MELO3C022650.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview
NameMELO3C022650.jh1.t1
TypemRNA
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionSerine/arginine repetitive matrix protein 2, putative isoform 2
Locationchr04: 18828189 .. 18830021 (+)
Sequence length1067
RNA-Seq ExpressionMELO3C022650.jh1.t1
SyntenyMELO3C022650.jh1.t1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATGTAGTAATATCCTCCCGTACTACAACCCTTCCTTTTAGGATAAAATTAAATCAAATTAGCAATTCCCAATTCCAATCCTCTCCCACTCCCAAAGTTCTTCTGGCTCTCTATCACCTTCTCCATTTTTCCATTTATCTCCATATTCCTTATGTCTCGCTCTTCTCTATCCAAACCCAAATCCCTAGCCCTAACCCTAAATCTCCTCCGCCCTCACATCTTCCGCCGTACTTTCTCCTCACCTTCCGATCACGATCTCACCGATCTCCCTGAATCTCCTTCTTCCTCCGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCATCCTCGTTCGCCGATCTGCTCCCGATTGGCTCCCCTTCGTTCCTGGAGCTTCCTATTGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCCCATTGCCAGCGTTCTTCGTAACTTGGCTAACCCTCTCTCTCATGAACAATCCTTGTCTACCACTACTGTCCGTGGCTGGCCCTCTTCTCATTACTTCATTCAAGGTATTCCTCTTCTTTCGTATTTCGTTTTCATTTTATCTCTATTCTATCTCTCTCTCTCTCTCTTTTTAAATTATTTATTTAGGAAAAAAAATACCCTTTCATCGTAGGTACGCATCTTCCTTCTCTTGATCCGGAGGTTGACACCACGTCGACTGAATGTGATGCTTCCCTTGATCGCGAGGAAGGATGAGAACCCGATCTGGGTTTGTTCCTATTAGTTCTCATACTAAACTAGTTTCTGGCGCTATAATGAAGTCTGAATTATATTTTCTTTTGCCCTGCAAGTTATTAGATTTGTATATTGAGATACTTTCAATCAAAGAATTAACTTGATAGCTCCTTTATTGTGATTAATTTCTACAAATTAGCACTCTTCAGATTGTCATGTTCTCTACTTTTCTCTACTCTCATTTCATATTGTTACGAGAAGCACGTTTATAATCTTGAACAGTGATAGCTCTTTGTATACCCGTATGTTGGAATTCTAATCTAAGATTTGGAGATTGCTATACTTTTTGGAGTGATTTTCTAGATTGAAGTTTACATCAGTTTATAGCAGAGGAAGATAAGTTTTCAACTTTTGACTTTGGTCTGCAGCTTGCTTGGTGTTGTTTGAAATCTTGTGTAATTTTTGGAAGATCATTCCTTTTTAGCTTTGTTGGGTTCATCTACTCGGCTCGAGTCTGTTACCTTTCTCTTTTGATATCGTAACCTTGTTTCCTAAAAACAAAACTGTAGATTTTGTGCGTCTATTGTAATGAGCGTTCTTTATGGTGGAAGAATTGGGGGGAGGGGGGCAATTAGAAGTAACATTTATTTATCGTTTGAGAACTGAATCACATTTTCTTGTAAAAAATACAAGATCCTAGAGATAATGAAAGTAATACAAATGATGGCATTTTCTTCTACTACTATTTGCAGCTCACCCTGCCTTGTAAACTTCATGTATAGAAGAAGACAACCGAATAACAGACTAGCAAGATGGCCGAGCAAAGTGTAGAAGCTTGTACAGATGTGAAACTGGTTGGCGAGTGTTATTTATCCAATGGCTCTTCGTCCATCATTTCGAAGTTTCTGCTCTTGAACGCTCTTAAATGTTTTTCCTTTTGAGTAATTTATTTCTTTCAACTTTTCGCATATGTATTGTGTTCTCTTGTTGTATACCAAGATACGCATAGTGATTCGATCTTTTGATCACCCATTTTAAGTAGGTTTAGAAAGAAGGTTTACGAATCAAACTCCTCGCCTTTCGGTCGAAGCCACATTTGAAATAGAATGAGAGGACAGAGAGAACTATCGAGGGTTCT

