MELO3C034341 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034341
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Zinc finger MYND domain-containing protein 15 isoform X1
Location	chr10: 10129590 .. 10130365 (+)
RNA-Seq Expression	MELO3C034341
Synteny	MELO3C034341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTAACTGTCGTCCTGCAGTGTTATATATGCTTTGATTTGTACCGCGTTAACTCATCAATCGAAACTTGTGGCATCGGTTTGGCCACCCAACGGTATGGTCGTTGCGAAGTTGTTGCTTACTATTCAGTTGATCGCCATGTTCGTTTATTATTCACAAGGCTCCTTGAATTTTGCCATTGGTTTCTTATACGTTTTTTAACCGAGAAATTCTAGACTTGGTTGTTATCTGTTCATACGATATCTTGAATCGAATAAACTTTGATAGTTTTAAATTCACTCAAATTAGAGCGATTTTCAGTTTTAGCTTAAAAGAGGTGATATTTTGGTTCTTATATTTTGAACCAAATGTAAGAAGCTCAATCCTTGTTCTCCAAATGGGTATATTATATCAAATTTTCTTATGTTGGTTCTCCATGATTTTGCTTCTAAACAAGGATATACATTTGTTATCTGACCAAAAGTGATTATATATAATTGTTACTTATATTGCCACGATGTTTATTGTTATCAAAATGCAAAAATTAGCTCAAGAACAAAATGAAAAGATTGAAAAAGTGAACCGTGAAAGAAAATTTCATCAAGTAAATAGCATCCCCATAATTCATACTACAATAATAGGGTAGAGGTTATTTAACATCCCTATATTTAATCTAGTATTACAGGTAGAAGCGGAGCACAAGGAGAAGGAAGAATCTGAGGAAGGCTCTGAACAAGAATCTGGGGATGAATCTGATGATCGGGGAGATAAACCTAGAGTTTGTATTCAGTGA

mRNA sequence

ATGATTCTAACTGTCGTCCTGCAGTGTTATATATGCTTTGATTTGTACCGCGTTAACTCATCAATCGAAACTTGTGGCATCGGTTTGGCCACCCAACGGTATGGTCGTTGCGAAGTTGTTGCTTACTATTCAGTTGATCGCCATGTAGAAGCGGAGCACAAGGAGAAGGAAGAATCTGAGGAAGGCTCTGAACAAGAATCTGGGGATGAATCTGATGATCGGGGAGATAAACCTAGAGTTTGTATTCAGTGA

Coding sequence (CDS)

ATGATTCTAACTGTCGTCCTGCAGTGTTATATATGCTTTGATTTGTACCGCGTTAACTCATCAATCGAAACTTGTGGCATCGGTTTGGCCACCCAACGGTATGGTCGTTGCGAAGTTGTTGCTTACTATTCAGTTGATCGCCATGTAGAAGCGGAGCACAAGGAGAAGGAAGAATCTGAGGAAGGCTCTGAACAAGAATCTGGGGATGAATCTGATGATCGGGGAGATAAACCTAGAGTTTGTATTCAGTGA

Protein sequence

MILTVVLQCYICFDLYRVNSSIETCGIGLATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ

Homology

[Close]

BLAST of MELO3C034341 vs. NCBI nr
Match: TYK22772.1 (zinc finger MYND domain-containing protein 15 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 59/87 (67.82%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 9   CYICFDLYRVNSSI------------ETCGIGLATQRYGRCEVVAYYSVDRHVEAEHKEK 68
           CYICF L+RVNSSI             T GI  AT+RYGRCEVVAYYSVD  VE EHKE+
Sbjct: 36  CYICFGLFRVNSSIGKKKKECAGKRRGTRGIDSATRRYGRCEVVAYYSVDHQVEVEHKEE 95

Query: 69  EESEEGSEQESGDESDDRGDKPRVCIQ 84
           EES+EGSEQES DE DD GDK RVCIQ
Sbjct: 96  EESKEGSEQESEDEFDDHGDKLRVCIQ 122

[Close]

BLAST of MELO3C034341 vs. NCBI nr
Match: KAA0037625.1 (zinc finger MYND domain-containing protein 15 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-13
Identity = 47/60 (78.33%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 24  TCGIGLATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 83
           T GI  AT+RYGRCEVVAYYSVD  VE EHKE+EES+EGSEQES DE DD GDK RVCIQ
Sbjct: 61  TRGIDSATRRYGRCEVVAYYSVDHQVEVEHKEEEESKEGSEQESEDEFDDHGDKLRVCIQ 120

[Close]

BLAST of MELO3C034341 vs. NCBI nr
Match: KAA0039050.1 (hypothetical protein E6C27_scaffold84G001440 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-05
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 29 LATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 84
          LA ++  + E V        VEAEHKE+EESEEG EQESGDE DD+GDKPRVCIQ
Sbjct: 4  LAQEQNEKIEKVNRERKFHQVEAEHKEEEESEEGYEQESGDEYDDQGDKPRVCIQ 58

[Close]

