MS017560.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS017560.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein of unknown function (DUF506)
Location	scaffold373: 595124 .. 596491 (+)
Sequence length	852
RNA-Seq Expression	MS017560.1
Synteny	MS017560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGCTCCTCTTCGAGCTAAACGGCTCGCCGGAGCGGATCAGTGGCGCCGCCACGCGCCGCCGAGATCCGGCGGCAGCAGCGGAAGCGAACACTCCGCCGACGATTGTCTTTCCGAGCTGGTGCTCGATTTTTTGGAAGACGGCTGCCGGAGTCCATCGCCGCCTGAAGCGGAGGATTGTTGTTCCGACGCGGCAGAGGTCGATGTTGTAGAGGCCGATTGTACGGAGGTCGCCGGCGAAATCAGGAGTATTGTAAAGGCCGTGAACGGCGGCTATGTTGAGCCGTACAGAGAGCTGCTTGTGGCTAATGTTTGGGAAGCGGCGGAAATGGCTTTGTCGGACGGCGTCGTTTCGCGGCGGAGGCTCGTGACTTTCCTTCGCGAAGTCCACCATAATGCGGCTATTTGCAAGACGAAGTGGGGAAACTCCGGCGATCTCGCCGCCGGCGTCTACGAGTTCATCGACGTCGTCAACGGGAACCTCCGGTAATACAAAATTTCTCTCTTCTTTTAAAATTTTGGTTAAATTACATATTTTCTCTCAATTTTGTATTTAGTATTTGAATTTAAAATTTTTTAATAAGTCCATAACCAGTTTTTTATATACTTTTAAAAATTTTGTATTATATCTTTCCATTGTTTATTTTGTTTTTAATAGGTCTGTAGTATTAATTAATTCATAACAGTGATAATTTAATAATCTATGTGGTAGATTAATTTTGGGAGTAATCTTTAAATTATATTCTTATCCAACCACGTGAATATTCAACTAATGAAACCAATGAAATTAACAATAGAGACTTAATAGACATTAAAAAAAAAAATTTAAACACATGAGTAAAAAGGCACGACCTTAAAAATTCAAGTTTGATCTAAATTTTGTTACTGAGTATAGCTTGAAGCATATTCTTGCTCTCGTATAGTTAGTTGGAGGTTCAATCCCATGTCTCCACATTTGTCGAATGTTGAAATAATTTTGATTGAACTCATTTGTTCTACAAGGTACTTGATTGATGTCAACTTTCGTGCCCAGTTCGAGATTGCGAGGGCAACGATCCACTATTCAGAGTTATTGAAATGTCTACCTACGATTTTCATCGGGACGCCAACAGAACTAAAAAGGATCGTAAGGATCATGTGTGATGCAGTAAAGAGATCGCTCAATCAAACAAAGCTTTCAATGCCTCCATGGAGGAAGAATAATTACATGGTGAAGAAATGGTTGGGGTCATATCGTCGAACTACAAATCCAATTCCCGATAAGATGTCGGTGTCGAATACTTCACTTAGTTCATCGGTGAAATGTAGGTGGCTTGGATTTGACATCGTCATCTCTGATGTGGAGGTAAATGACTGTGCTTTTGTTTGC

mRNA sequence

GTGGCTCCTCTTCGAGCTAAACGGCTCGCCGGAGCGGATCAGTGGCGCCGCCACGCGCCGCCGAGATCCGGCGGCAGCAGCGGAAGCGAACACTCCGCCGACGATTGTCTTTCCGAGCTGGTGCTCGATTTTTTGGAAGACGGCTGCCGGAGTCCATCGCCGCCTGAAGCGGAGGATTGTTGTTCCGACGCGGCAGAGGTCGATGTTGTAGAGGCCGATTGTACGGAGGTCGCCGGCGAAATCAGGAGTATTGTAAAGGCCGTGAACGGCGGCTATGTTGAGCCGTACAGAGAGCTGCTTGTGGCTAATGTTTGGGAAGCGGCGGAAATGGCTTTGTCGGACGGCGTCGTTTCGCGGCGGAGGCTCGTGACTTTCCTTCGCGAAGTCCACCATAATGCGGCTATTTGCAAGACGAAGTGGGGAAACTCCGGCGATCTCGCCGCCGGCGTCTACGAGTTCATCGACGTCGTCAACGGGAACCTCCGGTACTTGATTGATGTCAACTTTCGTGCCCAGTTCGAGATTGCGAGGGCAACGATCCACTATTCAGAGTTATTGAAATGTCTACCTACGATTTTCATCGGGACGCCAACAGAACTAAAAAGGATCGTAAGGATCATGTGTGATGCAGTAAAGAGATCGCTCAATCAAACAAAGCTTTCAATGCCTCCATGGAGGAAGAATAATTACATGGTGAAGAAATGGTTGGGGTCATATCGTCGAACTACAAATCCAATTCCCGATAAGATGTCGGTGTCGAATACTTCACTTAGTTCATCGGTGAAATGTAGGTGGCTTGGATTTGACATCGTCATCTCTGATGTGGAGGTAAATGACTGTGCTTTTGTTTGC

