MS012938.1 (mRNA) Bitter gourd (TR) v1

Overview
NameMS012938.1
TypemRNA
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlipid transfer protein EARLI 1-like
Locationscaffold38: 712040 .. 712684 (+)
Sequence length645
RNA-Seq ExpressionMS012938.1
SyntenyMS012938.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTCCCAAAACCACAACCTCAATTGCTTTGTTCTTCTGTCTCAACCTTCTCTTCTTCTCCCTTGTCACTGCTTGTGGCACATGCTCTCACCCGGTAACAAGGCCAAAACCAAGCCCGGGTTCCAGTGGTCATCCAGGTTATGGTGGTAGCCCAGGGTCTGGTGGAAGCCCAGGGTCCGGGAGCAGCCCAGGCTCAGGGGGTGGTCCAGGTTCCGGGGGCAGCCCAGGCTCGGGGGGTAGTCCGGGCTCCGGGGGCAGCCCGGGCTCAGGGGGTAATCCAGGCTCCGGGGGCAGCCCGGGCTCAGGGGGCAATCCAGGCTCCGGAGGCAACCCGGGCTCAGGGGGCAACCCAGGCTCTGGAGGCAACCCGGGCTCAGGGGGTAACCCGGGCTCCGGAGGCAATCCTGGTTCCGGTGGCACTCCGGCAACTGGCGGAGCTAGTTGCCCTAGGGATGCTCTCAAGATAGGTGTGTGTGCTAGAGTGCTTAACATTGTTAATGCAACCATTGGCCGCCCACCAGTGACTCCATGCTGCAACTTAATTCAAGGGTTGGCAGACCTTGAAGCTGCTGTTTGTCTTTGCACTGCAATCAGAGCAAGCATTTTGGGCATCAATATAAACCTCCCAATTAATCTCAGC

mRNA sequence

ATGGCTTCTCCCAAAACCACAACCTCAATTGCTTTGTTCTTCTGTCTCAACCTTCTCTTCTTCTCCCTTGTCACTGCTTGTGGCACATGCTCTCACCCGGTAACAAGGCCAAAACCAAGCCCGGGTTCCAGTGGTCATCCAGGTTATGGTGGTAGCCCAGGGTCTGGTGGAAGCCCAGGGTCCGGGAGCAGCCCAGGCTCAGGGGGTGGTCCAGGTTCCGGGGGCAGCCCAGGCTCGGGGGGTAGTCCGGGCTCCGGGGGCAGCCCGGGCTCAGGGGGTAATCCAGGCTCCGGGGGCAGCCCGGGCTCAGGGGGCAATCCAGGCTCCGGAGGCAACCCGGGCTCAGGGGGCAACCCAGGCTCTGGAGGCAACCCGGGCTCAGGGGGTAACCCGGGCTCCGGAGGCAATCCTGGTTCCGGTGGCACTCCGGCAACTGGCGGAGCTAGTTGCCCTAGGGATGCTCTCAAGATAGGTGTGTGTGCTAGAGTGCTTAACATTGTTAATGCAACCATTGGCCGCCCACCAGTGACTCCATGCTGCAACTTAATTCAAGGGTTGGCAGACCTTGAAGCTGCTGTTTGTCTTTGCACTGCAATCAGAGCAAGCATTTTGGGCATCAATATAAACCTCCCAATTAATCTCAGC

Coding sequence (CDS)