mRNA sequence

ATTATGTAGTAATATCCTCCCGTACTACAACCCTTCCTTTTAGGATAAAATTAAATCAAATTAGCAATTCCCAATTCCAATCCTCTCCCACTCCCAAAGTTCTTCTGGCTCTCTATCACCTTCTCCATTTTTCCATTTATCTCCATATTCCTTATGTCTCGCTCTTCTCTATCCAAACCCAAATCCCTAGCCCTAACCCTAAATCTCCTCCGCCCTCACATCTTCCGCCGTACTTTCTCCTCACCTTCCGATCACGATCTCACCGATCTCCCTGAATCTCCTTCTTCCTCCGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCATCCTCGTTCGCCGATCTGCTCCCGATTGGCTCCCCTTCGTTCCTGGAGCTTCCTATTGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCCCATTGCCAGCGTTCTTCGTAACTTGGCTAACCCTCTCTCTCATGAACAATCCTTGTCTACCACTACTGTCCGTGGCTGGCCCTCTTCTCATTACTTCATTCAAGGTACGCATCTTCCTTCTCTTGATCCGGAGGTTGACACCACGTCGACTGAATGTGATGCTTCCCTTGATCGCGAGGAAGGATGAGAACCCGATCTGGATCCTAGAGATAATGAAAGTAATACAAATGATGGCATTTTCTTCTACTACTATTTGCAGCTCACCCTGCCTTGTAAACTTCATGTATAGAAGAAGACAACCGAATAACAGACTAGCAAGATGGCCGAGCAAAGTGTAGAAGCTTGTACAGATGTGAAACTGGTTGGCGAGTGTTATTTATCCAATGGCTCTTCGTCCATCATTTCGAAGTTTCTGCTCTTGAACGCTCTTAAATGTTTTTCCTTTTGAGTAATTTATTTCTTTCAACTTTTCGCATATGTATTGTGTTCTCTTGTTGTATACCAAGATACGCATAGTGATTCGATCTTTTGATCACCCATTTTAAGTAGGTTTAGAAAGAAGGTTTACGAATCAAACTCCTCGCCTTTCGGTCGAAGCCACATTTGAAATAGAATGAGAGGACAGAGAGAACTATCGAGGGTTCT

Coding sequence (CDS)

ATGTCTCGCTCTTCTCTATCCAAACCCAAATCCCTAGCCCTAACCCTAAATCTCCTCCGCCCTCACATCTTCCGCCGTACTTTCTCCTCACCTTCCGATCACGATCTCACCGATCTCCCTGAATCTCCTTCTTCCTCCGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCATCCTCGTTCGCCGATCTGCTCCCGATTGGCTCCCCTTCGTTCCTGGAGCTTCCTATTGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCCCATTGCCAGCGTTCTTCGTAACTTGGCTAACCCTCTCTCTCATGAACAATCCTTGTCTACCACTACTGTCCGTGGCTGGCCCTCTTCTCATTACTTCATTCAAGGTACGCATCTTCCTTCTCTTGATCCGGAGGTTGACACCACGTCGACTGAATGTGATGCTTCCCTTGATCGCGAGGAAGGATGA

Protein sequence

MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSHYFIQGTHLPSLDPEVDTTSTECDASLDREEG
Homology
[Close]
BLAST of MELO3C022650.jh1.t1 vs. NCBI nr
Match: XP_008460271.1 (PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >XP_008460272.1 PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >XP_008460273.1 PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >KAA0065598.1 uncharacterized protein E6C27_scaffold90G00420 [Cucumis melo var. makuwa] >TYK07168.1 uncharacterized protein E5676_scaffold606G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 305 bits (782), Expect = 1.02e-104
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151
           YFIQGTHLPSLDPEVDTTSTECDASLDREEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151

[Close]
BLAST of MELO3C022650.jh1.t1 vs. NCBI nr
Match: XP_004135962.1 (uncharacterized protein LOC101214133 [Cucumis sativus])

HSP 1 Score: 290 bits (742), Expect = 1.29e-98
Identity = 143/151 (94.70%), Postives = 146/151 (96.69%), Query Frame = 0 

Query: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MS S+LSKPKSL LTLNLLRPH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120

Query: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151
           YFIQGTHLPSLDPEVDTTSTECDASLD EEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDHEEG 151

[Close]
BLAST of MELO3C022650.jh1.t1 vs. NCBI nr
Match: KAE8646378.1 (hypothetical protein Csa_015587 [Cucumis sativus])

