
MS006379.1 (mRNA) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCATCTACAATTAAAAAACTGAGGCAAGCAGCGCGAGAAGCTTTGGAGGAGGTGGAACGAACTGTGGAGGTGGAAGATAGCCATAAATCCCTCAAAGATTTAGAGCGCCTTTGTGGATTTCCCATACCTTCCTGTGATGGATTCCTCGACACCATGCACTTCTATGGTTTATATTTGAAGAATGAC CCATCTACAATTAAAAAACTGAGGCAAGCAGCGCGAGAAGCTTTGGAGGAGGTGGAACGAACTGTGGAGGTGGAAGATAGCCATAAATCCCTCAAAGATTTAGAGCGCCTTTGTGGATTTCCCATACCTTCCTGTGATGGATTCCTCGACACCATGCACTTCTATGGTTTATATTTGAAGAATGAC CCATCTACAATTAAAAAACTGAGGCAAGCAGCGCGAGAAGCTTTGGAGGAGGTGGAACGAACTGTGGAGGTGGAAGATAGCCATAAATCCCTCAAAGATTTAGAGCGCCTTTGTGGATTTCCCATACCTTCCTGTGATGGATTCCTCGACACCATGCACTTCTATGGTTTATATTTGAAGAATGAC PSTIKKLRQAAREALEEVERTVEVEDSHKSLKDLERLCGFPIPSCDGFLDTMHFYGLYLKND Homology
BLAST of MS006379.1 vs. NCBI nr
Match: KAA0061663.1 (transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]) HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14 Identity = 40/61 (65.57%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of MS006379.1 vs. NCBI nr
Match: KAG6571342.1 (hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 79.7 bits (195), Expect = 9.7e-12 Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = 0
BLAST of MS006379.1 vs. ExPASy TrEMBL
Match: A0A5D3DC97 (Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00060 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 5.9e-15 Identity = 40/61 (65.57%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of MS006379.1 vs. ExPASy TrEMBL
Match: A0A0A0KGL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421730 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.7e-14 Identity = 39/60 (65.00%), Postives = 54/60 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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