ATGGCTTCTCCCAAAACCACAACCTCAATTGCTTTGTTCTTCTGTCTCAACCTTCTCTTCTTCTCCCTTGTCACTGCTTGTGGCACATGCTCTCACCCGGTAACAAGGCCAAAACCAAGCCCGGGTTCCAGTGGTCATCCAGGTTATGGTGGTAGCCCAGGGTCTGGTGGAAGCCCAGGGTCCGGGAGCAGCCCAGGCTCAGGGGGTGGTCCAGGTTCCGGGGGCAGCCCAGGCTCGGGGGGTAGTCCGGGCTCCGGGGGCAGCCCGGGCTCAGGGGGTAATCCAGGCTCCGGGGGCAGCCCGGGCTCAGGGGGCAATCCAGGCTCCGGAGGCAACCCGGGCTCAGGGGGCAACCCAGGCTCTGGAGGCAACCCGGGCTCAGGGGGTAACCCGGGCTCCGGAGGCAATCCTGGTTCCGGTGGCACTCCGGCAACTGGCGGAGCTAGTTGCCCTAGGGATGCTCTCAAGATAGGTGTGTGTGCTAGAGTGCTTAACATTGTTAATGCAACCATTGGCCGCCCACCAGTGACTCCATGCTGCAACTTAATTCAAGGGTTGGCAGACCTTGAAGCTGCTGTTTGTCTTTGCACTGCAATCAGAGCAAGCATTTTGGGCATCAATATAAACCTCCCAATTAATCTCAGC

Protein sequence

MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPGSGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPGSGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCCNLIQGLADLEAAVCLCTAIRASILGININLPINLS
Homology
BLAST of MS012938.1 vs. NCBI nr
Match: XP_022153977.1 (lipid transfer protein EARLI 1-like [Momordica charantia])

HSP 1 Score: 333.6 bits (854), Expect = 1.3e-87
Identity = 202/215 (93.95%), Postives = 202/215 (93.95%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSG PGYGGSPGSGGSPG
Sbjct: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGRPGYGGSPGSGGSPG 60

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
           SGSSPGSGGGPGSGGSPGSGGS            PGSGGSPGSGGNPGSGGNPGSGGNPG
Sbjct: 61  SGSSPGSGGGPGSGGSPGSGGS------------PGSGGSPGSGGNPGSGGNPGSGGNPG 120

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180
           SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC
Sbjct: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180

Query: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
           NLIQGLADLEAAVCLCTAIRASILGININLPINLS
Sbjct: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 203

BLAST of MS012938.1 vs. NCBI nr
Match: XP_031737657.1 (pEARLI1-like lipid transfer protein 3 [Cucumis sativus] >KAE8650066.1 hypothetical protein Csa_011283 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 4.3e-75
Identity = 180/215 (83.72%), Postives = 193/215 (89.77%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           MASPKTTTSIALFFCLNLLFFSLVTACG+CSHPVTRPKPSP   GHPG+GGSPGSG SPG
Sbjct: 25  MASPKTTTSIALFFCLNLLFFSLVTACGSCSHPVTRPKPSPSFGGHPGHGGSPGSGSSPG 84

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
           SG SPGSGG PG+GGSPGSGGSPGSGGSPGSGG+PGSGGSPGSGG+PGSGG PGSGG+PG
Sbjct: 85  SGGSPGSGGSPGAGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGTPGSGGSPG 144

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180
           SGG P    +PGSGGN      P TGG +CPRDALKIG+CARVL++VNATIG PPVTPCC
Sbjct: 145 SGGTP----SPGSGGN-----NPGTGGGTCPRDALKIGICARVLSLVNATIGSPPVTPCC 204

Query: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
            LIQGLADLEAA+CLCTAIRASILG+NINLPINLS
Sbjct: 205 TLIQGLADLEAAICLCTAIRASILGLNINLPINLS 230

BLAST of MS012938.1 vs. NCBI nr
Match: XP_008448870.1 (PREDICTED: lipid transfer protein EARLI 1-like [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 4.4e-72
Identity = 169/215 (78.60%), Postives = 184/215 (85.58%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           MASPKTTTSIALFFCLN+LFFSLVTACG+CSHP+TRPKP+PGS GHPGYGG PGSGGSPG
Sbjct: 1   MASPKTTTSIALFFCLNILFFSLVTACGSCSHPITRPKPNPGSGGHPGYGGGPGSGGSPG 60

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
           SG SPGSGG PGSGGSPGSGGSPGSGGSPGSGG+PGSGGSPGSGG+PGSGGNPG      
Sbjct: 61  SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGNPG------ 120

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180
                           PGSGG  +TGG +CPRDALKIGVCARVL+IVN T+G PPVTPCC
Sbjct: 121 ----------------PGSGGNSSTGGGTCPRDALKIGVCARVLSIVNVTLGTPPVTPCC 180