Coding sequence (CDS)

GTGGCTCCTCTTCGAGCTAAACGGCTCGCCGGAGCGGATCAGTGGCGCCGCCACGCGCCGCCGAGATCCGGCGGCAGCAGCGGAAGCGAACACTCCGCCGACGATTGTCTTTCCGAGCTGGTGCTCGATTTTTTGGAAGACGGCTGCCGGAGTCCATCGCCGCCTGAAGCGGAGGATTGTTGTTCCGACGCGGCAGAGGTCGATGTTGTAGAGGCCGATTGTACGGAGGTCGCCGGCGAAATCAGGAGTATTGTAAAGGCCGTGAACGGCGGCTATGTTGAGCCGTACAGAGAGCTGCTTGTGGCTAATGTTTGGGAAGCGGCGGAAATGGCTTTGTCGGACGGCGTCGTTTCGCGGCGGAGGCTCGTGACTTTCCTTCGCGAAGTCCACCATAATGCGGCTATTTGCAAGACGAAGTGGGGAAACTCCGGCGATCTCGCCGCCGGCGTCTACGAGTTCATCGACGTCGTCAACGGGAACCTCCGGTACTTGATTGATGTCAACTTTCGTGCCCAGTTCGAGATTGCGAGGGCAACGATCCACTATTCAGAGTTATTGAAATGTCTACCTACGATTTTCATCGGGACGCCAACAGAACTAAAAAGGATCGTAAGGATCATGTGTGATGCAGTAAAGAGATCGCTCAATCAAACAAAGCTTTCAATGCCTCCATGGAGGAAGAATAATTACATGGTGAAGAAATGGTTGGGGTCATATCGTCGAACTACAAATCCAATTCCCGATAAGATGTCGGTGTCGAATACTTCACTTAGTTCATCGGTGAAATGTAGGTGGCTTGGATTTGACATCGTCATCTCTGATGTGGAGGTAAATGACTGTGCTTTTGTTTGC

Protein sequence

VAPLRAKRLAGADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLEDGCRSPSPPEAEDCCSDAAEVDVVEADCTEVAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRRLVTFLREVHHNAAICKTKWGNSGDLAAGVYEFIDVVNGNLRYLIDVNFRAQFEIARATIHYSELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRRTTNPIPDKMSVSNTSLSSSVKCRWLGFDIVISDVEVNDCAFVC

Homology

[Close]

BLAST of MS017560.1 vs. NCBI nr
Match: XP_022158200.1 (uncharacterized protein LOC111024736 [Momordica charantia])

HSP 1 Score: 554.3 bits (1427), Expect = 6.1e-154
Identity = 271/283 (95.76%), Postives = 273/283 (96.47%), Query Frame = 0


Query: 2   APLRAKRLAGADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLEDGCRSPSPPEAEDCC 61
           APLRAKRLA ADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLEDGCRSPSPPEAEDCC
Sbjct: 3   APLRAKRLAEADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLEDGCRSPSPPEAEDCC 62

Query: 62  SDAAEVDVVEADCTEVAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRR 121
           SDAAEVDVV ADCTEV GEIR+IVK VNGGYVEPYRELLVANVWEAAEMA SDGVVSRRR
Sbjct: 63  SDAAEVDVVAADCTEVVGEIRNIVKPVNGGYVEPYRELLVANVWEAAEMASSDGVVSRRR 122

Query: 122 LVTFLREVHHNAAICKTKWGNSGDLAAGVYEFIDVVNGNLRYLIDVNFRAQFEIARATIH 181
           LVTFLRE HHN AICKTKWGNSGD AAG YEFIDVVNGNLRYLIDVNFRAQFEIARATIH
Sbjct: 123 LVTFLREFHHNXAICKTKWGNSGDFAAGDYEFIDVVNGNLRYLIDVNFRAQFEIARATIH 182

Query: 182 YSELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRR 241
           YSELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRR
Sbjct: 183 YSELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRR 242

Query: 242 TTNPIPDKMSVSNTSLSSSVKCRWLGFDIVISDVEVNDCAFVC 285
           TTNP+PDKMSVSNTSL SSVKCRWLGFDIVISDVEVNDCAFVC
Sbjct: 243 TTNPVPDKMSVSNTSLGSSVKCRWLGFDIVISDVEVNDCAFVC 285

[Close]

BLAST of MS017560.1 vs. NCBI nr
Match: XP_022931005.1 (uncharacterized protein LOC111437331 [Cucurbita moschata])

HSP 1 Score: 304.7 bits (779), Expect = 8.5e-79
Identity = 163/259 (62.93%), Postives = 188/259 (72.59%), Query Frame = 0


Query: 28  GSEHSADDCLSELVLDFLEDG-CRSPSPPEAEDCCSDAAEVDVVEADCTEVAGEIRSIVK 87
           GSEHS D+CLSE+V+DF E G C S SP        DA E++V E DCT   GEIR +V 
Sbjct: 22  GSEHSPDECLSEMVVDFFEGGECGSSSPAGG---FFDATEMNVEETDCTAAVGEIRRMV- 81

