MELO3C028580.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview


Name	MELO3C028580.jh1.t1
Type	mRNA
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RING-type domain-containing protein
Location	chr01: 1190112 .. 1190894 (+)
Sequence length	783
RNA-Seq Expression	MELO3C028580.jh1.t1
Synteny	MELO3C028580.jh1.t1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCACAAATCTTTAATATTTGTAGGAATCGTCCCTTCGTCGGTATGTCACTAGAAATCAACGATTCCATCACGAGCATGAATCGAACACGAAAACGGATACGAACTCGACAAAACTCATCAAAATATGTCCAACACATCGACCTTAATTTCAAAGTCCAACTCAAATGCTCTCACTTTCTAGTATATGAAGATGGCATAACCACTACCACAAGTTTCCTTAATGAACACACATCTCGACCACATCCTTTAGCAACTTACAAACTTCCCATCTCCATCTTCAAGCATGGTGACAAAGCTTTGGAGCAATATCTTTTCCATAAGTTCCATGTCTATCGAGAATTCATCAACACAACACTCGTGGCTGATAGACTAATACAGCATTGGGTTAAAAGAGTCGAAGAAGATGATCATGAACACCAAGAGGAGAATAATAATCACGACTTTAATGTATTTCAAAAGATTTATCCTCTCGAAATTACATTAGAGATGCGGATCATTCAGAGGTATGTCGAAGAATCACCGATAATGATAATGGTTCCAACCAGTGACAGTGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATTGGGATGACGAAGGAATTAATTGTGTAATTTGTTTGGAGGAAATAAGTAGTAAAGAGGAGGAAGAAAGTGAGAAATCAGTGTTGCAGATGCCATGTTTGCATATGTTTCATGGAGAATGTATAAATAAATGGTTGAAGACGAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

mRNA sequence

ATGGCAGCACAAATCTTTAATATTTGTAGGAATCGTCCCTTCGTCGGTATGTCACTAGAAATCAACGATTCCATCACGAGCATGAATCGAACACGAAAACGGATACGAACTCGACAAAACTCATCAAAATATGTCCAACACATCGACCTTAATTTCAAAGTCCAACTCAAATGCTCTCACTTTCTAGTATATGAAGATGGCATAACCACTACCACAAGTTTCCTTAATGAACACACATCTCGACCACATCCTTTAGCAACTTACAAACTTCCCATCTCCATCTTCAAGCATGGTGACAAAGCTTTGGAGCAATATCTTTTCCATAAGTTCCATGTCTATCGAGAATTCATCAACACAACACTCGTGGCTGATAGACTAATACAGCATTGGGTTAAAAGAGTCGAAGAAGATGATCATGAACACCAAGAGGAGAATAATAATCACGACTTTAATGTATTTCAAAAGATTTATCCTCTCGAAATTACATTAGAGATGCGGATCATTCAGAGGTATGTCGAAGAATCACCGATAATGATAATGGTTCCAACCAGTGACAGTGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATTGGGATGACGAAGGAATTAATTGTGTAATTTGTTTGGAGGAAATAAGTAGTAAAGAGGAGGAAGAAAGTGAGAAATCAGTGTTGCAGATGCCATGTTTGCATATGTTTCATGGAGAATGTATAAATAAATGGTTGAAGACGAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Coding sequence (CDS)

ATGGCAGCACAAATCTTTAATATTTGTAGGAATCGTCCCTTCGTCGGTATGTCACTAGAAATCAACGATTCCATCACGAGCATGAATCGAACACGAAAACGGATACGAACTCGACAAAACTCATCAAAATATGTCCAACACATCGACCTTAATTTCAAAGTCCAACTCAAATGCTCTCACTTTCTAGTATATGAAGATGGCATAACCACTACCACAAGTTTCCTTAATGAACACACATCTCGACCACATCCTTTAGCAACTTACAAACTTCCCATCTCCATCTTCAAGCATGGTGACAAAGCTTTGGAGCAATATCTTTTCCATAAGTTCCATGTCTATCGAGAATTCATCAACACAACACTCGTGGCTGATAGACTAATACAGCATTGGGTTAAAAGAGTCGAAGAAGATGATCATGAACACCAAGAGGAGAATAATAATCACGACTTTAATGTATTTCAAAAGATTTATCCTCTCGAAATTACATTAGAGATGCGGATCATTCAGAGGTATGTCGAAGAATCACCGATAATGATAATGGTTCCAACCAGTGACAGTGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATTGGGATGACGAAGGAATTAATTGTGTAATTTGTTTGGAGGAAATAAGTAGTAAAGAGGAGGAAGAAAGTGAGAAATCAGTGTTGCAGATGCCATGTTTGCATATGTTTCATGGAGAATGTATAAATAAATGGTTGAAGACGAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Protein sequence

MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSHFLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTTLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN

Homology

[Close]

BLAST of MELO3C028580.jh1.t1 vs. NCBI nr
Match: TYK06862.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 531 bits (1367), Expect = 2.69e-190
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT
Sbjct: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120

Query: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIM 180
           LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIM
Sbjct: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIM 180

Query: 181 VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 240
           VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN
Sbjct: 181 VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 240

Query: 241 KWLKTSHYCPTCRFSMPTNN 260
           KWLKTSHYCPTCRFSMPTNN
Sbjct: 241 KWLKTSHYCPTCRFSMPTNN 260

[Close]

BLAST of MELO3C028580.jh1.t1 vs. NCBI nr
Match: KAA0031411.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 523 bits (1348), Expect = 2.12e-187
Identity = 256/260 (98.46%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFIN T
Sbjct: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINIT 120

Query: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIM 180
           LVADRLIQHWVKRVEEDDHE+QEENNNHDFNVFQKIYPLEITLEM+IIQRYVEESPIMIM
Sbjct: 121 LVADRLIQHWVKRVEEDDHEYQEENNNHDFNVFQKIYPLEITLEMQIIQRYVEESPIMIM 180

Query: 181 VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 240
           VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEE+EKSVLQMPCLHMFHGECIN
Sbjct: 181 VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEETEKSVLQMPCLHMFHGECIN 240

Query: 241 KWLKTSHYCPTCRFSMPTNN 260
           KWLKTSHYCPTCRFSMPTNN
Sbjct: 241 KWLKTSHYCPTCRFSMPTNN 260

[Close]

BLAST of MELO3C028580.jh1.t1 vs. NCBI nr
Match: KGN43806.1 (hypothetical protein Csa_017341 [Cucumis sativus])

HSP 1 Score: 404 bits (1039), Expect = 3.45e-140
Identity = 206/268 (76.87%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  FLV-YEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINT 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+ 
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMI 180
           TLVADR+IQHWVK+VEEDD +H EE NN DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEESEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE SEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 260
           MFH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

[Close]

BLAST of MELO3C028580.jh1.t1 vs. NCBI nr
Match: XP_011659722.2 (uncharacterized protein LOC105436242 [Cucumis sativus])

HSP 1 Score: 404 bits (1039), Expect = 5.88e-140
Identity = 206/268 (76.87%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 16  MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 75

Query: 61  FLV-YEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINT 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+ 
Sbjct: 76  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 135

Query: 121 TLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMI 180
           TLVADR+IQHWVK+VEEDD +H EE NN DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 136 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 195

Query: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEESEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE SEKSVLQMPCLH
Sbjct: 196 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 255

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 260
           MFH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 256 MFHEECIDKWLRTSHYCPTCRFSMPTNN 283

[Close]

BLAST of MELO3C028580.jh1.t1 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putative zinc finger protein [Cucumis melo var. makuwa] >TYK06863.1 putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 255 bits (651), Expect = 2.86e-81
Identity = 147/273 (53.85%), Postives = 188/273 (68.86%), Query Frame = 0


Query: 1   MAAQIFNICR--NRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKC 60
           MA +IFNICR  +  ++GMSL I D         +  +T  +S   V+ I L FKVQLKC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT--SSPTLVEQICLKFKVQLKC 60

Query: 61  SHFLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFIN 120
            HF V+E G   +T+ + EH    H  AT++LPISIFKHGDK L++ LF +F +Y + IN
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 TTLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQ--RYVEESP 180
             L+A+ +I+HWV++VEE+  E QE N+N    +F+KIYPLEI + + + +  R V+   
Sbjct: 121 IELLANEIIKHWVRKVEEE--EDQENNSN---VLFKKIYPLEIMIRLLVSKMIRAVQPRL 180