Query: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
           +LIQGLADLEAA+CLCTAIRA+ILG+NI+LPINLS
Sbjct: 181 SLIQGLADLEAAICLCTAIRANILGLNISLPINLS 193

BLAST of MS012938.1 vs. NCBI nr
Match: TYK12009.1 (lipid transfer protein EARLI 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 271.6 bits (693), Expect = 6.0e-69
Identity = 165/215 (76.74%), Postives = 180/215 (83.72%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           MASPKTTTSIALFFCLN+LFFSLVTACG+CSHP+TRPKP+PGS GHPGYGG PGSGG   
Sbjct: 1   MASPKTTTSIALFFCLNILFFSLVTACGSCSHPITRPKPNPGSRGHPGYGGGPGSGG--- 60

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
              SPGSGGGPGSGGSPGSGGSPGSGGSPGSGG+PGSGGSPGSGG+PGSGGNPG      
Sbjct: 61  ---SPGSGGGPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGNPG------ 120

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180
                           PGSGG  +TGG +CPRDALKIGVCARVL+IVN T+G PPVTPCC
Sbjct: 121 ----------------PGSGGNSSTGGGTCPRDALKIGVCARVLSIVNVTLGTPPVTPCC 180

Query: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
           +LIQGLADLEAA+CLCTAIRA+ILG+NI+LPINLS
Sbjct: 181 SLIQGLADLEAAICLCTAIRANILGLNISLPINLS 187

BLAST of MS012938.1 vs. NCBI nr
Match: XP_038903682.1 (14 kDa proline-rich protein DC2.15-like [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 7.1e-62
Identity = 152/215 (70.70%), Postives = 161/215 (74.88%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           M+SPKTTTSIALFFCLNLLFFSLVTACG+CSHP+TRP+PSPGS G PGYGGSPGSGGSPG
Sbjct: 1   MSSPKTTTSIALFFCLNLLFFSLVTACGSCSHPITRPRPSPGSGGQPGYGGSPGSGGSPG 60

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
           SG SPGSGG PGSGGSPGSGGSPGSGGSPGSGGN                          
Sbjct: 61  SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGN-------------------------- 120

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180
                          NPG      TGG +CPRDA+KIGVCARVLN+VNATIG PPVTPCC
Sbjct: 121 ---------------NPG------TGGGTCPRDAVKIGVCARVLNLVNATIGTPPVTPCC 168

Query: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
            LIQGLADLEAA+CLCTAIRASILG+NINLPINLS
Sbjct: 181 TLIQGLADLEAAICLCTAIRASILGLNINLPINLS 168

BLAST of MS012938.1 vs. ExPASy Swiss-Prot
Match: Q9S7I2 (Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.8e-22
Identity = 53/75 (70.67%), Postives = 65/75 (86.67%), Query Frame = 0

Query: 142 TPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCCNLIQGLADLEAAVCLCTAIRA 201
           T AT G +CP+++++IG C  VLN+V+ T+G PPV PCC+LIQGLADLEAAVCLCTA++A
Sbjct: 21  TSATTG-TCPKNSIEIGTCVTVLNLVDLTLGNPPVKPCCSLIQGLADLEAAVCLCTAVKA 80

Query: 202 SILGI-NINLPINLS 216
           SILGI NINLPINLS
Sbjct: 81  SILGIVNINLPINLS 94

BLAST of MS012938.1 vs. ExPASy Swiss-Prot
Match: P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 50/75 (66.67%), Postives = 59/75 (78.67%), Query Frame = 0

Query: 142 TPATGGASCPRDALKIGVCARVLNIV-NATIGRPPVTPCCNLIQGLADLEAAVCLCTAIR 201
           TP      CPRDALK+GVCA VLN+V N  IG PP  PCC+L++GL +LEAAVCLCTAI+
Sbjct: 46  TPYPSAGKCPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIK 105

