MELO3C034568 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034568
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Exopolygalacturonase-like
Location	chr11: 1606999 .. 1607437 (-)
RNA-Seq Expression	MELO3C034568
Synteny	MELO3C034568

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCCAAGCTAGGAATTTGATAAAAAAAAAGTAGATAGAGGAAAAAATGGGTTTGATATCAAACTTTGTGACATTATTACCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGTACGAGTACTTGTATTAGTTGGATGAGCGATTTTAATTTATACGAATTAAAATATTTTAGTTATCAAATGAAATGATTTAATTTACAGGCTTTGGCAAGTGCATGGAAGGAGGCGTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGGTTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCGGCTGACCCAAAAGGA

mRNA sequence

ATTCCCAAGCTAGGAATTTGATAAAAAAAAAGTAGATAGAGGAAAAAATGGGTTTGATATCAAACTTTGTGACATTATTACCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGCTTTGGCAAGTGCATGGAAGGAGGCGTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGGTTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCGGCTGACCCAAAAGGA

Coding sequence (CDS)

ATGGGTTTGATATCAAACTTTGTGACATTATTACCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGCTTTGGCAAGTGCATGGAAGGAGGCGTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGGTTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCGGCTGACCCAAAAGGA

Protein sequence

MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG

Homology

[Close]

BLAST of MELO3C034568 vs. NCBI nr
Match: KAA0045608.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02648.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-46
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP
Sbjct: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 101

[Close]

BLAST of MELO3C034568 vs. NCBI nr
Match: KAA0045594.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 190.7 bits (483), Expect = 6.3e-45
Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFV LL VLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP
Sbjct: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 101

[Close]

BLAST of MELO3C034568 vs. NCBI nr
Match: TYK28802.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 190.7 bits (483), Expect = 6.3e-45
Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFV LL VLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP
Sbjct: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 101

[Close]

BLAST of MELO3C034568 vs. NCBI nr
Match: KAA0045593.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK28803.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 98/101 (97.03%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFV LLPVLLLLVSNSKAQSSG VFDITKYGAKPNADVTAAL SAWKEACASTTP
Sbjct: 1   MGLISNFVALLPVLLLLVSNSKAQSSGSVFDITKYGAKPNADVTAALVSAWKEACASTTP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 101

[Close]

BLAST of MELO3C034568 vs. NCBI nr
Match: KAA0045610.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02646.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 181.0 bits (458), Expect = 5.0e-42
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFV LL VLLLLVSN KAQSSG V DITK+GAKPNADVTAALASAWKEACASTTP
Sbjct: 1   MGLISNFVALLHVLLLLVSNCKAQSSGVVIDITKFGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 101

[Close]

BLAST of MELO3C034568 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-21
Identity = 52/93 (55.91%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 7   FVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIP 66
           F T + V  L +++  A  S GV DI+K+G KPN+D+  AL SAW EACASTT +K++IP
Sbjct: 3   FSTAIIVSFLFIADFCAAQS-GVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIP 62

Query: 67  KGSYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
            G+Y L+   LKGPCK+ IELQ++GT+QAPADP
Sbjct: 63  AGTYQLNGIELKGPCKAPIELQVDGTIQAPADP 94

[Close]

BLAST of MELO3C034568 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.9e-21
Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 14  LLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPKGSYGLS 73
           L+LL      +S  GVFDITKYGA  NAD++ AL +A+KEAC ST+PS ++IPKG++ ++
Sbjct: 11  LVLLFLAHFGESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMN 70

Query: 74  QSNLKGPCKSAIELQIEGTLQAPADP 100
           Q  L+GPCKS +ELQI+ TL+AP+DP
Sbjct: 71  QVKLEGPCKSPLELQIQATLKAPSDP 96

[Close]