Query: 88  AVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRRLVTFLREVHHNAAICKTKWGNSGDL 147
           A+N GYVEPYRELLV +V EAA  + S+G VSRRRLV  LRE+HH+AAICKTKWG S  +
Sbjct: 82  ALNDGYVEPYRELLVGDVMEAAASS-SNGDVSRRRLVMILRELHHDAAICKTKWGGSHGV 141

Query: 148 AAGVYEFIDVVNGNLRYLIDVNFRAQFEIARATIHYSELLKCLPTIFIGTPTELKRIVRI 207
           AAG YEF+DVV+G +RYLID NF AQFEI R TI Y+E+LK LP IFIGT  ELK+IVRI
Sbjct: 142 AAGDYEFVDVVSGKIRYLIDTNFPAQFEITRPTIQYTEILKSLPLIFIGTTEELKKIVRI 201

Query: 208 MCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRRTTNPIPDKM--SVSNTSLSSSVKCR 267
           MCDA KRSLN T L +PPWRKN YM  KWLG YR+T NPI DK   S S  +    VKCR
Sbjct: 202 MCDAAKRSLNLTNLIVPPWRKNGYMQNKWLGPYRQTVNPISDKFPTSTSKNTTHWQVKCR 261

Query: 268 WLGFDIVISDVEVNDCAFV 284
           W+GFD   S +E+ND  FV
Sbjct: 262 WIGFD-ATSSMELNDNTFV 274

[Close]

BLAST of MS017560.1 vs. NCBI nr
Match: KAG6606298.1 (hypothetical protein SDJN03_03615, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-78
Identity = 162/259 (62.55%), Postives = 190/259 (73.36%), Query Frame = 0


Query: 28  GSEHSADDCLSELVLDFLEDG-CRSPSPPEAEDCCSDAAEVDVVEADCTEVAGEIRSIVK 87
           GSEHSAD+CLSE+V+DF E G C S SP        DA E++V E DCT   GEIR +V 
Sbjct: 22  GSEHSADECLSEMVVDFFEGGECGSSSPAGG---FFDATEMNVEETDCTAAVGEIRRMV- 81

Query: 88  AVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRRLVTFLREVHHNAAICKTKWGNSGDL 147
           A+N GYVEPYRELLV +V EAA  + S+G VSRRRLV  LRE+HH+AAICKTKWG S  +
Sbjct: 82  ALNDGYVEPYRELLVGDVMEAAASS-SNGDVSRRRLVMILRELHHDAAICKTKWGGSHGV 141

Query: 148 AAGVYEFIDVVNGNLRYLIDVNFRAQFEIARATIHYSELLKCLPTIFIGTPTELKRIVRI 207
           AAG YEF+DVV+G +RYLID NF AQFEIAR TI Y+++LK LP IFIGT  ELK+IVRI
Sbjct: 142 AAGDYEFVDVVSGKIRYLIDTNFPAQFEIARPTIQYTKILKSLPLIFIGTAEELKKIVRI 201

Query: 208 MCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRRTTNPIPDKMSVSNTSLSS--SVKCR 267
           MCDA KRSLN T L +PPWR+N YM  KWLG YRRT NPI D    S T  ++   VKCR
Sbjct: 202 MCDAAKRSLNLTNLIVPPWRRNGYMQNKWLGPYRRTVNPISDNFPTSTTKNTTHWQVKCR 261

Query: 268 WLGFDIVISDVEVNDCAFV 284
           W+GFD   S +E+ND A +
Sbjct: 262 WIGFD-ATSSMELNDNASI 274

[Close]

BLAST of MS017560.1 vs. NCBI nr
Match: XP_011651670.1 (uncharacterized protein LOC105434933 [Cucumis sativus] >KGN58383.1 hypothetical protein Csa_000949 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 2.7e-77
Identity = 171/288 (59.38%), Postives = 205/288 (71.18%), Query Frame = 0


Query: 8   RLAGADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLE--DGCRSPSPPEAEDCCSDAA 67
           RL G++  R+  P  S   SGSEH A++CLSE+V+DFLE  DGCR       ED  +D  
Sbjct: 6   RLIGSNDQRQQPP--SSSDSGSEHLAEECLSEMVVDFLEDYDGCRR---SWREDDFTDGE 65

Query: 68  EVDVV---EADCTEVAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMAL---SDGVVSR 127
            +DV+   EAD TE  GEIR +V +VNGG VE YRE+LV NV EAAE+A    SDGVVSR
Sbjct: 66  AMDVMAGAEADYTEAVGEIRRMV-SVNGGNVEGYREVLVDNVLEAAELAAGSSSDGVVSR 125

Query: 128 RRLVTFLREVHHNAAICKTKWGNSGDLAAGVYEFID-VVNGNLRYLIDVNFRAQFEIARA 187
           RRL+  LRE+H+NAAICKTKWG+S  +AAG YEF+D +VNGN+RYLID NFR QFEIARA
Sbjct: 126 RRLMLILRELHYNAAICKTKWGSSSGVAAGDYEFVDIIVNGNIRYLIDTNFRGQFEIARA 185

