MS008023.1 (mRNA) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATTTACTGTAGGGTCCATCTTTTTGTTCACCATAGGAGGACTCACTAGAATAGTCCCGGCAAATTTAGGGATAGACATTGCTCTATGTGATACTTATTATGTGGTTGCACATTTCCATTATGTACTTCCTATGTGAGCCGTTTTTGCTTTATTTGCAGGATGTAGAAACTAATCACTATTGGGTGGGTAAAATCTTTTGTCGGACATACCCTGAAACTTTAGGTCAAATCCATTTTTGGATCACTTTTTTCGGGGTTAATCCGACCCTCTTTCCCATGCATTTCTTAGGGCTTTCGGGTATGCCACGTCGCATTCCTGATTATCCATATGCTTACGCTAGATGGAAT ATGTTATTTACTGTAGGGTCCATCTTTTTGTTCACCATAGGAGGACTCACTAGAATAGTCCCGGCAAATTTAGGGATAGACATTGCTCTATGTGATACTTATTATGTGGTTGCACATTTCCATTATGTACTTCCTATGCCGTTTTTGCTTTATTTGCAGGATGTAGAAACTAATCACTATTGGGTGGGTAAAATCTTTTGTCGGACATACCCTGAAACTTTAGGTCAAATCCATTTTTGGATCACTTTTTTCGGGGTTAATCCGACCCTCTTTCCCATGCATTTCTTAGGGCTTTCGGGTATGCCACGTCGCATTCCTGATTATCCATATGCTTACGCTAGATGGAAT ATGTTATTTACTGTAGGGTCCATCTTTTTGTTCACCATAGGAGGACTCACTAGAATAGTCCCGGCAAATTTAGGGATAGACATTGCTCTATGTGATACTTATTATGTGGTTGCACATTTCCATTATGTACTTCCTATGCCGTTTTTGCTTTATTTGCAGGATGTAGAAACTAATCACTATTGGGTGGGTAAAATCTTTTGTCGGACATACCCTGAAACTTTAGGTCAAATCCATTTTTGGATCACTTTTTTCGGGGTTAATCCGACCCTCTTTCCCATGCATTTCTTAGGGCTTTCGGGTATGCCACGTCGCATTCCTGATTATCCATATGCTTACGCTAGATGGAAT MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPYAYARWN Homology
BLAST of MS008023.1 vs. NCBI nr
Match: AAF77684.1 (cytochrome oxidase subunit 1, partial [Sarcandra grandifolia]) HSP 1 Score: 191.8 bits (486), Expect = 3.3e-45 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MS008023.1 vs. NCBI nr
Match: ABY66627.1 (cytochrome oxidase subunit I, partial [Echinocystis lobata]) HSP 1 Score: 191.8 bits (486), Expect = 3.3e-45 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MS008023.1 vs. NCBI nr
Match: YP_009913642.1 (cytochrome c oxidase subunit 1 [Luffa acutangula] >QLM02677.1 cytochrome c oxidase subunit 1 [Luffa acutangula]) HSP 1 Score: 191.8 bits (486), Expect = 3.3e-45 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MS008023.1 vs. NCBI nr
Match: ABY83868.1 (cytochrome oxidase subunit 1, partial [Citrullus lanatus subsp. vulgaris]) HSP 1 Score: 191.8 bits (486), Expect = 3.3e-45 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MS008023.1 vs. NCBI nr
Match: ABY83874.1 (cytochrome oxidase subunit 1, partial [Neoachmandra indica]) HSP 1 Score: 191.8 bits (486), Expect = 3.3e-45 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MS008023.1 vs. ExPASy Swiss-Prot
Match: P12786 (Cytochrome c oxidase subunit 1 OS=Pisum sativum OX=3888 GN=COX1 PE=3 SV=2) HSP 1 Score: 184.1 bits (466), Expect = 8.9e-46 Identity = 93/116 (80.17%), Postives = 96/116 (82.76%), Query Frame = 0
BLAST of MS008023.1 vs. ExPASy Swiss-Prot
Match: P07506 (Cytochrome c oxidase subunit 1 OS=Glycine max OX=3847 GN=COX1 PE=3 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 4.4e-45 Identity = 93/116 (80.17%), Postives = 95/116 (81.90%), Query Frame = 0
BLAST of MS008023.1 vs. ExPASy Swiss-Prot
Match: P68540 (Cytochrome c oxidase subunit 1 OS=Aegilops columnaris OX=4493 GN=COX1 PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 6.4e-44 Identity = 91/116 (78.45%), Postives = 94/116 (81.03%), Query Frame = 0
BLAST of MS008023.1 vs. ExPASy Swiss-Prot
Match: P60620 (Cytochrome c oxidase subunit 1 OS=Arabidopsis thaliana OX=3702 GN=COX1 PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 6.4e-44 Identity = 91/116 (78.45%), Postives = 94/116 (81.03%), Query Frame = 0
BLAST of MS008023.1 vs. ExPASy Swiss-Prot
Match: P08742 (Cytochrome c oxidase subunit 1 OS=Zea mays OX=4577 GN=COX1 PE=3 SV=2) HSP 1 Score: 177.9 bits (450), Expect = 6.4e-44 Identity = 91/116 (78.45%), Postives = 94/116 (81.03%), Query Frame = 0
BLAST of MS008023.1 vs. ExPASy TrEMBL
Match: B4XVS1 (Cytochrome c oxidase subunit 1 (Fragment) OS=Luffa acutangula OX=56866 GN=cox1 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MS008023.1 vs. ExPASy TrEMBL
Match: A0A7D6J6S5 (Cytochrome c oxidase subunit 1 OS=Luffa acutangula OX=56866 GN=cox1 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MS008023.1 vs. ExPASy TrEMBL
Match: A0A5A7UCF6 (Cytochrome c oxidase subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48743G00030 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MS008023.1 vs. ExPASy TrEMBL
Match: B0FA80 (Cytochrome c oxidase subunit 1 (Fragment) OS=Echinocystis lobata OX=252533 GN=coxI PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MS008023.1 vs. ExPASy TrEMBL
Match: G3EU24 (Cytochrome c oxidase subunit 1 OS=Cucumis melo subsp. melo OX=412675 GN=cox1 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MS008023.1 vs. TAIR 10
Match: ATMG01360.1 (cytochrome oxidase ) HSP 1 Score: 177.9 bits (450), Expect = 4.5e-45 Identity = 91/116 (78.45%), Postives = 94/116 (81.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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