MELO3C034341.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C034341.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionZinc finger MYND domain-containing protein 15 isoform X1
Locationchr10: 10129590 .. 10130365 (+)
Sequence length252
RNA-Seq ExpressionMELO3C034341.1
SyntenyMELO3C034341.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCTAACTGTCGTCCTGCAGTGTTATATATGCTTTGATTTGTACCGCGTTAACTCATCAATCGAAACTTGTGGCATCGGTTTGGCCACCCAACGGTATGGTCGTTGCGAAGTTGTTGCTTACTATTCAGTTGATCGCCATGTTCGTTTATTATTCACAAGGCTCCTTGAATTTTGCCATTGGTTTCTTATACGTTTTTTAACCGAGAAATTCTAGACTTGGTTGTTATCTGTTCATACGATATCTTGAATCGAATAAACTTTGATAGTTTTAAATTCACTCAAATTAGAGCGATTTTCAGTTTTAGCTTAAAAGAGGTGATATTTTGGTTCTTATATTTTGAACCAAATGTAAGAAGCTCAATCCTTGTTCTCCAAATGGGTATATTATATCAAATTTTCTTATGTTGGTTCTCCATGATTTTGCTTCTAAACAAGGATATACATTTGTTATCTGACCAAAAGTGATTATATATAATTGTTACTTATATTGCCACGATGTTTATTGTTATCAAAATGCAAAAATTAGCTCAAGAACAAAATGAAAAGATTGAAAAAGTGAACCGTGAAAGAAAATTTCATCAAGTAAATAGCATCCCCATAATTCATACTACAATAATAGGGTAGAGGTTATTTAACATCCCTATATTTAATCTAGTATTACAGGTAGAAGCGGAGCACAAGGAGAAGGAAGAATCTGAGGAAGGCTCTGAACAAGAATCTGGGGATGAATCTGATGATCGGGGAGATAAACCTAGAGTTTGTATTCAGTGA

mRNA sequence

ATGATTCTAACTGTCGTCCTGCAGTGTTATATATGCTTTGATTTGTACCGCGTTAACTCATCAATCGAAACTTGTGGCATCGGTTTGGCCACCCAACGGTATGGTCGTTGCGAAGTTGTTGCTTACTATTCAGTTGATCGCCATGTAGAAGCGGAGCACAAGGAGAAGGAAGAATCTGAGGAAGGCTCTGAACAAGAATCTGGGGATGAATCTGATGATCGGGGAGATAAACCTAGAGTTTGTATTCAGTGA

Coding sequence (CDS)

ATGATTCTAACTGTCGTCCTGCAGTGTTATATATGCTTTGATTTGTACCGCGTTAACTCATCAATCGAAACTTGTGGCATCGGTTTGGCCACCCAACGGTATGGTCGTTGCGAAGTTGTTGCTTACTATTCAGTTGATCGCCATGTAGAAGCGGAGCACAAGGAGAAGGAAGAATCTGAGGAAGGCTCTGAACAAGAATCTGGGGATGAATCTGATGATCGGGGAGATAAACCTAGAGTTTGTATTCAGTGA

Protein sequence

MILTVVLQCYICFDLYRVNSSIETCGIGLATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ
Homology
BLAST of MELO3C034341.1 vs. NCBI nr
Match: TYK22772.1 (zinc finger MYND domain-containing protein 15 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 59/87 (67.82%), Postives = 63/87 (72.41%), Query Frame = 0

Query: 9   CYICFDLYRVNSSI------------ETCGIGLATQRYGRCEVVAYYSVDRHVEAEHKEK 68
           CYICF L+RVNSSI             T GI  AT+RYGRCEVVAYYSVD  VE EHKE+
Sbjct: 36  CYICFGLFRVNSSIGKKKKECAGKRRGTRGIDSATRRYGRCEVVAYYSVDHQVEVEHKEE 95

Query: 69  EESEEGSEQESGDESDDRGDKPRVCIQ 84
           EES+EGSEQES DE DD GDK RVCIQ
Sbjct: 96  EESKEGSEQESEDEFDDHGDKLRVCIQ 122

BLAST of MELO3C034341.1 vs. NCBI nr
Match: KAA0037625.1 (zinc finger MYND domain-containing protein 15 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-13
Identity = 47/60 (78.33%), Postives = 50/60 (83.33%), Query Frame = 0

Query: 24  TCGIGLATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 83
           T GI  AT+RYGRCEVVAYYSVD  VE EHKE+EES+EGSEQES DE DD GDK RVCIQ
Sbjct: 61  TRGIDSATRRYGRCEVVAYYSVDHQVEVEHKEEEESKEGSEQESEDEFDDHGDKLRVCIQ 120

BLAST of MELO3C034341.1 vs. NCBI nr
Match: KAA0039050.1 (hypothetical protein E6C27_scaffold84G001440 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-05
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 0

Query: 29 LATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 84
          LA ++  + E V        VEAEHKE+EESEEG EQESGDE DD+GDKPRVCIQ
Sbjct: 4  LAQEQNEKIEKVNRERKFHQVEAEHKEEEESEEGYEQESGDEYDDQGDKPRVCIQ 58

BLAST of MELO3C034341.1 vs. NCBI nr
Match: TYJ99755.1 (hypothetical protein E5676_scaffold252G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 6.9e-05
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 0