HSP 1 Score: 290 bits (742), Expect = 3.37e-98
Identity = 143/151 (94.70%), Postives = 146/151 (96.69%), Query Frame = 0 

Query: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MS S+LSKPKSL LTLNLLRPH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120

Query: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151
           YFIQGTHLPSLDPEVDTTSTECDASLD EEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDHEEG 151

[Close]
BLAST of MELO3C022650.jh1.t1 vs. NCBI nr
Match: XP_008460275.1 (PREDICTED: uncharacterized protein LOC103499150 isoform X3 [Cucumis melo])

HSP 1 Score: 253 bits (647), Expect = 1.69e-84
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 

Query: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIQG 125
           YFIQG
Sbjct: 121 YFIQG 125

[Close]
BLAST of MELO3C022650.jh1.t1 vs. NCBI nr
Match: XP_008460274.1 (PREDICTED: uncharacterized protein LOC103499150 isoform X2 [Cucumis melo])

HSP 1 Score: 251 bits (641), Expect = 1.54e-83
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIQ 124
           YFIQ
Sbjct: 121 YFIQ 124

[Close]
BLAST of MELO3C022650.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3CC43 (uncharacterized protein LOC103499150 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499150 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 4.93e-105
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151
           YFIQGTHLPSLDPEVDTTSTECDASLDREEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151

[Close]
BLAST of MELO3C022650.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7VD84 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00450 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 4.93e-105
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151
           YFIQGTHLPSLDPEVDTTSTECDASLDREEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151

[Close]
BLAST of MELO3C022650.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0K9L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G419630 PE=4 SV=1)

HSP 1 Score: 290 bits (742), Expect = 6.22e-99
Identity = 143/151 (94.70%), Postives = 146/151 (96.69%), Query Frame = 0 

Query: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MS S+LSKPKSL LTLNLLRPH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120

Query: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151
           YFIQGTHLPSLDPEVDTTSTECDASLD EEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDHEEG 151

[Close]
BLAST of MELO3C022650.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3CC81 (uncharacterized protein LOC103499150 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499150 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 8.20e-85
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 

Query: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIQG 125
           YFIQG
Sbjct: 121 YFIQG 125

[Close]
BLAST of MELO3C022650.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3CBN8 (uncharacterized protein LOC103499150 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499150 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 7.45e-84
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIQ 124
           YFIQ
Sbjct: 121 YFIQ 124

[Close]
BLAST of MELO3C022650.jh1.t1 vs. TAIR 10
Match: AT1G16840.4 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-28
Identity = 77/156 (49.36%), Postives = 96/156 (61.54%), Query Frame = 0 

Query: 2   SRS-SLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPE------SPSSSDPLLRNLE 61
           SRS SLSK +  A + +LL P     +F S S     DL E      S S SDPL++ LE
Sbjct: 6   SRSLSLSKGRFAAASSSLL-PSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLE 65

Query: 62  DAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIASVLRNLANPLSHEQSLSTTTV 121
           DA+ RI VRR+ PDWLPFVPGASYWVP P S S    IA ++  LANPL+HE+SLST + 
Sbjct: 66  DAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSS 125

Query: 122 RGWPSSHYFIQGTHLPSLDPEVDTTSTECDASLDRE 150
            GWPSS YF++G     ++ + +TTS     S D E
Sbjct: 126 HGWPSSDYFLKGVQPQLMETKTETTSNSESHSEDEE 160

[Close]
BLAST of MELO3C022650.jh1.t1 vs. TAIR 10
Match: AT1G16840.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-28
Identity = 77/156 (49.36%), Postives = 96/156 (61.54%), Query Frame = 0 

Query: 2   SRS-SLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPE------SPSSSDPLLRNLE 61
           SRS SLSK +  A + +LL P     +F S S     DL E      S S SDPL++ LE
Sbjct: 6   SRSLSLSKGRFAAASSSLL-PSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLE 65

Query: 62  DAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIASVLRNLANPLSHEQSLSTTTV 121
           DA+ RI VRR+ PDWLPFVPGASYWVP P S S    IA ++  LANPL+HE+SLST + 
Sbjct: 66  DAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSS 125

Query: 122 RGWPSSHYFIQGTHLPSLDPEVDTTSTECDASLDRE 150
            GWPSS YF++G     ++ + +TTS     S D E
Sbjct: 126 HGWPSSDYFLKGVQPQLMETKTETTSNSESHSEDEE 160