Query: 202 ASILGININLPINLS 216
           A+ILG N+NLPI LS
Sbjct: 106 ANILGKNLNLPIALS 120

BLAST of MS012938.1 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.3e-13
Identity = 81/218 (37.16%), Postives = 103/218 (47.25%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTA--CGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGS 60
           MAS K + SIALFF LN++FF+L  A  CG    P  +P PSP     P     P    S
Sbjct: 1   MAS-KNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPS 60

Query: 61  PGSGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGN 120
             S S P                      SP    NP     P +               
Sbjct: 61  VPSPSVP----------------------SP----NPRPVTPPRT--------------- 120

Query: 121 PGSGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVL-NIVNATIGRPPVT 180
                       PGS GN             CP DAL++GVCA VL +++N  +G+P   
Sbjct: 121 ------------PGSSGN-------------CPIDALRLGVCANVLSSLLNIQLGQPSAQ 151

Query: 181 PCCNLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
           PCC+LIQGL DL+AA+CLCTA+RA++LGIN+N+PI+LS
Sbjct: 181 PCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLS 151

BLAST of MS012938.1 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 76/216 (35.19%), Postives = 98/216 (45.37%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           MAS K + S+ALFF LN+LFF+L  A      P  +PKP P     P     P     P 
Sbjct: 1   MAS-KNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVP- 60

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
                                      SP    NP     P +                 
Sbjct: 61  ---------------------------SP----NPRPVTPPRT----------------- 120

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVL-NIVNATIGRPPVTPC 180
                     PGS GN            SCP DALK+GVCA VL +++N  +G+P    C
Sbjct: 121 ----------PGSSGN------------SCPIDALKLGVCANVLSSLLNIQLGQPSSQQC 144

Query: 181 CNLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
           C+LIQGL D++AA+CLCTA+RA++LGIN+N+PI+LS
Sbjct: 181 CSLIQGLVDVDAAICLCTALRANVLGINLNVPISLS 144

BLAST of MS012938.1 vs. ExPASy Swiss-Prot
Match: Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.6e-10
Identity = 86/220 (39.09%), Postives = 109/220 (49.55%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTA----CGTCSHPVTRPKPSPGSSGHPGYGGSPGSG 60
           MAS K +TS+ALFF LN+LFF+L TA    C     P T P P   S  +P    SP   
Sbjct: 1   MAS-KNSTSLALFFALNILFFTLTTATDCRCNLSPKPRTVPSPKVPSPKYP----SP--- 60

Query: 61  GSPGSGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSG 120
            S  S S P       S  +P       S  SP    NP     P +             
Sbjct: 61  -SIPSPSVPTPSVPTPSVPTP-------SVPSP----NPTPVTPPRT------------- 120

Query: 121 GNPGSGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLN-IVNATIGRPP 180
                         PGS GN             CP DAL++GVCA VL+ ++N  +G+P 
Sbjct: 121 --------------PGSSGN-------------CPIDALRLGVCANVLSGLLNVQLGQPS 160

Query: 181 VTPCCNLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
             PCC+LIQGL DL+AA+CLCTA+RA++LGIN+N+PI+LS
Sbjct: 181 AQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLS 160

BLAST of MS012938.1 vs. ExPASy TrEMBL
Match: A0A6J1DKF1 (lipid transfer protein EARLI 1-like OS=Momordica charantia OX=3673 GN=LOC111021354 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.2e-88
Identity = 202/215 (93.95%), Postives = 202/215 (93.95%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSG PGYGGSPGSGGSPG
Sbjct: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGRPGYGGSPGSGGSPG 60

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
           SGSSPGSGGGPGSGGSPGSGGS            PGSGGSPGSGGNPGSGGNPGSGGNPG
Sbjct: 61  SGSSPGSGGGPGSGGSPGSGGS------------PGSGGSPGSGGNPGSGGNPGSGGNPG 120

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180
           SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC
Sbjct: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180

Query: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
           NLIQGLADLEAAVCLCTAIRASILGININLPINLS
Sbjct: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 203