Query: 29 LATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 84
          LA ++  + E V        VEAEHKE+EESEEG EQESGDE DD+GDKPRVCI+
Sbjct: 19 LAQEQNEKIEKVNRERKFHQVEAEHKEEEESEEGYEQESGDEYDDQGDKPRVCIK 73

BLAST of MELO3C034341.1 vs. NCBI nr
Match: XP_008439793.1 (PREDICTED: 28 kDa heat- and acid-stable phosphoprotein [Cucumis melo] >TYK13174.1 28 kDa heat- and acid-stable phosphoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 9.9e-04
Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = 0

Query: 47 RHVEAEHKEKEESEEGSEQESGDESDDRGDKPR 80
          + VEAEHKE+EESEEGSEQESGDESDD+GDKPR
Sbjct: 34 KQVEAEHKEEEESEEGSEQESGDESDDQGDKPR 66

BLAST of MELO3C034341.1 vs. ExPASy TrEMBL
Match: A0A5D3DGM9 (Zinc finger MYND domain-containing protein 15 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00080 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.3e-19
Identity = 59/87 (67.82%), Postives = 63/87 (72.41%), Query Frame = 0

Query: 9   CYICFDLYRVNSSI------------ETCGIGLATQRYGRCEVVAYYSVDRHVEAEHKEK 68
           CYICF L+RVNSSI             T GI  AT+RYGRCEVVAYYSVD  VE EHKE+
Sbjct: 36  CYICFGLFRVNSSIGKKKKECAGKRRGTRGIDSATRRYGRCEVVAYYSVDHQVEVEHKEE 95

Query: 69  EESEEGSEQESGDESDDRGDKPRVCIQ 84
           EES+EGSEQES DE DD GDK RVCIQ
Sbjct: 96  EESKEGSEQESEDEFDDHGDKLRVCIQ 122

BLAST of MELO3C034341.1 vs. ExPASy TrEMBL
Match: A0A5A7T842 (Zinc finger MYND domain-containing protein 15 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002870 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-14
Identity = 47/60 (78.33%), Postives = 50/60 (83.33%), Query Frame = 0

Query: 24  TCGIGLATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 83
           T GI  AT+RYGRCEVVAYYSVD  VE EHKE+EES+EGSEQES DE DD GDK RVCIQ
Sbjct: 61  TRGIDSATRRYGRCEVVAYYSVDHQVEVEHKEEEESKEGSEQESEDEFDDHGDKLRVCIQ 120

BLAST of MELO3C034341.1 vs. ExPASy TrEMBL
Match: A0A5A7T722 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001440 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 0

Query: 29 LATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 84
          LA ++  + E V        VEAEHKE+EESEEG EQESGDE DD+GDKPRVCIQ
Sbjct: 4  LAQEQNEKIEKVNRERKFHQVEAEHKEEEESEEGYEQESGDEYDDQGDKPRVCIQ 58

BLAST of MELO3C034341.1 vs. ExPASy TrEMBL
Match: A0A5D3BN71 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00330 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.3e-05
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 0

Query: 29 LATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 84
          LA ++  + E V        VEAEHKE+EESEEG EQESGDE DD+GDKPRVCI+
Sbjct: 19 LAQEQNEKIEKVNRERKFHQVEAEHKEEEESEEGYEQESGDEYDDQGDKPRVCIK 73

BLAST of MELO3C034341.1 vs. ExPASy TrEMBL
Match: A0A5D3CQ74 (28 kDa heat-and acid-stable phosphoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007860 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.8e-04
Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = 0

Query: 47 RHVEAEHKEKEESEEGSEQESGDESDDRGDKPR 80
          + VEAEHKE+EESEEGSEQESGDESDD+GDKPR
Sbjct: 34 KQVEAEHKEEEESEEGSEQESGDESDDQGDKPR 66

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK22772.11.1e-1867.82zinc finger MYND domain-containing protein 15 isoform X1 [Cucumis melo var. maku... [more]
KAA0037625.11.1e-1378.33zinc finger MYND domain-containing protein 15 isoform X1 [Cucumis melo var. maku... [more]
KAA0039050.12.4e-0563.64hypothetical protein E6C27_scaffold84G001440 [Cucumis melo var. makuwa][more]
TYJ99755.16.9e-0561.82hypothetical protein E5676_scaffold252G00330 [Cucumis melo var. makuwa][more]
XP_008439793.19.9e-0487.88PREDICTED: 28 kDa heat- and acid-stable phosphoprotein [Cucumis melo] >TYK13174.... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DGM95.3e-1967.82Zinc finger MYND domain-containing protein 15 isoform X1 OS=Cucumis melo var. ma... [more]
A0A5A7T8425.1e-1478.33Zinc finger MYND domain-containing protein 15 isoform X1 OS=Cucumis melo var. ma... [more]
A0A5A7T7221.1e-0563.64Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BN713.3e-0561.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CQ744.8e-0487.8828 kDa heat-and acid-stable phosphoprotein OS=Cucumis melo var. makuwa OX=119469... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..83

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C034341MELO3C034341gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034341.1:exon:290309MELO3C034341.1:exon:290309exon
MELO3C034341.1:exon:290310MELO3C034341.1:exon:290310exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034341.1:cdsMELO3C034341.1:cdsCDS
MELO3C034341.1:cdsMELO3C034341.1:cds_2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C034341.1MELO3C034341.1-proteinpolypeptide