MELO3C032822.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.GGTGAATCTCTCCTACAAAATCAACGCCGACAATAACTTCTGATTGACTCCACCTCCAAATTTCAAAATCACCACTTCCCATTTTCCAATCCCTCGAAATGGCTAATCCCACTTTAATCCCAATCAATCTCTCCGTCATCATCCATGTCGCTTTCCCCATCTTCTGCAAGTGCCCAAATCCCACCCAACTCCAAATTGGGTACAAACATATCAGAAATCACAGCCGTGAAAATTGGCCAAACCCGCAGTCATTTAACACAATTTTCATCAAGGAGAATCATCCAACCACCCCTCGCCTGTCTCTGTGCTCTTTAAACTGA GGTGAATCTCTCCTACAAAATCAACGCCGACAATAACTTCTGATTGACTCCACCTCCAAATTTCAAAATCACCACTTCCCATTTTCCAATCCCTCGAAATGGCTAATCCCACTTTAATCCCAATCAATCTCTCCGTCATCATCCATGTCGCTTTCCCCATCTTCTGCAAGTGCCCAAATCCCACCCAACTCCAAATTGGGTACAAACATATCAGAAATCACAGCCGTGAAAATTGGCCAAACCCGCAGTCATTTAACACAATTTTCATCAAGGAGAATCATCCAACCACCCCTCGCCTGTCTCTGTGCTCTTTAAACTGA ATGGCTAATCCCACTTTAATCCCAATCAATCTCTCCGTCATCATCCATGTCGCTTTCCCCATCTTCTGCAAGTGCCCAAATCCCACCCAACTCCAAATTGGGTACAAACATATCAGAAATCACAGCCGTGAAAATTGGCCAAACCCGCAGTCATTTAACACAATTTTCATCAAGGAGAATCATCCAACCACCCCTCGCCTGTCTCTGTGCTCTTTAAACTGA MANPTLIPINLSVIIHVAFPIFCKCPNPTQLQIGYKHIRNHSRENWPNPQSFNTIFIKENHPTTPRLSLCSLN Homology
BLAST of MELO3C032822.jh1.t1 vs. NCBI nr
Match: XP_008438594.1 (PREDICTED: lysM domain receptor-like kinase 4 [Cucumis melo]) HSP 1 Score: 67.8 bits (164), Expect = 4.61e-11 Identity = 36/83 (43.37%), Postives = 45/83 (54.22%), Query Frame = 0
BLAST of MELO3C032822.jh1.t1 vs. NCBI nr
Match: KAA0049311.1 (lysM domain receptor-like kinase 4 [Cucumis melo var. makuwa] >TYK17247.1 lysM domain receptor-like kinase 4 [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 2.19e-10 Identity = 35/79 (44.30%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of MELO3C032822.jh1.t1 vs. NCBI nr
Match: XP_011650952.1 (serine/threonine receptor-like kinase NFP [Cucumis sativus] >KGN56921.1 hypothetical protein Csa_011623 [Cucumis sativus]) HSP 1 Score: 62.8 bits (151), Expect = 2.67e-09 Identity = 38/82 (46.34%), Postives = 43/82 (52.44%), Query Frame = 0
BLAST of MELO3C032822.jh1.t1 vs. NCBI nr
Match: KAF3456904.1 (hypothetical protein FNV43_RR01558 [Rhamnella rubrinervis]) HSP 1 Score: 54.3 bits (129), Expect = 2.59e-06 Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of MELO3C032822.jh1.t1 vs. NCBI nr
Match: XP_041025192.1 (LOW QUALITY PROTEIN: serine/threonine receptor-like kinase NFP [Juglans microcarpa x Juglans regia]) HSP 1 Score: 53.1 bits (126), Expect = 6.63e-06 Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0
BLAST of MELO3C032822.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3AWS0 (lysM domain receptor-like kinase 4 OS=Cucumis melo OX=3656 GN=LOC103483654 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.23e-11 Identity = 36/83 (43.37%), Postives = 45/83 (54.22%), Query Frame = 0
BLAST of MELO3C032822.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7U6Q1 (LysM domain receptor-like kinase 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00980 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.06e-10 Identity = 35/79 (44.30%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of MELO3C032822.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0LA24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144110 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.29e-09 Identity = 38/82 (46.34%), Postives = 43/82 (52.44%), Query Frame = 0
BLAST of MELO3C032822.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5J5ACV9 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_035439 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 8.21e-06 Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0
BLAST of MELO3C032822.jh1.t1 vs. ExPASy TrEMBL
Match: A0A7N2R6D2 (Protein kinase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 8.21e-06 Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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