MS014546.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS014546.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein GLUTAMINE DUMPER 6-like
Location	scaffold553: 804527 .. 804904 (-)
Sequence length	378
RNA-Seq Expression	MS014546.1
Synteny	MS014546.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCGCCTCGCCGCTGCATTTGCACCACCACCACTCGCGGCCGCCGCCGCCCCCAAGCTCCACCCATGGAAATCCCCTATCCCTTACCTCTTCGGCGGCCTATCTCTCACCATGCTTCTCATCGCCGGAGCTCTGATCGTCCTCGCATGCTCCTATCGAAAACGCTTCTCCGGTAACTCTTCCGAGAAGGAGCCGCCGGCCGCCGCGCCCGCCGACGTGGAGCTTGTAATGGAGCCGAAGATCTTGGTCATCATGGCCGGAGACGACATGCCCACGTTCTTGGCTACGCCTGCCACCGCCGCCGCCGCCGACGTCCCACGGCGTTGCAATTGCTCGGCATTAAAGCAACGTGACGGCGATCAGAATCAGAATCCC

mRNA sequence

ATGAGGCGCCTCGCCGCTGCATTTGCACCACCACCACTCGCGGCCGCCGCCGCCCCCAAGCTCCACCCATGGAAATCCCCTATCCCTTACCTCTTCGGCGGCCTATCTCTCACCATGCTTCTCATCGCCGGAGCTCTGATCGTCCTCGCATGCTCCTATCGAAAACGCTTCTCCGGTAACTCTTCCGAGAAGGAGCCGCCGGCCGCCGCGCCCGCCGACGTGGAGCTTGTAATGGAGCCGAAGATCTTGGTCATCATGGCCGGAGACGACATGCCCACGTTCTTGGCTACGCCTGCCACCGCCGCCGCCGCCGACGTCCCACGGCGTTGCAATTGCTCGGCATTAAAGCAACGTGACGGCGATCAGAATCAGAATCCC

Coding sequence (CDS)

ATGAGGCGCCTCGCCGCTGCATTTGCACCACCACCACTCGCGGCCGCCGCCGCCCCCAAGCTCCACCCATGGAAATCCCCTATCCCTTACCTCTTCGGCGGCCTATCTCTCACCATGCTTCTCATCGCCGGAGCTCTGATCGTCCTCGCATGCTCCTATCGAAAACGCTTCTCCGGTAACTCTTCCGAGAAGGAGCCGCCGGCCGCCGCGCCCGCCGACGTGGAGCTTGTAATGGAGCCGAAGATCTTGGTCATCATGGCCGGAGACGACATGCCCACGTTCTTGGCTACGCCTGCCACCGCCGCCGCCGCCGACGTCCCACGGCGTTGCAATTGCTCGGCATTAAAGCAACGTGACGGCGATCAGAATCAGAATCCC

Protein sequence

MRRLAAAFAPPPLAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRFSGNSSEKEPPAAAPADVELVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALKQRDGDQNQNP

Homology

[Close]

BLAST of MS014546.1 vs. NCBI nr
Match: XP_038887934.1 (protein GLUTAMINE DUMPER 2-like [Benincasa hispida])

HSP 1 Score: 156.8 bits (395), Expect = 1.3e-34
Identity = 91/126 (72.22%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 1   MRRLAAAFAPPPLAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRFSGN 60
           MRRLAAA APPP AA    KLH WKSPIPYLFGGLSL +LLIA ALI+LACS+RKRF+G 
Sbjct: 1   MRRLAAATAPPPTAAV---KLHLWKSPIPYLFGGLSLALLLIAAALIILACSFRKRFTG- 60

Query: 61  SSEKEPPAAAPADVELVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALKQRDG 120
             EK+P AAA A V+LVMEPK+LVIMAGD+MPTFLA PATAAAA  P  C CSA  Q+DG
Sbjct: 61  -GEKDPQAAASAAVDLVMEPKVLVIMAGDNMPTFLALPATAAAALPP--CRCSA-NQQDG 118

Query: 121 DQNQNP 127
           +QN +P
Sbjct: 121 NQNHSP 118

[Close]

