MS027851.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS027851.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold735: 238983 .. 239297 (+)
Sequence length	315
RNA-Seq Expression	MS027851.1
Synteny	MS027851.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAACGCCATTATCGTTCCCCAAGCATTAGAGGTAAGCTGTGCCGGCGTGACTCCGGTGAAAGATAGGAAAGACTGGGCAAAGAGGGAAAGCGGGAGCCCCGTTTCAAAACATTTTAGGGTAAAAACTCACCCACATGGGAGGACGGATGTCGATCCTCTCGCCCTCCGCCGGAAGATGCCTAAGAACATAGTCGGGCACTCGGTACTTCGAACGGATGTTCGGAGGTCTTGCTTCGTTGCCAACGGCGGACGTGAGTCATCGACAGATGGTTGGCCAAAAATGGAGCATTCCCACTACCGACCATGGTAA

mRNA sequence

ATGACCAACGCCATTATCGTTCCCCAAGCATTAGAGGTAAGCTGTGCCGGCGTGACTCCGGTGAAAGATAGGAAAGACTGGGCAAAGAGGGAAAGCGGGAGCCCCGTTTCAAAACATTTTAGGGTAAAAACTCACCCACATGGGAGGACGGATGTCGATCCTCTCGCCCTCCGCCGGAAGATGCCTAAGAACATAGTCGGGCACTCGGTACTTCGAACGGATGTTCGGAGGTCTTGCTTCGTTGCCAACGGCGGACGTGAGTCATCGACAGATGGTTGGCCAAAAATGGAGCATTCCCACTACCGACCATGGTAA

Coding sequence (CDS)

ATGACCAACGCCATTATCGTTCCCCAAGCATTAGAGGTAAGCTGTGCCGGCGTGACTCCGGTGAAAGATAGGAAAGACTGGGCAAAGAGGGAAAGCGGGAGCCCCGTTTCAAAACATTTTAGGGTAAAAACTCACCCACATGGGAGGACGGATGTCGATCCTCTCGCCCTCCGCCGGAAGATGCCTAAGAACATAGTCGGGCACTCGGTACTTCGAACGGATGTTCGGAGGTCTTGCTTCGTTGCCAACGGCGGACGTGAGTCATCGACAGATGGTTGGCCAAAAATGGAGCATTCCCACTACCGACCATGGTAA

Protein sequence

MTNAIIVPQALEVSCAGVTPVKDRKDWAKRESGSPVSKHFRVKTHPHGRTDVDPLALRRKMPKNIVGHSVLRTDVRRSCFVANGGRESSTDGWPKMEHSHYRPW

Homology

The following BLAST results are available for this feature:

BLAST of MS027851.1 vs.


Match Name	E-value	Identity	Description

BLAST of MS027851.1 vs.


Match Name	E-value	Identity	Description

BLAST of MS027851.1 vs.


Match Name	E-value	Identity	Description

BLAST of MS027851.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..52

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS027851	MS027851	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS027851.1-cds	MS027851.1-cds-scaffold735:238983..239297	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS027851.1	MS027851.1-protein	polypeptide