Query: 181 IMI----MVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQ 240
            MI    MVPTSDSA+ESML+RVEN+      DDE INCV+CLEEIS KEE+ SE +VLQ
Sbjct: 181 AMIDQPLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEIS-KEEKGSETTVLQ 240

Query: 241 MPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 260
           MPCLHMFH ECI KWLKTSHYCPTCRFSMP +N
Sbjct: 241 MPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q7ZW78 (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 3.9e-09
Identity = 28/80 (35.00%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 182 PTSDSAIESM-LRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 241
           P + + ++S+ +  +  +  D+G+ C +CL E       E ++SV +MPC H+FH  CI 
Sbjct: 54  PAAKAVVQSLPVVIISPEQADKGVKCPVCLLEF------EEQESVREMPCKHLFHTGCIL 113

Query: 242 KWLKTSHYCPTCRFSMPTNN 261
            WL  ++ CP CR  +PT+N
Sbjct: 114 PWLNKTNSCPLCRLELPTDN 127

[Close]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.8e-09
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 182 PTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINK 241
           P + + +ES+ R V      E + C +CL E       E E++V++MPC H+FH  CI  
Sbjct: 65  PAAKAVVESLPRTVIRSSKAE-LKCPVCLLEF------EEEETVIEMPCHHLFHSNCILP 124

Query: 242 WLKTSHYCPTCRFSMPTNN 261
           WL  ++ CP CR  +PT++
Sbjct: 125 WLSKTNSCPLCRHELPTDD 136

[Close]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 182 PTSDSAIESMLRRVENDWDDEG-INCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 241
           P S SAIES+ R   +D   +   NC +C E   +  E        +MPC H+FHG+CI 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGR------EMPCKHIFHGDCIV 249

Query: 242 KWLKTSHYCPTCRFSMPTN 260
            WL   + CP CRF +P++
Sbjct: 250 PWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9CY62 (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 28/79 (35.44%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 182 PTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINK 241
           P + + +ES+ R V +    + + C +CL E       E+E++V++MPC H+FH  CI  
Sbjct: 65  PAAKAVVESLPRTVISSAKAD-LKCPVCLLEF------EAEETVIEMPCHHLFHSNCILP 124

Query: 242 WLKTSHYCPTCRFSMPTNN 261
           WL  ++ CP CR  +PT++
Sbjct: 125 WLSKTNSCPLCRHELPTDD 136

[Close]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 154 QKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCVICLEEI 213
           Q +  LE +  M  + R + ES      P S ++I++M   VE D   EG  CVICL   
Sbjct: 64  QGMIVLEGSSGMNPLLRSLLESREEGRPPASKASIDAM-PIVEID-GCEG-ECVICL--- 123

Query: 214 SSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTN 260
              EE +SE++V +MPC H FHG CI KWL     CP CR+ MP +
Sbjct: 124 ---EEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3C6D9 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001660 PE=4 SV=1)

HSP 1 Score: 531 bits (1367), Expect = 1.30e-190
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT
Sbjct: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120

Query: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIM 180
           LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIM
Sbjct: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIM 180

Query: 181 VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 240
           VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN
Sbjct: 181 VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 240

Query: 241 KWLKTSHYCPTCRFSMPTNN 260
           KWLKTSHYCPTCRFSMPTNN
Sbjct: 241 KWLKTSHYCPTCRFSMPTNN 260

[Close]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7SPE2 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001670 PE=4 SV=1)

HSP 1 Score: 523 bits (1348), Expect = 1.03e-187
Identity = 256/260 (98.46%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFIN T
Sbjct: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINIT 120

Query: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIM 180
           LVADRLIQHWVKRVEEDDHE+QEENNNHDFNVFQKIYPLEITLEM+IIQRYVEESPIMIM
Sbjct: 121 LVADRLIQHWVKRVEEDDHEYQEENNNHDFNVFQKIYPLEITLEMQIIQRYVEESPIMIM 180

Query: 181 VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 240
           VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEE+EKSVLQMPCLHMFHGECIN
Sbjct: 181 VPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEETEKSVLQMPCLHMFHGECIN 240