BLAST of MS014546.1 vs. NCBI nr
Match: KAG6607088.1 (Protein GLUTAMINE DUMPER 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.1 bits (370), Expect = 1.0e-31
Identity = 83/123 (67.48%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 1   MRRLAAAFAPPPLAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRF--- 60
           MRRLA A APPP AA    KLH W SPIPYLFGGL LTMLLIA ALI+LACS+RKRF   
Sbjct: 1   MRRLATA-APPPTAA----KLHLWNSPIPYLFGGLFLTMLLIAVALIILACSFRKRFFTG 60

Query: 61  -SGNSSEKEPPAAAPADVELVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALK 120
            S   S+K+PP A  A +E VMEPKILV+MAG++ PTFLATPATAA  +VPRRC+C+A++
Sbjct: 61  HSSPGSQKDPPVAGSAAMEPVMEPKILVVMAGNNTPTFLATPATAALGNVPRRCSCTAIQ 118

[Close]

BLAST of MS014546.1 vs. NCBI nr
Match: XP_022949049.1 (protein GLUTAMINE DUMPER 6-like [Cucurbita moschata])

HSP 1 Score: 145.2 bits (365), Expect = 3.8e-31
Identity = 82/123 (66.67%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 1   MRRLAAAFAPPPLAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRF--- 60
           MRRLA A APPP AA    KLH W SPIPYLFGGL LTMLLIA ALI+LACS+RKRF   
Sbjct: 1   MRRLATA-APPPTAA----KLHLWNSPIPYLFGGLFLTMLLIAVALIILACSFRKRFFTG 60

Query: 61  -SGNSSEKEPPAAAPADVELVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALK 120
            S   S+K+PP A  A +E VMEPKILV+MAG++ PTFLATPA AA  +VPRRC+C+A++
Sbjct: 61  HSSPGSQKDPPVAGSAAMEPVMEPKILVVMAGNNTPTFLATPAAAALGNVPRRCSCTAIQ 118

[Close]

BLAST of MS014546.1 vs. NCBI nr
Match: XP_023524592.1 (protein GLUTAMINE DUMPER 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-30
Identity = 81/123 (65.85%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 1   MRRLAAAFAPPPLAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRF--- 60
           MRRLA A APPP AA     LH W SPIPYLFGGL LTMLLIA ALI+LACS+RKRF   
Sbjct: 1   MRRLATA-APPPTAA----NLHLWNSPIPYLFGGLFLTMLLIAVALIILACSFRKRFFTG 60

Query: 61  -SGNSSEKEPPAAAPADVELVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALK 120
            S   S+K+PP    A +ELVMEPKILVIMAG++ PTFLA PA AA  +VPRRC+C+A++
Sbjct: 61  HSSPGSQKDPPVTGSAAMELVMEPKILVIMAGNNTPTFLAMPAAAALGNVPRRCSCTAIQ 118

[Close]

BLAST of MS014546.1 vs. NCBI nr
Match: XP_022998640.1 (protein GLUTAMINE DUMPER 6-like [Cucurbita maxima])

HSP 1 Score: 141.7 bits (356), Expect = 4.2e-30
Identity = 82/129 (63.57%), Postives = 92/129 (71.32%), Query Frame = 0


Query: 1   MRRLAAAFAPPPLAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRF--- 60
           MRRLA   A PP    AA KLH W SPIPYLFGGL LTMLLIA ALI+LACS+RKRF   
Sbjct: 1   MRRLATEAARPP----AAAKLHLWNSPIPYLFGGLFLTMLLIAVALIILACSFRKRFFTG 60

Query: 61  -SGNSSEKEPPAAAPADVELVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALK 120
            S   S+K+PP A  + +ELVMEPKILV+MAGD  P FLATP  A   DVPRRC+CSA  
Sbjct: 61  HSSPGSQKDPPVAGSSTMELVMEPKILVVMAGDYTPMFLATPVAAGVGDVPRRCSCSA-S 120