BLAST of MELO3C034568 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18
Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 9   TLLPVLLLLVSNSKAQSSGGVFD-ITKYGAKPN--ADVTAALASAWKEACASTTPSKVLI 68
           ++  +LLL +S SK QS    FD + K+GAK +   D++     AWKEACAS TPS V+I
Sbjct: 10  SMFVLLLLFISASKVQSD--AFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVI 69

Query: 69  PKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
           PKG+Y LS+ NL+GPCK+ IE+ ++GT+QAPADP
Sbjct: 70  PKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADP 101

[Close]

BLAST of MELO3C034568 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.0e-18
Identity = 49/94 (52.13%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 9   TLLPVLLLLVSNSKAQSSGGVFD-ITKYGAKPN--ADVTAALASAWKEACASTTPSKVLI 68
           ++  +LLL +S SK Q     FD + K+GAK +   D++     AWKEACAS TPS V+I
Sbjct: 10  SMFVLLLLFISASKVQPD--AFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVI 69

Query: 69  PKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
           PKG+Y LS+ NL+GPCK+ IE+ ++GT+QAPADP
Sbjct: 70  PKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADP 101

[Close]

BLAST of MELO3C034568 vs. ExPASy Swiss-Prot
Match: W8P8Q3 (Probable galacturan 1,4-alpha-galacturonidase SALK6 OS=Kali turgidum OX=151250 PE=1 SV=3)

HSP 1 Score: 91.7 bits (226), Expect = 5.3e-18
Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 6  NFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLI 65
          N   L+ +  L VS +++Q   G  DITK+GAKPNAD T+AL +AWKEACA+  P+K+++
Sbjct: 5  NLPLLVALFYLFVSVARSQ---GPIDITKFGAKPNADATSALLAAWKEACAAAAPAKIVV 64

Query: 66 PKGSYGLSQSNLKGPCKSAIELQIEGTLQAPAD 99
          P G + L+   L+GPCK+ + ++I G  +APAD
Sbjct: 65 PAGEFLLNAVKLQGPCKAPLTIEIAGNFKAPAD 94

[Close]

BLAST of MELO3C034568 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.5e-47
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP
Sbjct: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 101

[Close]

BLAST of MELO3C034568 vs. ExPASy TrEMBL
Match: A0A5D3DYX7 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00040 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45
Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFV LL VLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP
Sbjct: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 101

[Close]

BLAST of MELO3C034568 vs. ExPASy TrEMBL
Match: A0A5A7TR51 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00990 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45
Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFV LL VLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP
Sbjct: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 101

[Close]

BLAST of MELO3C034568 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.2e-45
Identity = 98/101 (97.03%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFV LLPVLLLLVSNSKAQSSG VFDITKYGAKPNADVTAAL SAWKEACASTTP
Sbjct: 1   MGLISNFVALLPVLLLLVSNSKAQSSGSVFDITKYGAKPNADVTAALVSAWKEACASTTP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 101

[Close]

BLAST of MELO3C034568 vs. ExPASy TrEMBL
Match: A0A5D3BWP4 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00550 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.4e-42
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFV LL VLLLLVSN KAQSSG V DITK+GAKPNADVTAALASAWKEACASTTP
Sbjct: 1   MGLISNFVALLHVLLLLVSNCKAQSSGVVIDITKFGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 101

[Close]

BLAST of MELO3C034568 vs. TAIR 10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 25 SSGGVFDITKYGAKPN--ADVTAALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCK 84
          S+  VF++  +GAKP+   D T A   AW+ AC S + + V++PKG++ L      GPCK
Sbjct: 23 SASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTFLLKVITFGGPCK 82

Query: 85 SAIELQIEGTLQAPAD 99
          S I  Q+ GT+ AP D
Sbjct: 83 SKITFQVAGTVIAPED 98

[Close]

BLAST of MELO3C034568 vs. TAIR 10
Match: AT1G43090.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11
Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACAST 60
           + + S F  L    L +V  S+      VF++ +YG++P+   D   A  S WK AC   
Sbjct: 2   VSIASTFKALCLSFLFIVVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKHACTRI 61

Query: 61  T-PSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPK 101
           +  SK+ +PKG++ L      GPCK+ IE  I+GTL APA+P+
Sbjct: 62  SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPR 104

[Close]

BLAST of MELO3C034568 vs. TAIR 10
Match: AT2G43890.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11
Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 10  LLPVLLLLVSN---SKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACASTTPSKVL 69
           L+ VLL+  S+    K+ ++   +++  +GAKP+   D T A   AW+ AC S     V 
Sbjct: 6   LVAVLLMFFSSFLLMKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVT 65

Query: 70  IPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           +P+GS+ L     +GPC+S I  QI GT+ AP+D +G
Sbjct: 66  VPRGSFLLKPVEFRGPCRSRITFQIYGTIVAPSDYRG 102

[Close]

BLAST of MELO3C034568 vs. TAIR 10
Match: AT2G26620.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 2.9e-11
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 14  LLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACASTT-PSKVLIPKGSY 73
           LLL+V  S++     VF++ ++G+KP+   D T A  S W  AC   +  SK+ +PKG++
Sbjct: 15  LLLIVVASRSTIRPKVFNVQRHGSKPDGKTDNTNAFTSIWSRACKRISGSSKIYVPKGTF 74

Query: 74  GLSQSNLKGPCKSAIELQIEGTLQAPADP 100
            L      GPCK+ IE  I+GTL APA+P
Sbjct: 75  YLGGVEFVGPCKNPIEFIIDGTLLAPANP 103

[Close]

BLAST of MELO3C034568 vs. TAIR 10
Match: AT1G05650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 6.4e-11
Identity = 35/93 (37.63%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 8  VTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACASTTPSKVLI 67
          +T   +  LL     + S+  VF++  +GAKP+   D TAA   AW+ AC S   + V++
Sbjct: 6  ITFPLIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVV 65

Query: 68 PKGSYGLSQSNLKGPCKSAIELQIEGTLQAPAD 99
          P G++ L      GPCKS I  Q+ GT+ AP D
Sbjct: 66 PTGTFLLKVITFGGPCKSKITFQVTGTVVAPED 98

The following BLAST results are available for this feature:

BLAST of MELO3C034568 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045608.1	2.0e-46	100.00	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02648.1 exopolygalactur...	[more]
KAA0045594.1	6.3e-45	98.02	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
TYK28802.1	6.3e-45	98.02	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
KAA0045593.1	1.1e-44	97.03	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK28803.1 exopolygalactur...	[more]
KAA0045610.1	5.0e-42	94.06	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02646.1 exopolygalactur...	[more]

BLAST of MELO3C034568 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40312	1.0e-21	55.91	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q05967	3.9e-21	56.98	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
Q39786	1.1e-18	53.19	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	4.0e-18	52.13	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
W8P8Q3	5.3e-18	47.31	Probable galacturan 1,4-alpha-galacturonidase SALK6 OS=Kali turgidum OX=151250 P...	[more]

BLAST of MELO3C034568 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRZ0	9.5e-47	100.00	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3DYX7	3.1e-45	98.02	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TR51	3.1e-45	98.02	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3DYI3	5.2e-45	97.03	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3BWP4	2.4e-42	94.06	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of MELO3C034568 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05660.1	2.2e-11	42.11	Pectin lyase-like superfamily protein	[more]
AT1G43090.1	2.2e-11	36.89	Pectin lyase-like superfamily protein	[more]
AT2G43890.1	2.2e-11	37.11	Pectin lyase-like superfamily protein	[more]
AT2G26620.1	2.9e-11	41.57	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	6.4e-11	37.63	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 55..96 e-value: 3.2E-5 score: 23.1
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 17..101 e-value: 1.3E-15 score: 59.2
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 16..100
None	No IPR available	PANTHER	PTHR31375:SF190	POLYGALACTURONASE	coord: 16..100
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 18..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034568.1	MELO3C034568.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity