MELO3C034568.1 (mRNA) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTCCCAAGCTAGGAATTTGATAAAAAAAAAGTAGATAGAGGAAAAAATGGGTTTGATATCAAACTTTGTGACATTATTACCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGTACGAGTACTTGTATTAGTTGGATGAGCGATTTTAATTTATACGAATTAAAATATTTTAGTTATCAAATGAAATGATTTAATTTACAGGCTTTGGCAAGTGCATGGAAGGAGGCGTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGGTTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCGGCTGACCCAAAAGGA ATTCCCAAGCTAGGAATTTGATAAAAAAAAAGTAGATAGAGGAAAAAATGGGTTTGATATCAAACTTTGTGACATTATTACCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGCTTTGGCAAGTGCATGGAAGGAGGCGTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGGTTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCGGCTGACCCAAAAGGA ATGGGTTTGATATCAAACTTTGTGACATTATTACCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGCTTTGGCAAGTGCATGGAAGGAGGCGTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGGTTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCGGCTGACCCAAAAGGA MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG Homology
BLAST of MELO3C034568.1 vs. NCBI nr
Match: KAA0045608.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02648.1 exopolygalacturonase-like [Cucumis melo var. makuwa]) HSP 1 Score: 195.7 bits (496), Expect = 2.0e-46 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of MELO3C034568.1 vs. NCBI nr
Match: KAA0045594.1 (exopolygalacturonase-like [Cucumis melo var. makuwa]) HSP 1 Score: 190.7 bits (483), Expect = 6.3e-45 Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of MELO3C034568.1 vs. NCBI nr
Match: TYK28802.1 (exopolygalacturonase-like [Cucumis melo var. makuwa]) HSP 1 Score: 190.7 bits (483), Expect = 6.3e-45 Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of MELO3C034568.1 vs. NCBI nr
Match: KAA0045593.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK28803.1 exopolygalacturonase-like [Cucumis melo var. makuwa]) HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44 Identity = 98/101 (97.03%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of MELO3C034568.1 vs. NCBI nr
Match: KAA0045610.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02646.1 exopolygalacturonase-like [Cucumis melo var. makuwa]) HSP 1 Score: 181.0 bits (458), Expect = 5.0e-42 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of MELO3C034568.1 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.0e-21 Identity = 52/93 (55.91%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of MELO3C034568.1 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.9e-21 Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0
BLAST of MELO3C034568.1 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18 Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 0
BLAST of MELO3C034568.1 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.0e-18 Identity = 49/94 (52.13%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of MELO3C034568.1 vs. ExPASy Swiss-Prot
Match: W8P8Q3 (Probable galacturan 1,4-alpha-galacturonidase SALK6 OS=Kali turgidum OX=151250 PE=1 SV=3) HSP 1 Score: 91.7 bits (226), Expect = 5.3e-18 Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = 0
BLAST of MELO3C034568.1 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 9.5e-47 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of MELO3C034568.1 vs. ExPASy TrEMBL
Match: A0A5D3DYX7 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00040 PE=3 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45 Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of MELO3C034568.1 vs. ExPASy TrEMBL
Match: A0A5A7TR51 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00990 PE=3 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45 Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of MELO3C034568.1 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 5.2e-45 Identity = 98/101 (97.03%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of MELO3C034568.1 vs. ExPASy TrEMBL
Match: A0A5D3BWP4 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00550 PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.4e-42 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of MELO3C034568.1 vs. TAIR 10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of MELO3C034568.1 vs. TAIR 10
Match: AT1G43090.1 (Pectin lyase-like superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0
BLAST of MELO3C034568.1 vs. TAIR 10
Match: AT2G43890.1 (Pectin lyase-like superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11 Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of MELO3C034568.1 vs. TAIR 10
Match: AT2G26620.1 (Pectin lyase-like superfamily protein ) HSP 1 Score: 65.5 bits (158), Expect = 2.9e-11 Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of MELO3C034568.1 vs. TAIR 10
Match: AT1G05650.1 (Pectin lyase-like superfamily protein ) HSP 1 Score: 64.3 bits (155), Expect = 6.4e-11 Identity = 35/93 (37.63%), Postives = 51/93 (54.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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