Query: 188 TIHYSELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGS 247
           T+ Y ELLK LP IFIGT  ELK++VRIMCDA K SLN   L +PPWRK  YM  KWLG 
Sbjct: 186 TVQYKELLKSLPLIFIGTIEELKKMVRIMCDAAKVSLNHRNLLVPPWRKRIYMKNKWLGP 245

Query: 248 YRRTTNPIPDK--MSVSNTSLSSSVKCRWLGFDIVISDVEVNDCAFVC 285
           YRRT N + DK   ++ + S S  VKCRW+GFD  +++VE N  A VC
Sbjct: 246 YRRTINSVCDKSPTTILDNSTSWPVKCRWIGFD--MTNVETNVNASVC 285

[Close]

BLAST of MS017560.1 vs. NCBI nr
Match: KAA0068089.1 (uncharacterized protein E6C27_scaffold238G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 7.9e-77
Identity = 163/278 (58.63%), Postives = 192/278 (69.06%), Query Frame = 0


Query: 9   LAGADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLE--DGCRSPSPPEAEDCCSDAAE 68
           L G +  R+   P S   SGSEH A++CLSE+V+DFLE  DG RS     AED  +D   
Sbjct: 7   LIGTNDHRQQQQPPSSSHSGSEHLAEECLSEMVVDFLEDYDGYRS---SWAEDDLTDGEA 66

Query: 69  VDVV---EADCTEVAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRRLV 128
           +DV+   E DC E  GEIR +V    G  VE YRE+LV NV  AA     +GVVSRRRLV
Sbjct: 67  MDVMAAGEGDCREAVGEIRRMVSVKGGNNVEGYREVLVDNVRAAASSL--EGVVSRRRLV 126

Query: 129 TFLREVHHNAAICKTKWGNSGDLAAGVYEFIDVVNGNLRYLIDVNFRAQFEIARATIHYS 188
             LRE+H+NAAICKTKWG+S  +AAG YEF+DVVNGN+RYLID NFRAQFEIARAT+ Y 
Sbjct: 127 LILRELHYNAAICKTKWGSSRGVAAGDYEFVDVVNGNIRYLIDTNFRAQFEIARATVQYK 186

Query: 189 ELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRRTT 248
           ELLK LP IFIGT  ELK++VRIMCDA K SLN   LS+PPWRK  YM  KWLG YRRT 
Sbjct: 187 ELLKSLPLIFIGTVEELKKMVRIMCDAAKVSLNHRNLSVPPWRKGIYMKNKWLGPYRRTI 246

Query: 249 NPIPDKMSVSNT---SLSSSVKCRWLGFDIVISDVEVN 279
           NPI ++ S + T   S S +VKCRW+GFD    +  +N
Sbjct: 247 NPIQEEKSPTTTLDNSTSWAVKCRWIGFDTTNVETNIN 279

[Close]

BLAST of MS017560.1 vs. ExPASy TrEMBL
Match: A0A6J1DV64 (uncharacterized protein LOC111024736 OS=Momordica charantia OX=3673 GN=LOC111024736 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.0e-154
Identity = 271/283 (95.76%), Postives = 273/283 (96.47%), Query Frame = 0


Query: 2   APLRAKRLAGADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLEDGCRSPSPPEAEDCC 61
           APLRAKRLA ADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLEDGCRSPSPPEAEDCC
Sbjct: 3   APLRAKRLAEADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLEDGCRSPSPPEAEDCC 62

Query: 62  SDAAEVDVVEADCTEVAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRR 121
           SDAAEVDVV ADCTEV GEIR+IVK VNGGYVEPYRELLVANVWEAAEMA SDGVVSRRR
Sbjct: 63  SDAAEVDVVAADCTEVVGEIRNIVKPVNGGYVEPYRELLVANVWEAAEMASSDGVVSRRR 122

Query: 122 LVTFLREVHHNAAICKTKWGNSGDLAAGVYEFIDVVNGNLRYLIDVNFRAQFEIARATIH 181
           LVTFLRE HHN AICKTKWGNSGD AAG YEFIDVVNGNLRYLIDVNFRAQFEIARATIH
Sbjct: 123 LVTFLREFHHNXAICKTKWGNSGDFAAGDYEFIDVVNGNLRYLIDVNFRAQFEIARATIH 182

Query: 182 YSELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRR 241
           YSELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRR
Sbjct: 183 YSELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRR 242

Query: 242 TTNPIPDKMSVSNTSLSSSVKCRWLGFDIVISDVEVNDCAFVC 285
           TTNP+PDKMSVSNTSL SSVKCRWLGFDIVISDVEVNDCAFVC
Sbjct: 243 TTNPVPDKMSVSNTSLGSSVKCRWLGFDIVISDVEVNDCAFVC 285

[Close]

BLAST of MS017560.1 vs. ExPASy TrEMBL
Match: A0A6J1EYC3 (uncharacterized protein LOC111437331 OS=Cucurbita moschata OX=3662 GN=LOC111437331 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 4.1e-79
Identity = 163/259 (62.93%), Postives = 188/259 (72.59%), Query Frame = 0