BLAST of MS012938.1 vs. ExPASy TrEMBL
Match: A0A1S3BLL6 (lipid transfer protein EARLI 1-like OS=Cucumis melo OX=3656 GN=LOC103490903 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.2e-72
Identity = 169/215 (78.60%), Postives = 184/215 (85.58%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           MASPKTTTSIALFFCLN+LFFSLVTACG+CSHP+TRPKP+PGS GHPGYGG PGSGGSPG
Sbjct: 1   MASPKTTTSIALFFCLNILFFSLVTACGSCSHPITRPKPNPGSGGHPGYGGGPGSGGSPG 60

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
           SG SPGSGG PGSGGSPGSGGSPGSGGSPGSGG+PGSGGSPGSGG+PGSGGNPG      
Sbjct: 61  SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGNPG------ 120

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180
                           PGSGG  +TGG +CPRDALKIGVCARVL+IVN T+G PPVTPCC
Sbjct: 121 ----------------PGSGGNSSTGGGTCPRDALKIGVCARVLSIVNVTLGTPPVTPCC 180

Query: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
           +LIQGLADLEAA+CLCTAIRA+ILG+NI+LPINLS
Sbjct: 181 SLIQGLADLEAAICLCTAIRANILGLNISLPINLS 193

BLAST of MS012938.1 vs. ExPASy TrEMBL
Match: A0A5D3CP01 (Lipid transfer protein EARLI 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00170 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.9e-69
Identity = 165/215 (76.74%), Postives = 180/215 (83.72%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           MASPKTTTSIALFFCLN+LFFSLVTACG+CSHP+TRPKP+PGS GHPGYGG PGSGG   
Sbjct: 1   MASPKTTTSIALFFCLNILFFSLVTACGSCSHPITRPKPNPGSRGHPGYGGGPGSGG--- 60

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
              SPGSGGGPGSGGSPGSGGSPGSGGSPGSGG+PGSGGSPGSGG+PGSGGNPG      
Sbjct: 61  ---SPGSGGGPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGNPG------ 120

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180
                           PGSGG  +TGG +CPRDALKIGVCARVL+IVN T+G PPVTPCC
Sbjct: 121 ----------------PGSGGNSSTGGGTCPRDALKIGVCARVLSIVNVTLGTPPVTPCC 180

Query: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
           +LIQGLADLEAA+CLCTAIRA+ILG+NI+LPINLS
Sbjct: 181 SLIQGLADLEAAICLCTAIRANILGLNISLPINLS 187

BLAST of MS012938.1 vs. ExPASy TrEMBL
Match: A0A0A0L1L2 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G026160 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.8e-66
Identity = 185/324 (57.10%), Postives = 207/324 (63.89%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGS----- 60
           MASPKTTTSIALFFCLNLLFFSLVTACG+CSHPVTRPKPSP   GHPG+GGSPGS     
Sbjct: 25  MASPKTTTSIALFFCLNLLFFSLVTACGSCSHPVTRPKPSPSFGGHPGHGGSPGSGSSPG 84

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 85  SGGSPGSGGSPGAGGSPGSGGSPGAGGGSGGSPGSGGSPGSGGSPGAGGSPGSGGSPGAG 144

Query: 121 -----------------------------------GGSPGSGSSPGSGGGPGSGGSPGSG 180
                                              GGSPGSG SPG+GG PGSGGSPG+G
Sbjct: 145 GSPGSGGSPGAGGSPGSGGSPGAGGSPGSGGSPGAGGSPGSGGSPGAGGSPGSGGSPGAG 204

Query: 181 GSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPGSGGNPGSGGNPGSGGNPGSG 216
           GSPGSGGSPG+GG+PGSGGSPG+GG+PGSGG+PG+GG+PGSGG+PG+GG+PGSGG+PGSG
Sbjct: 205 GSPGSGGSPGAGGSPGSGGSPGAGGSPGSGGSPGAGGSPGSGGSPGAGGSPGSGGSPGSG 264

BLAST of MS012938.1 vs. ExPASy TrEMBL
Match: A0A6J1KVB3 (pEARLI1-like lipid transfer protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498509 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61
Identity = 158/215 (73.49%), Postives = 172/215 (80.00%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           MAS KTTTSIALFF LNLLFFSL  ACG+CSHP+ RP+P                     
Sbjct: 1   MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRP--------------------- 60