Query: 121 QRDGDQNQN 126
           Q+D  QN +
Sbjct: 121 QQDDKQNHS 124

[Close]

BLAST of MS014546.1 vs. ExPASy Swiss-Prot
Match: Q8S8A0 (Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana OX=3702 GN=GDU4 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.6e-14
Identity = 47/88 (53.41%), Postives = 57/88 (64.77%), Query Frame = 0


Query: 19  PKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSY-RKRFSGNSS------EKEPPAAAP 78
           P + PW SP+PYLFGGL+  + LIA AL++LACSY R   SG+ S      EKE  +   
Sbjct: 28  PPISPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSTSGDDSGERVDEEKESRSGVK 87

Query: 79  ADVELVMEPKILVIMAGDDMPTFLATPA 100
           A      E K+LVIMAGDD+P FLATPA
Sbjct: 88  A-ASAACEEKVLVIMAGDDLPRFLATPA 114

[Close]

BLAST of MS014546.1 vs. ExPASy Swiss-Prot
Match: Q3E965 (Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana OX=3702 GN=GDU5 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 23  PWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRFSGNSSEKEPPAAAPADVELVMEPKI 82
           PW++P+PYLFGGL+  + LIA AL++LACSY +       E++   +    V    E KI
Sbjct: 27  PWRTPVPYLFGGLAAMLGLIAFALLLLACSYWRLSRQTEDEEKQTESGEKVVAKAFEEKI 86

Query: 83  LVIMAGDDMPTFLATPATAAAADVPRRCNCSALKQRDGDQNQN 126
           LVIMAG + PTFLATP  A         +C  +++++G   ++
Sbjct: 87  LVIMAGQNNPTFLATPVAAKIC-----LDCVNMEKKEGQNGES 124

[Close]

BLAST of MS014546.1 vs. ExPASy Swiss-Prot
Match: Q3EAV6 (Protein GLUTAMINE DUMPER 6 OS=Arabidopsis thaliana OX=3702 GN=GDU6 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 44/99 (44.44%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 19  PKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRK--RFSGNSSEKEPPAAAPADVEL 78
           PK+  WKSP+PYLFGGL L +LLIA AL+ L C+++K    S N+   E       D + 
Sbjct: 5   PKVEIWKSPVPYLFGGLFLLVLLIALALLSLVCTHQKPSSSSNNNHMDEEDDVGDKDAKP 64

Query: 79  VME---PKILVIMAGDDMPTFLATPATAAAADVPRRCNC 113
           +     PKI+VI+AGD+ PT LA P          RCNC
Sbjct: 65  ITREYLPKIVVILAGDNKPTCLAVPVVVPPPTSIFRCNC 103

[Close]

BLAST of MS014546.1 vs. ExPASy Swiss-Prot
Match: O81775 (Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana OX=3702 GN=GDU1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.0e-12
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 23  PWKSPIPYLFGGLSLTMLLIAGALIVLACSY-RKRFSG-----NSSEKEPPAAAPADVEL 82
           PW SP+PYLFGGL+  + LIA AL++LACSY R   SG     N  E++   +       
Sbjct: 29  PWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSSGEEDGQNVDEEKESRSGDKAANG 88

Query: 83  VMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNC 113
             E K LVIMAG+D+P +LATPA        ++C C
Sbjct: 89  AYEEKFLVIMAGEDLPRYLATPAM-------KKCTC 117

[Close]

BLAST of MS014546.1 vs. ExPASy Swiss-Prot
Match: Q9SW07 (Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana OX=3702 GN=GDU2 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.0e-12
Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 23  PWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRFSGNSSEKEPPAAAPADVE------- 82
           PW SP+PYLFGGL+  + LI  AL++LACSY  R SG S+E++  A   A  +       
Sbjct: 27  PWHSPVPYLFGGLAAMLALICVALLILACSY-WRLSG-SAERDLEAGDDAKPDNDTNKTK 86

Query: 83  -LVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALKQRDG 121
              M  K LVIMAGD  PT+LATPAT +     + C C    + +G
Sbjct: 87  HTEMPEKFLVIMAGDVRPTYLATPATRS----EQSCTCGDHNEEEG 126