Query: 241 KWLKTSHYCPTCRFSMPTNN 260
           KWLKTSHYCPTCRFSMPTNN
Sbjct: 241 KWLKTSHYCPTCRFSMPTNN 260

[Close]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0K7L5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 PE=4 SV=1)

HSP 1 Score: 404 bits (1039), Expect = 1.67e-140
Identity = 206/268 (76.87%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  FLV-YEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINT 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+ 
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMI 180
           TLVADR+IQHWVK+VEEDD +H EE NN DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEESEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE SEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 260
           MFH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

[Close]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0K2A5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 273 bits (699), Expect = 6.86e-89
Identity = 144/267 (53.93%), Postives = 190/267 (71.16%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MA +IF+ CR   ++GM L I D      R + +IRTR+NS  + + IDLNF+VQLKC H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           F + E+  + TT+ ++EH    HP AT++LPISI +HGDK L+  LF +FH+YR+ IN  
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQ--RYVEESP-I 180
            + D +I++WV +VEE   E +++ N+    VF+KIY LEITLE+ I Q  R ++  P +
Sbjct: 121 HLVDEIIKYWVTKVEE---EEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQV 180

Query: 181 MIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQMPCLH 240
           ++MVPTSDSA+ESML+RVEN+      DD+ I+CVICLEEI  KEE+ SE  VLQMPCLH
Sbjct: 181 LMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIG-KEEKGSEGVVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTN 259
           +FHGECINKWL TSHYCPTCRF MP N
Sbjct: 241 VFHGECINKWLNTSHYCPTCRFPMPIN 263

[Close]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0K7L0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 259 bits (663), Expect = 2.24e-83
Identity = 144/278 (51.80%), Postives = 188/278 (67.63%), Query Frame = 0


Query: 1   MAAQIFNICR--NRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKC 60
           MA QIF  CR  +  ++GMSL I D     ++ + +IRT  NS   V+ IDLNFKV++KC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDP-DLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  SHFLVYEDGITTT--TSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREF 120
            H+    +G  +T  T+ L+EH S  HPL T +LP+SIFKHGDK L++ LF +F +YR  
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 INTTLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQ------- 180
           IN  LV D +I+HWVK+V+E+         N    VF++IYPLEIT+E+ + Q       
Sbjct: 121 INIELVVDEIIKHWVKKVDEE---------NSTSQVFEEIYPLEITIELLVYQMIHAIDQ 180

Query: 181 --RYVEESPIMIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESE 240
               + + P ++MVPTS+SA+ESML++VEN+      D++ INCVICLEEIS KE++ SE
Sbjct: 181 PHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEIS-KEKKGSE 240

Query: 241 KSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 260
             VLQMPCLHMFH ECI KWLK SHYCPTCRFSMPTNN
Sbjct: 241 AVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of MELO3C028580.jh1.t1 vs. TAIR 10
Match: AT5G08139.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 9.6e-11
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 174 ESPIMIMVPTSDSAIESM---LRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPC 233
           E  ++ + PTS S + ++   L   END DD G+ C +C      K+E       +Q+PC
Sbjct: 275 EVSVIGLPPTSKSFLNNLPVVLLEGEND-DDGGLVCAVC------KDEMNIGNKAVQLPC 334

Query: 234 LHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
            H +H ECI  WLK  + CP CR+ +PT++
Sbjct: 335 NHKYHSECIVPWLKVRNTCPVCRYELPTDD 357

[Close]

BLAST of MELO3C028580.jh1.t1 vs. TAIR 10
Match: AT2G29840.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 41/132 (31.06%), Postives = 59/132 (44.70%), Query Frame = 0


Query: 129 HWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAI 188
           HW+ R E D     EE  +  F               +++Q    E+    + P S  A+
Sbjct: 178 HWLPRYEHDFDHQTEEAFHPQFE--------------QVLQASFNETNTARLKPASKLAV 237

Query: 189 ESMLRRVENDWDD---EGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKT 248
           ES+ R+      D   E   C ICLEE       +  +S++ +PC H F  EC  KW +T
Sbjct: 238 ESLNRKTYKKASDVVGENEMCSICLEEF------DDGRSIVALPCGHEFDDECALKWFET 289