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
                     P SGGSPGSGGSPGSGGSPGSGG+PGSGGSPGSGG+PGSGG+PGSGG+PG
Sbjct: 61  ----------PHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPG 120

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCC 180
           SGG+PGSGG+PGSGG+PG+ G+P TGG +CPRDALKIGVCARVL +VNATIG PPVTPCC
Sbjct: 121 SGGSPGSGGSPGSGGSPGT-GSPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCC 180

Query: 181 NLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
            LIQGLADLEAAVCLCTAIRASILGININLPINLS
Sbjct: 181 TLIQGLADLEAAVCLCTAIRASILGININLPINLS 183

BLAST of MS012938.1 vs. TAIR 10
Match: AT4G12550.1 (Auxin-Induced in Root cultures 1 )

HSP 1 Score: 105.1 bits (261), Expect = 6.9e-23
Identity = 53/75 (70.67%), Postives = 65/75 (86.67%), Query Frame = 0

Query: 142 TPATGGASCPRDALKIGVCARVLNIVNATIGRPPVTPCCNLIQGLADLEAAVCLCTAIRA 201
           T AT G +CP+++++IG C  VLN+V+ T+G PPV PCC+LIQGLADLEAAVCLCTA++A
Sbjct: 21  TSATTG-TCPKNSIEIGTCVTVLNLVDLTLGNPPVKPCCSLIQGLADLEAAVCLCTAVKA 80

Query: 202 SILGI-NINLPINLS 216
           SILGI NINLPINLS
Sbjct: 81  SILGIVNINLPINLS 94

BLAST of MS012938.1 vs. TAIR 10
Match: AT1G62510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 77/216 (35.65%), Postives = 97/216 (44.91%), Query Frame = 0

Query: 1   MASPKTTTSIALFFCLNLLFFSLVTACGTCSHPVTRPKPSPGSSGHPGYGGSPGSGGSPG 60
           MAS +TT S+ALF  LN LFF+ ++ACG C  P  +PK  P  S  P             
Sbjct: 1   MAS-RTTKSLALFLILNFLFFTTISACGNCGCPSPKPKHKPSPSPKP------------- 60

Query: 61  SGSSPGSGGGPGSGGSPGSGGSPGSGGSPGSGGNPGSGGSPGSGGNPGSGGNPGSGGNPG 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 SGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLN-IVNATIGRPPVTPC 180
                     P     P    +P+   A CPRDALK+GVCA VLN ++N T+G+PPV PC
Sbjct: 121 ---------KPNPKPKPTPHPSPSPAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPC 133

Query: 181 CNLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
           C LIQGLADLEAA CLCTA++A+ILGIN+N+P++LS
Sbjct: 181 CTLIQGLADLEAAACLCTALKANILGINLNIPLSLS 133

BLAST of MS012938.1 vs. TAIR 10
Match: AT2G45180.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 43/67 (64.18%), Postives = 58/67 (86.57%), Query Frame = 0

Query: 149 SCPRDALKIGVCARVLNIVNATIGRPPVTPCCNLIQGLADLEAAVCLCTAIRASILGINI 208
           +CP D LK+GVCA +L +VN  +G PP TPCC L+QGLA+LEAAVCLCTA++A++LGIN+
Sbjct: 51  TCPTDTLKLGVCADLLGLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLGINL 110

Query: 209 NLPINLS 216
           N+PI+L+
Sbjct: 111 NVPIDLT 117

BLAST of MS012938.1 vs. TAIR 10
Match: AT4G22460.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0

Query: 131 PGSGGNPGSGGTPATGGASCPRDALKIGVCARVLNIVNA-TIGRPPVTPCCNLIQGLADL 190
           PG         TP TG  +CP+DALK+GVC   LN++N  T G PPVTPCC+LI+GL DL
Sbjct: 33  PGKHNKQKPSPTPTTG--TCPKDALKVGVCVNALNLLNGLTPGTPPVTPCCSLIEGLVDL 92