Query: 28  GSEHSADDCLSELVLDFLEDG-CRSPSPPEAEDCCSDAAEVDVVEADCTEVAGEIRSIVK 87
           GSEHS D+CLSE+V+DF E G C S SP        DA E++V E DCT   GEIR +V 
Sbjct: 22  GSEHSPDECLSEMVVDFFEGGECGSSSPAGG---FFDATEMNVEETDCTAAVGEIRRMV- 81

Query: 88  AVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRRLVTFLREVHHNAAICKTKWGNSGDL 147
           A+N GYVEPYRELLV +V EAA  + S+G VSRRRLV  LRE+HH+AAICKTKWG S  +
Sbjct: 82  ALNDGYVEPYRELLVGDVMEAAASS-SNGDVSRRRLVMILRELHHDAAICKTKWGGSHGV 141

Query: 148 AAGVYEFIDVVNGNLRYLIDVNFRAQFEIARATIHYSELLKCLPTIFIGTPTELKRIVRI 207
           AAG YEF+DVV+G +RYLID NF AQFEI R TI Y+E+LK LP IFIGT  ELK+IVRI
Sbjct: 142 AAGDYEFVDVVSGKIRYLIDTNFPAQFEITRPTIQYTEILKSLPLIFIGTTEELKKIVRI 201

Query: 208 MCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRRTTNPIPDKM--SVSNTSLSSSVKCR 267
           MCDA KRSLN T L +PPWRKN YM  KWLG YR+T NPI DK   S S  +    VKCR
Sbjct: 202 MCDAAKRSLNLTNLIVPPWRKNGYMQNKWLGPYRQTVNPISDKFPTSTSKNTTHWQVKCR 261

Query: 268 WLGFDIVISDVEVNDCAFV 284
           W+GFD   S +E+ND  FV
Sbjct: 262 WIGFD-ATSSMELNDNTFV 274

[Close]

BLAST of MS017560.1 vs. ExPASy TrEMBL
Match: A0A0A0L963 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G634350 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.3e-77
Identity = 171/288 (59.38%), Postives = 205/288 (71.18%), Query Frame = 0


Query: 8   RLAGADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLE--DGCRSPSPPEAEDCCSDAA 67
           RL G++  R+  P  S   SGSEH A++CLSE+V+DFLE  DGCR       ED  +D  
Sbjct: 6   RLIGSNDQRQQPP--SSSDSGSEHLAEECLSEMVVDFLEDYDGCRR---SWREDDFTDGE 65

Query: 68  EVDVV---EADCTEVAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMAL---SDGVVSR 127
            +DV+   EAD TE  GEIR +V +VNGG VE YRE+LV NV EAAE+A    SDGVVSR
Sbjct: 66  AMDVMAGAEADYTEAVGEIRRMV-SVNGGNVEGYREVLVDNVLEAAELAAGSSSDGVVSR 125

Query: 128 RRLVTFLREVHHNAAICKTKWGNSGDLAAGVYEFID-VVNGNLRYLIDVNFRAQFEIARA 187
           RRL+  LRE+H+NAAICKTKWG+S  +AAG YEF+D +VNGN+RYLID NFR QFEIARA
Sbjct: 126 RRLMLILRELHYNAAICKTKWGSSSGVAAGDYEFVDIIVNGNIRYLIDTNFRGQFEIARA 185

Query: 188 TIHYSELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGS 247
           T+ Y ELLK LP IFIGT  ELK++VRIMCDA K SLN   L +PPWRK  YM  KWLG 
Sbjct: 186 TVQYKELLKSLPLIFIGTIEELKKMVRIMCDAAKVSLNHRNLLVPPWRKRIYMKNKWLGP 245

Query: 248 YRRTTNPIPDK--MSVSNTSLSSSVKCRWLGFDIVISDVEVNDCAFVC 285
           YRRT N + DK   ++ + S S  VKCRW+GFD  +++VE N  A VC
Sbjct: 246 YRRTINSVCDKSPTTILDNSTSWPVKCRWIGFD--MTNVETNVNASVC 285

[Close]

BLAST of MS017560.1 vs. ExPASy TrEMBL
Match: A0A5A7VSJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00420 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 3.8e-77
Identity = 163/278 (58.63%), Postives = 192/278 (69.06%), Query Frame = 0


Query: 9   LAGADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLE--DGCRSPSPPEAEDCCSDAAE 68
           L G +  R+   P S   SGSEH A++CLSE+V+DFLE  DG RS     AED  +D   
Sbjct: 7   LIGTNDHRQQQQPPSSSHSGSEHLAEECLSEMVVDFLEDYDGYRS---SWAEDDLTDGEA 66

Query: 69  VDVV---EADCTEVAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRRLV 128
           +DV+   E DC E  GEIR +V    G  VE YRE+LV NV  AA     +GVVSRRRLV
Sbjct: 67  MDVMAAGEGDCREAVGEIRRMVSVKGGNNVEGYREVLVDNVRAAASSL--EGVVSRRRLV 126