Query: 249 SHYCPTCRFSMP 258
           +H CP CRF +P
Sbjct: 298 NHDCPLCRFKLP 289

[Close]

BLAST of MELO3C028580.jh1.t1 vs. TAIR 10
Match: AT3G13228.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-10
Identity = 30/102 (29.41%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 156 IYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCVICLEEISS 215
           ++P + T     +Q   +E+    + P S   ++S+ R++ +  +  G  C ICLEE + 
Sbjct: 225 LFPHDETDIEEAVQVSFDETTNFCLGPASKLVVKSLTRKIYDKINYTGERCTICLEEFN- 284

Query: 216 KEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMP 258
                +   ++ +PC H F  EC  KW +T+H+CP CR+ +P
Sbjct: 285 -----AGGILVALPCGHDFDDECAVKWFETNHFCPLCRYELP 320

[Close]

BLAST of MELO3C028580.jh1.t1 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 62.0 bits (149), Expect = 8.1e-10
Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 182 PTSDSAIESMLRRVENDWDDEG-INCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 241
           P S SAIES+ R   +D   +   NC +C E   +  E        +MPC H+FHG+CI 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGR------EMPCKHIFHGDCIV 249

Query: 242 KWLKTSHYCPTCRFSMPTN 260
            WL   + CP CRF +P++
Sbjct: 250 PWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of MELO3C028580.jh1.t1 vs. TAIR 10
Match: AT1G74620.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 206 CVICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMP 258
           C IC+E+       E    V ++PC H FHG+CINKWL+ +H CP CR S+P
Sbjct: 183 CAICMEDYI-----EGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIP 229

The following BLAST results are available for this feature:

BLAST of MELO3C028580.jh1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06862.1	2.69e-190	100.00	putative zinc finger protein [Cucumis melo var. makuwa]	[more]
KAA0031411.1	2.12e-187	98.46	putative zinc finger protein [Cucumis melo var. makuwa]	[more]
KGN43806.1	3.45e-140	76.87	hypothetical protein Csa_017341 [Cucumis sativus]	[more]
XP_011659722.2	5.88e-140	76.87	uncharacterized protein LOC105436242 [Cucumis sativus]	[more]
ADN34252.1	2.86e-81	53.85	hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putati...	[more]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7ZW78	3.9e-09	35.00	E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2	[more]
Q6AXU4	8.8e-09	36.71	E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ...	[more]
Q9SNB6	1.1e-08	39.24	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q9CY62	1.1e-08	35.44	E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1	[more]
Q9LQX2	1.5e-08	41.51	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]

BLAST of MELO3C028580.jh1.t1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6D9	1.30e-190	100.00	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7SPE2	1.03e-187	98.46	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0K7L5	1.67e-140	76.87	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 P...	[more]
A0A0A0K2A5	6.86e-89	53.93	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 P...	[more]
A0A0A0K7L0	2.24e-83	51.80	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 P...	[more]

BLAST of MELO3C028580.jh1.t1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08139.1	9.6e-11	36.67	RING/U-box superfamily protein	[more]
AT2G29840.1	1.3e-10	31.06	RING/U-box superfamily protein	[more]
AT3G13228.1	3.7e-10	29.41	RING/U-box superfamily protein	[more]
AT3G46620.1	8.1e-10	39.24	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G74620.1	1.1e-09	48.08	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 206..252 e-value: 5.0E-8 score: 42.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 205..253 e-value: 3.6E-12 score: 46.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 206..253 score: 12.740079
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 205..253 e-value: 0.0023 score: 12.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 174..259 e-value: 1.3E-17 score: 65.2
None	No IPR available	PANTHER	PTHR15710:SF120	F6A14.12 PROTEIN-RELATED	coord: 74..258
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 74..258
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 196..257

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C028580.jh1	MELO3C028580.jh1	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028580.jh1.t1.exon	MELO3C028580.jh1.t1.exon	exon

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028580.jh1.t1.start_codon	MELO3C028580.jh1.t1.start_codon	start_codon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028580.jh1.t1.cds	MELO3C028580.jh1.t1.cds	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028580.jh1.t1.stop_codon	MELO3C028580.jh1.t1.stop_codon	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C028580.jh1.t1	MELO3C028580.jh1.t1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding