
Moc05g11400.1.exon1Moc05g11400.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Moc05g11400.1cds.Moc05g11400.1_3CDS
cds.Moc05g11400.1cds.Moc05g11400.1_2CDS
cds.Moc05g11400.1cds.Moc05g11400.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Moc05g11400.1Moc05g11400.1-proteinpolypeptide