MS002987.1 (mRNA) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTGTTTTCCTTGTTTCGATTCGAGGGAGGAGGAGAAGCTGAATCCTGAAAAGGAAAGCGACGATGGCAAGCAAGACCATCCAATGGTTCCACCCAACATTTCCAAGTTTCCTTCCGGT ATGGGTTGTTTTCCTTGTTTCGATTCGAGGGAGGAGGAGAAGCTGAATCCTGAAAAGGAAAGCGACGATGGCAAGCAAGACCATCCAATGGTTCCACCCAACATTTCCAAGTTTCCTTCCGGT ATGGGTTGTTTTCCTTGTTTCGATTCGAGGGAGGAGGAGAAGCTGAATCCTGAAAAGGAAAGCGACGATGGCAAGCAAGACCATCCAATGGTTCCACCCAACATTTCCAAGTTTCCTTCCGGT MGCFPCFDSREEEKLNPEKESDDGKQDHPMVPPNISKFPSG Homology
BLAST of MS002987.1 vs. NCBI nr
Match: XP_022148921.1 (serine/threonine-protein kinase PBS1 [Momordica charantia]) HSP 1 Score: 92.4 bits (228), Expect = 9.5e-16 Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of MS002987.1 vs. NCBI nr
Match: XP_008459890.1 (PREDICTED: serine/threonine-protein kinase PBS1 [Cucumis melo] >KAA0039839.1 serine/threonine-protein kinase PBS1 [Cucumis melo var. makuwa] >TYK24660.1 serine/threonine-protein kinase PBS1 [Cucumis melo var. makuwa]) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of MS002987.1 vs. NCBI nr
Match: XP_038874380.1 (serine/threonine-protein kinase PBS1 [Benincasa hispida]) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of MS002987.1 vs. NCBI nr
Match: XP_004140546.1 (serine/threonine-protein kinase PBS1 [Cucumis sativus] >KGN46431.1 hypothetical protein Csa_005008 [Cucumis sativus]) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of MS002987.1 vs. NCBI nr
Match: KAG7014635.1 (Serine/threonine-protein kinase PBS1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 86.3 bits (212), Expect = 6.8e-14 Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of MS002987.1 vs. ExPASy Swiss-Prot
Match: Q9FE20 (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana OX=3702 GN=PBS1 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 4.2e-06 Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of MS002987.1 vs. ExPASy TrEMBL
Match: A0A6J1D6T7 (serine/threonine-protein kinase PBS1 OS=Momordica charantia OX=3673 GN=LOC111017471 PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.6e-16 Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of MS002987.1 vs. ExPASy TrEMBL
Match: A0A5D3DN08 (Serine/threonine-protein kinase PBS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002100 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.1e-15 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of MS002987.1 vs. ExPASy TrEMBL
Match: A0A0A0KFA2 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G092530 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.1e-15 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of MS002987.1 vs. ExPASy TrEMBL
Match: A0A1S3CCG0 (serine/threonine-protein kinase PBS1 OS=Cucumis melo OX=3656 GN=LOC103498873 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.1e-15 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of MS002987.1 vs. ExPASy TrEMBL
Match: A0A6J1JW09 (serine/threonine-protein kinase PBS1-like OS=Cucurbita maxima OX=3661 GN=LOC111488023 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.3e-14 Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of MS002987.1 vs. TAIR 10
Match: AT5G13160.1 (Protein kinase superfamily protein ) HSP 1 Score: 50.8 bits (120), Expect = 3.0e-07 Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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