Query: 129 TFLREVHHNAAICKTKWGNSGDLAAGVYEFIDVVNGNLRYLIDVNFRAQFEIARATIHYS 188
             LRE+H+NAAICKTKWG+S  +AAG YEF+DVVNGN+RYLID NFRAQFEIARAT+ Y 
Sbjct: 127 LILRELHYNAAICKTKWGSSRGVAAGDYEFVDVVNGNIRYLIDTNFRAQFEIARATVQYK 186

Query: 189 ELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRRTT 248
           ELLK LP IFIGT  ELK++VRIMCDA K SLN   LS+PPWRK  YM  KWLG YRRT 
Sbjct: 187 ELLKSLPLIFIGTVEELKKMVRIMCDAAKVSLNHRNLSVPPWRKGIYMKNKWLGPYRRTI 246

Query: 249 NPIPDKMSVSNT---SLSSSVKCRWLGFDIVISDVEVN 279
           NPI ++ S + T   S S +VKCRW+GFD    +  +N
Sbjct: 247 NPIQEEKSPTTTLDNSTSWAVKCRWIGFDTTNVETNIN 279

[Close]

BLAST of MS017560.1 vs. ExPASy TrEMBL
Match: A0A5D3DR97 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00290 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.5e-76
Identity = 162/278 (58.27%), Postives = 191/278 (68.71%), Query Frame = 0


Query: 9   LAGADQWRRHAPPRSGGSSGSEHSADDCLSELVLDFLE--DGCRSPSPPEAEDCCSDAAE 68
           L G +  R+   P S   SGSEH A++CLSE+V+DFLE  DG RS     AED  +D   
Sbjct: 7   LIGTNDHRQQQQPPSSSHSGSEHLAEECLSEMVVDFLEDYDGYRS---SWAEDDLTDGEA 66

Query: 69  VDVV---EADCTEVAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRRLV 128
           +DV+   E DC E  GEIR +V    G  VE YRE+LV NV  AA     +GVVSRRRLV
Sbjct: 67  MDVMAAGEGDCREAVGEIRRMVSVKGGNNVEGYREVLVDNVRAAASSL--EGVVSRRRLV 126

Query: 129 TFLREVHHNAAICKTKWGNSGDLAAGVYEFIDVVNGNLRYLIDVNFRAQFEIARATIHYS 188
             LRE+H+NAAICKTKWG+S  + AG YEF+DVVNGN+RYLID NFRAQFEIARAT+ Y 
Sbjct: 127 LILRELHYNAAICKTKWGSSRGVTAGNYEFVDVVNGNIRYLIDTNFRAQFEIARATVQYK 186

Query: 189 ELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRRTT 248
           ELLK LP IFIGT  ELK++VRIMCDA K SLN   LS+PPWRK  YM  KWLG YRRT 
Sbjct: 187 ELLKSLPLIFIGTVEELKKMVRIMCDAAKVSLNHRNLSVPPWRKGIYMKNKWLGPYRRTI 246

Query: 249 NPIPDKMSVSNT---SLSSSVKCRWLGFDIVISDVEVN 279
           NPI ++ S + T   S S +VKCRW+GFD    +  +N
Sbjct: 247 NPIHEEKSPTTTLDNSTSWAVKCRWIGFDTTNVETNIN 279

[Close]

BLAST of MS017560.1 vs. TAIR 10
Match: AT3G07350.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 176.0 bits (445), Expect = 4.2e-44
Identity = 106/271 (39.11%), Postives = 157/271 (57.93%), Query Frame = 0


Query: 26  SSGSEHSAD----------DCLSELVLDFLEDGCRSPSPPEAEDCCSDA-----AEVDVV 85
           SSGSEH+ D           CLS+LV  FLED        + E C  D      ++ D  
Sbjct: 27  SSGSEHTGDGIEDYEDDDSPCLSDLVQGFLED---EVDTVDDESCWCDQDSGSDSDSDSE 86

Query: 86  EADCTEVAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMALSDG------VVSRRRLVT 145
             +  + A +I  +++  N    + Y   ++ +V  A EM  S G       V +R++++
Sbjct: 87  LGELPDFADDIAKLLR--NSLREDSYGRTVLVHVARAMEMLSSLGSQPEQRAVFQRKVMS 146

Query: 146 FLREVHHNAAICKTKWGNSGDLAAGVYEFIDVV------NGNLRYLIDVNFRAQFEIARA 205
            LRE+ HNAAICKTKW +SG L AG +EFIDVV      + ++R+++D++F ++F+IAR 
Sbjct: 147 LLRELGHNAAICKTKWKSSGGLTAGNHEFIDVVYTPSASSQSVRFIVDLDFSSRFQIARP 206

Query: 206 TIHYSELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGS 265
           T  Y+ +L+ LP +F+G   +LKRI+R++CDA + SL    L++PPWRKN YM  +WLG 
Sbjct: 207 TSQYARVLQSLPAVFVGKGDDLKRILRLVCDAARISLRNRGLTLPPWRKNRYMQTRWLGP 266

Query: 266 YRRTTNPIPDKMSVSNTSLSSSVKCRWLGFD 270
           Y+RTTN  P      +TS   +V CR +GFD
Sbjct: 267 YKRTTNLTP------STSGVDTVMCRAIGFD 286

