MELO3C026909.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGTAAGAAAGTGCTATGTGCTACGATCTTTGAAGTACATAATAGCTAATGTGGTAGATAGAAATAATGGACGGATTGTCGCAATTGCGTCCACAGTCGAACACTCCATCAAAGGCTCACTTGAATGTGGCCGGTCTTGCAATGCTAAGACAGCAGCCGTTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTCGATGGTCTCAACAGGGGCAAGGAAGAGGCATTCACGCAAACATAA ATGATAGTAAGAAAGTGCTATGTGCTACGATCTTTGAAGTACATAATAGCTAATGTGGTAGATAGAAATAATGGACGGATTGTCGCAATTGCGTCCACAGTCGAACACTCCATCAAAGGCTCACTTGAATGTGGCCGGTCTTGCAATGCTAAGACAGCAGCCGTTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTCGATGGTCTCAACAGGGGCAAGGAAGAGGCATTCACGCAAACATAA ATGATAGTAAGAAAGTGCTATGTGCTACGATCTTTGAAGTACATAATAGCTAATGTGGTAGATAGAAATAATGGACGGATTGTCGCAATTGCGTCCACAGTCGAACACTCCATCAAAGGCTCACTTGAATGTGGCCGGTCTTGCAATGCTAAGACAGCAGCCGTTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTCGATGGTCTCAACAGGGGCAAGGAAGAGGCATTCACGCAAACATAA MIVRKCYVLRSLKYIIANVVDRNNGRIVAIASTVEHSIKGSLECGRSCNAKTAAVVGEVLAMRLKVDGLNRGKEEAFTQT Homology
BLAST of MELO3C026909.jh1.t1 vs. NCBI nr
Match: KAA0035229.1 (50S ribosomal protein L18-like [Cucumis melo var. makuwa] >TYK22381.1 50S ribosomal protein L18-like [Cucumis melo var. makuwa]) HSP 1 Score: 155 bits (392), Expect = 1.70e-47 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. NCBI nr
Match: XP_038901007.1 (uncharacterized protein LOC120088052 [Benincasa hispida] >XP_038901008.1 uncharacterized protein LOC120088052 [Benincasa hispida] >XP_038901009.1 uncharacterized protein LOC120088052 [Benincasa hispida]) HSP 1 Score: 115 bits (289), Expect = 3.58e-31 Identity = 64/76 (84.21%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. NCBI nr
Match: XP_022140774.1 (uncharacterized protein LOC111011356 [Momordica charantia] >XP_022140775.1 uncharacterized protein LOC111011356 [Momordica charantia]) HSP 1 Score: 115 bits (288), Expect = 5.08e-31 Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. NCBI nr
Match: XP_022985582.1 (uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985583.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985584.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985585.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985586.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985588.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985589.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985590.1 uncharacterized protein LOC111483610 [Cucurbita maxima]) HSP 1 Score: 114 bits (286), Expect = 1.02e-30 Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. NCBI nr
Match: XP_023511782.1 (uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511783.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511784.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511785.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511786.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511787.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511788.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 114 bits (286), Expect = 1.02e-30 Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q5F5U3 (50S ribosomal protein L18 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=rplR PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 7.6e-04 Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. ExPASy Swiss-Prot
Match: A9M3V0 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup C (strain 053442) OX=374833 GN=rplR PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 7.6e-04 Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9JQQ6 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=rplR PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 7.6e-04 Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q7DDT0 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=rplR PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 7.6e-04 Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. ExPASy Swiss-Prot
Match: A1KRI9 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18) OX=272831 GN=rplR PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 7.6e-04 Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3DFB1 (50S ribosomal protein L18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00040 PE=4 SV=1) HSP 1 Score: 155 bits (392), Expect = 8.25e-48 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1CGQ4 (uncharacterized protein LOC111011356 OS=Momordica charantia OX=3673 GN=LOC111011356 PE=4 SV=1) HSP 1 Score: 115 bits (288), Expect = 2.46e-31 Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1JBQ5 (uncharacterized protein LOC111483610 OS=Cucurbita maxima OX=3661 GN=LOC111483610 PE=4 SV=1) HSP 1 Score: 114 bits (286), Expect = 4.95e-31 Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1FXG0 (uncharacterized protein LOC111448460 OS=Cucurbita moschata OX=3662 GN=LOC111448460 PE=4 SV=1) HSP 1 Score: 114 bits (286), Expect = 4.95e-31 Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. ExPASy TrEMBL
Match: A0A2P2K4N5 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 114 bits (284), Expect = 5.10e-31 Identity = 62/80 (77.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of MELO3C026909.jh1.t1 vs. TAIR 10
Match: AT3G45020.1 (Ribosomal L18p/L5e family protein ) HSP 1 Score: 106.7 bits (265), Expect = 8.9e-24 Identity = 57/76 (75.00%), Postives = 63/76 (82.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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