[Close]

BLAST of MS014546.1 vs. ExPASy TrEMBL
Match: A0A6J1GBQ1 (protein GLUTAMINE DUMPER 6-like OS=Cucurbita moschata OX=3662 GN=LOC111452513 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-31
Identity = 82/123 (66.67%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 1   MRRLAAAFAPPPLAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRF--- 60
           MRRLA A APPP AA    KLH W SPIPYLFGGL LTMLLIA ALI+LACS+RKRF   
Sbjct: 1   MRRLATA-APPPTAA----KLHLWNSPIPYLFGGLFLTMLLIAVALIILACSFRKRFFTG 60

Query: 61  -SGNSSEKEPPAAAPADVELVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALK 120
            S   S+K+PP A  A +E VMEPKILV+MAG++ PTFLATPA AA  +VPRRC+C+A++
Sbjct: 61  HSSPGSQKDPPVAGSAAMEPVMEPKILVVMAGNNTPTFLATPAAAALGNVPRRCSCTAIQ 118

[Close]

BLAST of MS014546.1 vs. ExPASy TrEMBL
Match: A0A6J1KD18 (protein GLUTAMINE DUMPER 6-like OS=Cucurbita maxima OX=3661 GN=LOC111493228 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30
Identity = 82/129 (63.57%), Postives = 92/129 (71.32%), Query Frame = 0


Query: 1   MRRLAAAFAPPPLAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRF--- 60
           MRRLA   A PP    AA KLH W SPIPYLFGGL LTMLLIA ALI+LACS+RKRF   
Sbjct: 1   MRRLATEAARPP----AAAKLHLWNSPIPYLFGGLFLTMLLIAVALIILACSFRKRFFTG 60

Query: 61  -SGNSSEKEPPAAAPADVELVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALK 120
            S   S+K+PP A  + +ELVMEPKILV+MAGD  P FLATP  A   DVPRRC+CSA  
Sbjct: 61  HSSPGSQKDPPVAGSSTMELVMEPKILVVMAGDYTPMFLATPVAAGVGDVPRRCSCSA-S 120

Query: 121 QRDGDQNQN 126
           Q+D  QN +
Sbjct: 121 QQDDKQNHS 124

[Close]

BLAST of MS014546.1 vs. ExPASy TrEMBL
Match: A0A0A0KW00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G119770 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.5e-28
Identity = 80/126 (63.49%), Postives = 95/126 (75.40%), Query Frame = 0


Query: 1   MRRLAAAFAPPPLAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRFSGN 60
           MRRLAAA APP   +A A KLH WKSPIPYLFGGLSLT+LLIA ALI++ACS+RKRF+G 
Sbjct: 1   MRRLAAATAPP---SATALKLHLWKSPIPYLFGGLSLTLLLIAAALIIIACSFRKRFTG- 60

Query: 61  SSEKEPPAAAPADVELVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALKQRDG 120
             +K+PPAA  + V L+MEPK  VIMAG+DMPTFLA PA A    +P  C+CS  +Q   
Sbjct: 61  -GQKDPPAATSSTVNLLMEPKFFVIMAGNDMPTFLALPAAA----IP-PCSCSTNQQ--- 113

Query: 121 DQNQNP 127
           D +QNP
Sbjct: 121 DAHQNP 113

[Close]

BLAST of MS014546.1 vs. ExPASy TrEMBL
Match: A0A2N9GJ52 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30389 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.8e-17
Identity = 52/95 (54.74%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 13  LAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRFSGNSSEKEPPAAAPA 72
           +A+++A  +  WKSPIPYLFGGL+LT+LLIA ALI+L CSYRKR     S++E P A   
Sbjct: 1   MASSSASGVWLWKSPIPYLFGGLALTLLLIAVALIILVCSYRKR---TVSDEEKPPAKMM 60

Query: 73  DVELVMEPKILVIMAGDDMPTFLATPATAAAADVP 108
           +  +  EPKI+VIMAGDD PT+LA P T+ ++  P
Sbjct: 61  NTMVDTEPKIVVIMAGDDKPTYLAKPVTSTSSTCP 92

[Close]

BLAST of MS014546.1 vs. ExPASy TrEMBL
Match: A0A2N9GMM3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28744 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.2e-16
Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 13  LAAAAAPKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRFSGNSSEKEPPAAAPA 72
           +A+++A  +  WKSPIPYLFGGL+LT+LLIA ALI+L CSYRKR     S +E P     
Sbjct: 1   MASSSASGVRVWKSPIPYLFGGLALTLLLIAVALIILVCSYRKR---TVSNEEKPPTKMM 60

Query: 73  DVELVMEPKILVIMAGDDMPTFLATPATAAAADVP 108
           +  +  EPKI+VIMAGDD PT+LA P T+ ++  P
Sbjct: 61  NTMVDTEPKIVVIMAGDDKPTYLAKPVTSTSSTCP 92

[Close]

BLAST of MS014546.1 vs. TAIR 10
Match: AT2G24762.1 (glutamine dumper 4 )

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15
Identity = 47/88 (53.41%), Postives = 57/88 (64.77%), Query Frame = 0


Query: 19  PKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSY-RKRFSGNSS------EKEPPAAAP 78
           P + PW SP+PYLFGGL+  + LIA AL++LACSY R   SG+ S      EKE  +   
Sbjct: 28  PPISPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSTSGDDSGERVDEEKESRSGVK 87

Query: 79  ADVELVMEPKILVIMAGDDMPTFLATPA 100
           A      E K+LVIMAGDD+P FLATPA
Sbjct: 88  A-ASAACEEKVLVIMAGDDLPRFLATPA 114

[Close]

BLAST of MS014546.1 vs. TAIR 10
Match: AT3G30725.1 (glutamine dumper 6 )

HSP 1 Score: 74.3 bits (181), Expect = 7.7e-14
Identity = 44/99 (44.44%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 19  PKLHPWKSPIPYLFGGLSLTMLLIAGALIVLACSYRK--RFSGNSSEKEPPAAAPADVEL 78
           PK+  WKSP+PYLFGGL L +LLIA AL+ L C+++K    S N+   E       D + 
Sbjct: 5   PKVEIWKSPVPYLFGGLFLLVLLIALALLSLVCTHQKPSSSSNNNHMDEEDDVGDKDAKP 64

Query: 79  VME---PKILVIMAGDDMPTFLATPATAAAADVPRRCNC 113
           +     PKI+VI+AGD+ PT LA P          RCNC
Sbjct: 65  ITREYLPKIVVILAGDNKPTCLAVPVVVPPPTSIFRCNC 103

[Close]

BLAST of MS014546.1 vs. TAIR 10
Match: AT5G24920.1 (glutamine dumper 5 )

HSP 1 Score: 74.3 bits (181), Expect = 7.7e-14
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 23  PWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRFSGNSSEKEPPAAAPADVELVMEPKI 82
           PW++P+PYLFGGL+  + LIA AL++LACSY +       E++   +    V    E KI
Sbjct: 27  PWRTPVPYLFGGLAAMLGLIAFALLLLACSYWRLSRQTEDEEKQTESGEKVVAKAFEEKI 86

Query: 83  LVIMAGDDMPTFLATPATAAAADVPRRCNCSALKQRDGDQNQN 126
           LVIMAG + PTFLATP  A         +C  +++++G   ++
Sbjct: 87  LVIMAGQNNPTFLATPVAAKIC-----LDCVNMEKKEGQNGES 124

[Close]

BLAST of MS014546.1 vs. TAIR 10
Match: AT4G31730.1 (glutamine dumper 1 )

HSP 1 Score: 71.6 bits (174), Expect = 5.0e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 23  PWKSPIPYLFGGLSLTMLLIAGALIVLACSY-RKRFSG-----NSSEKEPPAAAPADVEL 82
           PW SP+PYLFGGL+  + LIA AL++LACSY R   SG     N  E++   +       
Sbjct: 29  PWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSSGEEDGQNVDEEKESRSGDKAANG 88

Query: 83  VMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNC 113
             E K LVIMAG+D+P +LATPA        ++C C
Sbjct: 89  AYEEKFLVIMAGEDLPRYLATPAM-------KKCTC 117

[Close]

BLAST of MS014546.1 vs. TAIR 10
Match: AT4G25760.1 (glutamine dumper 2 )

HSP 1 Score: 71.6 bits (174), Expect = 5.0e-13
Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 23  PWKSPIPYLFGGLSLTMLLIAGALIVLACSYRKRFSGNSSEKEPPAAAPADVE------- 82
           PW SP+PYLFGGL+  + LI  AL++LACSY  R SG S+E++  A   A  +       
Sbjct: 27  PWHSPVPYLFGGLAAMLALICVALLILACSY-WRLSG-SAERDLEAGDDAKPDNDTNKTK 86

Query: 83  -LVMEPKILVIMAGDDMPTFLATPATAAAADVPRRCNCSALKQRDG 121
              M  K LVIMAGD  PT+LATPAT +     + C C    + +G
Sbjct: 87  HTEMPEKFLVIMAGDVRPTYLATPATRS----EQSCTCGDHNEEEG 126

The following BLAST results are available for this feature:

BLAST of MS014546.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887934.1	1.3e-34	72.22	protein GLUTAMINE DUMPER 2-like [Benincasa hispida]	[more]
KAG6607088.1	1.0e-31	67.48	Protein GLUTAMINE DUMPER 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022949049.1	3.8e-31	66.67	protein GLUTAMINE DUMPER 6-like [Cucurbita moschata]	[more]
XP_023524592.1	2.5e-30	65.85	protein GLUTAMINE DUMPER 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998640.1	4.2e-30	63.57	protein GLUTAMINE DUMPER 6-like [Cucurbita maxima]	[more]

BLAST of MS014546.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8A0	2.6e-14	53.41	Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana OX=3702 GN=GDU4 PE=2 SV=1	[more]
Q3E965	1.1e-12	39.81	Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana OX=3702 GN=GDU5 PE=2 SV=2	[more]
Q3EAV6	1.1e-12	44.44	Protein GLUTAMINE DUMPER 6 OS=Arabidopsis thaliana OX=3702 GN=GDU6 PE=2 SV=1	[more]
O81775	7.0e-12	44.79	Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana OX=3702 GN=GDU1 PE=1 SV=1	[more]
Q9SW07	7.0e-12	44.34	Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana OX=3702 GN=GDU2 PE=2 SV=1	[more]

BLAST of MS014546.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBQ1	1.8e-31	66.67	protein GLUTAMINE DUMPER 6-like OS=Cucurbita moschata OX=3662 GN=LOC111452513 PE...	[more]
A0A6J1KD18	2.0e-30	63.57	protein GLUTAMINE DUMPER 6-like OS=Cucurbita maxima OX=3661 GN=LOC111493228 PE=3...	[more]
A0A0A0KW00	1.5e-28	63.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G119770 PE=3 SV=1	[more]
A0A2N9GJ52	9.8e-17	54.74	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30389 PE=3 SV=1	[more]
A0A2N9GMM3	2.2e-16	53.68	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28744 PE=3 SV=1	[more]

BLAST of MS014546.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24762.1	1.8e-15	53.41	glutamine dumper 4	[more]
AT3G30725.1	7.7e-14	44.44	glutamine dumper 6	[more]
AT5G24920.1	7.7e-14	39.81	glutamine dumper 5	[more]
AT4G31730.1	5.0e-13	44.79	glutamine dumper 1	[more]
AT4G25760.1	5.0e-13	44.34	glutamine dumper 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040359	Protein glutamine dumper	PANTHER	PTHR33228	PROTEIN GLUTAMINE DUMPER 4-RELATED	coord: 19..102
None	No IPR available	PANTHER	PTHR33228:SF50	PROTEIN GLUTAMINE DUMPER 6-LIKE	coord: 19..102

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS014546	MS014546	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS014546.1-cds	MS014546.1-cds-scaffold553:804527..804904	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS014546.1	MS014546.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080143	regulation of amino acid export