Query: 191 EAAVCLCTAIRASILGININLPINLS 216
           EAA+CLCTA++AS+LGIN+ LPINLS
Sbjct: 93  EAAICLCTALKASVLGINLTLPINLS 116

BLAST of MS012938.1 vs. TAIR 10
Match: AT1G12090.1 (extensin-like protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-20
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 0

Query: 119 PGSGGNPGSGGNPGSGGNPGSGGTPATGGASCPRDALKIGVCARVLN-IVNATIGRPPVT 178
           P  GG P     P     P    +P++G + CP+D LK+GVCA VLN +++ T+G+PPV 
Sbjct: 28  PCGGGCPSPKPKP----TPKPTPSPSSGSSKCPKDTLKLGVCANVLNGLLDLTLGKPPVE 87

Query: 179 PCCNLIQGLADLEAAVCLCTAIRASILGININLPINLS 216
           PCC+LIQGLAD+EAAVCLCTA++A+ILGIN+NLPI+LS
Sbjct: 88  PCCSLIQGLADVEAAVCLCTALKANILGINLNLPISLS 121


HSP 2 Score: 39.7 bits (91), Expect = 3.6e-03
Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 0

Query: 7  TTSIALFFCLNLLFFSLVTACGTCSH-----PVTRPKPSPGSSGHPGYGGS 53
          ++SIALF  LNLLFF+ ++ACG+C+      P  +PKP+P  +  P  G S
Sbjct: 3  SSSIALFLALNLLFFTTISACGSCTPCGGGCPSPKPKPTPKPTPSPSSGSS 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022153977.11.3e-8793.95lipid transfer protein EARLI 1-like [Momordica charantia][more]
XP_031737657.14.3e-7583.72pEARLI1-like lipid transfer protein 3 [Cucumis sativus] >KAE8650066.1 hypothetic... [more]
XP_008448870.14.4e-7278.60PREDICTED: lipid transfer protein EARLI 1-like [Cucumis melo][more]
TYK12009.16.0e-6976.74lipid transfer protein EARLI 1-like [Cucumis melo var. makuwa][more]
XP_038903682.17.1e-6270.7014 kDa proline-rich protein DC2.15-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q9S7I29.8e-2270.67Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2... [more]
P140091.4e-2066.6714 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1[more]
Q391766.3e-1337.16Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV... [more]
Q9SU351.8e-1235.19pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE... [more]
Q9SU338.6e-1039.09pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125... [more]
Match NameE-valueIdentityDescription
A0A6J1DKF16.2e-8893.95lipid transfer protein EARLI 1-like OS=Momordica charantia OX=3673 GN=LOC1110213... [more]
A0A1S3BLL62.2e-7278.60lipid transfer protein EARLI 1-like OS=Cucumis melo OX=3656 GN=LOC103490903 PE=3... [more]
A0A5D3CP012.9e-6976.74Lipid transfer protein EARLI 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A0A0L1L21.8e-6657.10AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G026160 PE=3 SV... [more]
A0A6J1KVB31.3e-6173.49pEARLI1-like lipid transfer protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=... [more]
Match NameE-valueIdentityDescription
AT4G12550.16.9e-2370.67Auxin-Induced in Root cultures 1 [more]
AT1G62510.11.2e-2235.65Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G45180.11.3e-2164.18Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT4G22460.11.3e-2161.63Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G12090.11.9e-2057.14extensin-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027923Hydrophobic seed protein domainPFAMPF14547Hydrophob_seedcoord: 150..214
e-value: 3.8E-19
score: 68.7
IPR027923Hydrophobic seed protein domainCDDcd01958HPS_likecoord: 147..215
e-value: 1.97987E-23
score: 87.7692
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 149..215
e-value: 3.2E-19
score: 70.5
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 152..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..148
NoneNo IPR availablePANTHERPTHR31731FAMILY NOT NAMEDcoord: 5..215
NoneNo IPR availablePANTHERPTHR31731:SF82HYPRP2coord: 5..215
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: 5.0

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MS012938MS012938gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MS012938.1-cdsMS012938.1-cds-scaffold38:712040..712684CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MS012938.1MS012938.1-proteinpolypeptide