BLAST of MELO3C034341 vs. NCBI nr
Match: TYJ99755.1 (hypothetical protein E5676_scaffold252G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 6.9e-05
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 29 LATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 84
          LA ++  + E V        VEAEHKE+EESEEG EQESGDE DD+GDKPRVCI+
Sbjct: 19 LAQEQNEKIEKVNRERKFHQVEAEHKEEEESEEGYEQESGDEYDDQGDKPRVCIK 73

[Close]

BLAST of MELO3C034341 vs. NCBI nr
Match: XP_008439793.1 (PREDICTED: 28 kDa heat- and acid-stable phosphoprotein [Cucumis melo] >TYK13174.1 28 kDa heat- and acid-stable phosphoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 9.9e-04
Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 47 RHVEAEHKEKEESEEGSEQESGDESDDRGDKPR 80
          + VEAEHKE+EESEEGSEQESGDESDD+GDKPR
Sbjct: 34 KQVEAEHKEEEESEEGSEQESGDESDDQGDKPR 66

[Close]

BLAST of MELO3C034341 vs. ExPASy TrEMBL
Match: A0A5D3DGM9 (Zinc finger MYND domain-containing protein 15 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00080 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.3e-19
Identity = 59/87 (67.82%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 9   CYICFDLYRVNSSI------------ETCGIGLATQRYGRCEVVAYYSVDRHVEAEHKEK 68
           CYICF L+RVNSSI             T GI  AT+RYGRCEVVAYYSVD  VE EHKE+
Sbjct: 36  CYICFGLFRVNSSIGKKKKECAGKRRGTRGIDSATRRYGRCEVVAYYSVDHQVEVEHKEE 95

Query: 69  EESEEGSEQESGDESDDRGDKPRVCIQ 84
           EES+EGSEQES DE DD GDK RVCIQ
Sbjct: 96  EESKEGSEQESEDEFDDHGDKLRVCIQ 122

[Close]

BLAST of MELO3C034341 vs. ExPASy TrEMBL
Match: A0A5A7T842 (Zinc finger MYND domain-containing protein 15 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002870 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-14
Identity = 47/60 (78.33%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 24  TCGIGLATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 83
           T GI  AT+RYGRCEVVAYYSVD  VE EHKE+EES+EGSEQES DE DD GDK RVCIQ
Sbjct: 61  TRGIDSATRRYGRCEVVAYYSVDHQVEVEHKEEEESKEGSEQESEDEFDDHGDKLRVCIQ 120

[Close]

BLAST of MELO3C034341 vs. ExPASy TrEMBL
Match: A0A5A7T722 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001440 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 29 LATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 84
          LA ++  + E V        VEAEHKE+EESEEG EQESGDE DD+GDKPRVCIQ
Sbjct: 4  LAQEQNEKIEKVNRERKFHQVEAEHKEEEESEEGYEQESGDEYDDQGDKPRVCIQ 58

[Close]

BLAST of MELO3C034341 vs. ExPASy TrEMBL
Match: A0A5D3BN71 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00330 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.3e-05
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 29 LATQRYGRCEVVAYYSVDRHVEAEHKEKEESEEGSEQESGDESDDRGDKPRVCIQ 84
          LA ++  + E V        VEAEHKE+EESEEG EQESGDE DD+GDKPRVCI+
Sbjct: 19 LAQEQNEKIEKVNRERKFHQVEAEHKEEEESEEGYEQESGDEYDDQGDKPRVCIK 73

[Close]

BLAST of MELO3C034341 vs. ExPASy TrEMBL
Match: A0A5D3CQ74 (28 kDa heat-and acid-stable phosphoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007860 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.8e-04
Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 47 RHVEAEHKEKEESEEGSEQESGDESDDRGDKPR 80
          + VEAEHKE+EESEEGSEQESGDESDD+GDKPR
Sbjct: 34 KQVEAEHKEEEESEEGSEQESGDESDDQGDKPR 66

The following BLAST results are available for this feature:

BLAST of MELO3C034341 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK22772.1	1.1e-18	67.82	zinc finger MYND domain-containing protein 15 isoform X1 [Cucumis melo var. maku...	[more]
KAA0037625.1	1.1e-13	78.33	zinc finger MYND domain-containing protein 15 isoform X1 [Cucumis melo var. maku...	[more]
KAA0039050.1	2.4e-05	63.64	hypothetical protein E6C27_scaffold84G001440 [Cucumis melo var. makuwa]	[more]
TYJ99755.1	6.9e-05	61.82	hypothetical protein E5676_scaffold252G00330 [Cucumis melo var. makuwa]	[more]
XP_008439793.1	9.9e-04	87.88	PREDICTED: 28 kDa heat- and acid-stable phosphoprotein [Cucumis melo] >TYK13174....	[more]

BLAST of MELO3C034341 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DGM9	5.3e-19	67.82	Zinc finger MYND domain-containing protein 15 isoform X1 OS=Cucumis melo var. ma...	[more]
A0A5A7T842	5.1e-14	78.33	Zinc finger MYND domain-containing protein 15 isoform X1 OS=Cucumis melo var. ma...	[more]
A0A5A7T722	1.1e-05	63.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BN71	3.3e-05	61.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CQ74	4.8e-04	87.88	28 kDa heat-and acid-stable phosphoprotein OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of MELO3C034341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034341.1	MELO3C034341.1	mRNA