[Close]

BLAST of MS017560.1 vs. TAIR 10
Match: AT3G25240.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 159.8 bits (403), Expect = 3.1e-39
Identity = 103/260 (39.62%), Postives = 145/260 (55.77%), Query Frame = 0


Query: 37  LSELVLDFLEDGCRSPSPPEAEDCCSDAAEVDVVEADCTEVAGE--IRSIVKAVNGGYVE 96
           L ELV  FLEDG      PE     SD    D+ E    E +GE  +  +  AV+    +
Sbjct: 37  LCELVHGFLEDG------PEESFYDSDP---DLSETSSAEHSGEASVEIVRMAVSFSDSD 96

Query: 97  PYRELLVANVWEAAEM----ALSDGVVSRRRLVTFLREVHHNAAICKTKWGNSGDLAAGV 156
           PYR LL+A+V  A E+       +  V R ++ +FLRE+ H+AA+C +KW +S  L AG 
Sbjct: 97  PYRNLLLAHVLRAVEVYSGFRSRNKTVFRDKVASFLRELGHDAAVCVSKWTSSSKLIAGS 156

Query: 157 YEFIDVVN-------GNLRYLIDVNFRAQFEIARATIHYSELLKCLPTIFIGTPTELKRI 216
           Y FIDVV+         +RYL+D++F ++FEIAR T  Y+  L+ LP +F+G    L+ I
Sbjct: 157 YHFIDVVHKPSDNDQKAVRYLVDLDFASEFEIARPTREYTRGLQLLPNVFVGNEENLRTI 216

Query: 217 VRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRRTTNPIPDKMSVSNTSLSSSVKC 276
           VR  CDA KRS+    LS+PPWR+++Y+  KW G Y+R    +   + V   + S +V C
Sbjct: 217 VRESCDAAKRSMKSRGLSLPPWRRSSYLQHKWFGPYKR---KVGSSLGVKPLN-SDAVSC 276

Query: 277 RWLGFDIVISDVEVNDCAFV 284
           R LGFD    D  VN   F+
Sbjct: 277 RSLGFD----DGAVNTRLFI 279

[Close]

BLAST of MS017560.1 vs. TAIR 10
Match: AT1G12030.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-33
Identity = 87/247 (35.22%), Postives = 130/247 (52.63%), Query Frame = 0


Query: 10  AGADQWRRHAPPRSGGSSGSEHSADDC--LSELVLDFLEDGCRSPSPPEAEDCCSDA--- 69
           A  D     A P    SSGS+HS DD   L +LV  F++         E E    DA   
Sbjct: 13  AAFDVAAARARPPCASSSGSDHSPDDTEDLWDLVESFID--------REVETLPEDAFQE 72

Query: 70  AEVDVVEADCTEVAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRRLVT 129
            E D  + D  +V   +R I++  N G  E  R      + + A  A       +R  + 
Sbjct: 73  EEDDKSDEDYEDVKERLREILE--NHGGEERQR------IMDEAVNASRVFAGEKRHFMA 132

Query: 130 FLREVHHNAAICKTKWGNSGDLAAGVYEFIDVVNGNL-RYLIDVNFRAQFEIARATIHYS 189
           +LR    +A +CK++W   G   AG YE++DV  G+  RY+++ N   +FEIAR T  Y 
Sbjct: 133 YLRNKGFDAGLCKSRWEKFGKNTAGKYEYVDVKAGDKNRYIVETNLAGEFEIARPTTRYL 192

Query: 190 ELLKCLPTIFIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRRTT 249
            +L  +P +F+GTP ELK++VRIMC  ++RS+ +  + +PPWR+N YM  KW G Y+RT+
Sbjct: 193 SVLAQVPRVFVGTPEELKQLVRIMCFEIRRSMKRADIFVPPWRRNGYMQAKWFGHYKRTS 243

Query: 250 NPIPDKM 251
           N +  ++
Sbjct: 253 NEVVSRV 243

[Close]

BLAST of MS017560.1 vs. TAIR 10
Match: AT1G62420.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 137.1 bits (344), Expect = 2.2e-32
Identity = 79/226 (34.96%), Postives = 120/226 (53.10%), Query Frame = 0


Query: 21  PRSGGSSGSEHSADDCLSELVLDFLEDGCRSPSPPEAEDCCSDAAEVDVVEADCTEVAGE 80
           P    SSGS+HS D  LS+LV  F+E         E +    +  E    + +  +V   
Sbjct: 24  PPCDNSSGSDHSPD--LSDLVASFIE--------KEGQIVLREEEETSSDDNNLEDVNER 83

Query: 81  IRSIVKAVNGGYVEPYRELLVANVWEAAEMALSDGVVSRRRLVTFLREVHHNAAICKTKW 140
           +R +++ ++ G     R  +++   E A   + D   S+R L+ FLR    +A +CK+ W
Sbjct: 84  LRKLLEGLSCG---EERMRILSATMEVAGTFVGDISSSKRHLMAFLRNKGFDAGLCKSSW 143

Query: 141 GNSGDLAAGVYEFIDVVNG---NLRYLIDVNFRAQFEIARATIHYSELLKCLPTIFIGTP 200
              G    G YE++DV  G   N RY ++ N   +FEIAR T  Y  +L  +P +F+GT 
Sbjct: 144 ERFGKNTGGKYEYVDVRCGGDYNNRYFVETNLAGEFEIARPTKRYLSILSQVPRVFVGTS 203

Query: 201 TELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRRTT 244
            ELK +VRIMC  ++RS+    + +PPWR+N YM  KW G Y+RT+
Sbjct: 204 EELKLLVRIMCHEMRRSMKHVGIHVPPWRRNGYMQAKWFGFYKRTS 236

[Close]

BLAST of MS017560.1 vs. TAIR 10
Match: AT2G38820.2 (Protein of unknown function (DUF506) )

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-28
Identity = 79/229 (34.50%), Postives = 126/229 (55.02%), Query Frame = 0


Query: 21  PRSGGSSGSEHSADDCLSELVLDFLEDGCRSPSPPEAEDCCS----DAAEVDVVEADCTE 80
           P S G+SG    +  CL+++VL+F+ED             C+       E    E +C+ 
Sbjct: 58  PLSRGNSGDFEPSSVCLAKMVLNFMEDNNGGEKQRCGRSRCNCFSGSGTESSDDETECS- 117

Query: 81  VAGEIRSIVKAVNGGYVEPYRELLVANVWEAAEMA----LSDGVVSRRRLVTFLREVHHN 140
            +GE   I+K++        R LL  +V + AE +    L DG    + +   L  + ++
Sbjct: 118 -SGEACEILKSLVLCKSIRVRNLL-TDVTKIAETSKNCKLKDG-SCLKSVANGLVSLGYD 177

Query: 141 AAICKTKWGNSGDLAAGVYEFIDVVNGNLRYLIDVNFRAQFEIARATIHYSELLKCLPTI 200
           AA+CK++W  S    AG YE++DV+    R LID++F+++FEIARAT  Y  +L+ LP I
Sbjct: 178 AALCKSRWEKSPSCPAGEYEYVDVIMKGERLLIDIDFKSKFEIARATKTYKSMLQTLPYI 237

Query: 201 FIGTPTELKRIVRIMCDAVKRSLNQTKLSMPPWRKNNYMVKKWLGSYRR 242
           F+G    L++I+ ++C A K+SL +  L +PPWR+  Y+  KWL S+ R
Sbjct: 238 FVGKADRLQKIIVLICKAAKQSLKKKGLHVPPWRRAEYVKSKWLSSHVR 282

The following BLAST results are available for this feature:

BLAST of MS017560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158200.1	6.1e-154	95.76	uncharacterized protein LOC111024736 [Momordica charantia]	[more]
XP_022931005.1	8.5e-79	62.93	uncharacterized protein LOC111437331 [Cucurbita moschata]	[more]
KAG6606298.1	1.1e-78	62.55	hypothetical protein SDJN03_03615, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_011651670.1	2.7e-77	59.38	uncharacterized protein LOC105434933 [Cucumis sativus] >KGN58383.1 hypothetical ...	[more]
KAA0068089.1	7.9e-77	58.63	uncharacterized protein E6C27_scaffold238G00420 [Cucumis melo var. makuwa]	[more]

BLAST of MS017560.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS017560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DV64	3.0e-154	95.76	uncharacterized protein LOC111024736 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1EYC3	4.1e-79	62.93	uncharacterized protein LOC111437331 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A0A0L963	1.3e-77	59.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G634350 PE=4 SV=1	[more]
A0A5A7VSJ2	3.8e-77	58.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DR97	1.5e-76	58.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS017560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07350.1	4.2e-44	39.11	Protein of unknown function (DUF506)	[more]
AT3G25240.1	3.1e-39	39.62	Protein of unknown function (DUF506)	[more]
AT1G12030.1	2.0e-33	35.22	Protein of unknown function (DUF506)	[more]
AT1G62420.1	2.2e-32	34.96	Protein of unknown function (DUF506)	[more]
AT2G38820.2	1.1e-28	34.50	Protein of unknown function (DUF506)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006502	Protein of unknown function PDDEXK-like	PFAM	PF04720	PDDEXK_6	coord: 39..241 e-value: 1.7E-55 score: 188.4
IPR006502	Protein of unknown function PDDEXK-like	TIGRFAM	TIGR01615	TIGR01615	coord: 120..242 e-value: 1.6E-45 score: 152.1
IPR006502	Protein of unknown function PDDEXK-like	PANTHER	PTHR31579	OS03G0796600 PROTEIN	coord: 22..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR31579:SF68	IMPORT ATP-BINDING PROTEIN, PUTATIVE (DUF506)-RELATED	coord: 22..266

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS017560	MS017560	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS017560.1-cds	MS017560.1-cds-scaffold373:595124..595608	CDS
MS017560.1-cds	MS017560.1-cds-scaffold373:596125..596491	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS017560.1	MS017560.1-protein	polypeptide