[Close]
BLAST of MELO3C022650.jh1.t1 vs. TAIR 10
Match: AT1G16840.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-28
Identity = 77/156 (49.36%), Postives = 96/156 (61.54%), Query Frame = 0 

Query: 2   SRS-SLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPE------SPSSSDPLLRNLE 61
           SRS SLSK +  A + +LL P     +F S S     DL E      S S SDPL++ LE
Sbjct: 6   SRSLSLSKGRFAAASSSLL-PSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLE 65

Query: 62  DAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIASVLRNLANPLSHEQSLSTTTV 121
           DA+ RI VRR+ PDWLPFVPGASYWVP P S S    IA ++  LANPL+HE+SLST + 
Sbjct: 66  DAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSS 125

Query: 122 RGWPSSHYFIQGTHLPSLDPEVDTTSTECDASLDRE 150
            GWPSS YF++G     ++ + +TTS     S D E
Sbjct: 126 HGWPSSDYFLKGVQPQLMETKTETTSNSESHSEDEE 160

[Close]
BLAST of MELO3C022650.jh1.t1 vs. TAIR 10
Match: AT1G16840.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.7 bits (291), Expect = 1.6e-26
Identity = 71/134 (52.99%), Postives = 88/134 (65.67%), Query Frame = 0 

Query: 2   SRS-SLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPE------SPSSSDPLLRNLE 61
           SRS SLSK +  A + +LL P     +F S S     DL E      S S SDPL++ LE
Sbjct: 6   SRSLSLSKGRFAAASSSLL-PSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLE 65

Query: 62  DAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIASVLRNLANPLSHEQSLSTTTV 121
           DA+ RI VRR+ PDWLPFVPGASYWVP P S S    IA ++  LANPL+HE+SLST + 
Sbjct: 66  DAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSS 125

Query: 122 RGWPSSHYFIQGTH 128
            GWPSS YF++G++
Sbjct: 126 HGWPSSDYFLKGSY 138

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BLAST of MELO3C022650.jh1.t1 vs. TAIR 10
Match: AT1G78890.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 4.0e-25
Identity = 75/159 (47.17%), Postives = 99/159 (62.26%), Query Frame = 0 

Query: 1   MSRS---SLSKPKSLALTLNLLRPH---IFRRTFSS---PSDHDLTDLPESPSSSDPLLR 60
           M+RS   SLS  +      +LL P    IF R+ SS    + + L  + E   ++DPL+ 
Sbjct: 1   MARSLSPSLSLSRYRFAAASLLLPSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAADPLVN 60

Query: 61  NLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIASVLRNLANPLSHEQSLST 120
            LEDA+ RI+VRRSAPDWLPFVPGAS+WVP P S SH   IA ++  LANP+S E+S+S 
Sbjct: 61  KLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSH--GIAKLVEKLANPISDEESISI 120

Query: 121 TTVRGWPSSHYFIQGTHLPSLDPEVDTTSTECDASLDRE 150
           ++VRGWP S YFI+G    S++ E+  TS     S D E
Sbjct: 121 SSVRGWPCSDYFIKGVKPQSVETEM--TSNTAYHSEDEE 155

The following BLAST results are available for this feature:
BLAST of MELO3C022650.jh1.t1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460271.11.02e-104100.00PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >XP_00... [more]
XP_004135962.11.29e-9894.70uncharacterized protein LOC101214133 [Cucumis sativus][more]
KAE8646378.13.37e-9894.70hypothetical protein Csa_015587 [Cucumis sativus][more]
XP_008460275.11.69e-84100.00PREDICTED: uncharacterized protein LOC103499150 isoform X3 [Cucumis melo][more]
XP_008460274.11.54e-83100.00PREDICTED: uncharacterized protein LOC103499150 isoform X2 [Cucumis melo][more]
BLAST of MELO3C022650.jh1.t1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C022650.jh1.t1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CC434.93e-105100.00uncharacterized protein LOC103499150 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7VD844.93e-105100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K9L96.22e-9994.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G419630 PE=4 SV=1[more]
A0A1S3CC818.20e-85100.00uncharacterized protein LOC103499150 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CBN87.45e-84100.00uncharacterized protein LOC103499150 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of MELO3C022650.jh1.t1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G16840.43.0e-2849.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G16840.33.0e-2849.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G16840.13.0e-2849.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G16840.21.6e-2652.99unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G78890.14.0e-2547.17unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..151
NoneNo IPR availablePANTHERPTHR33972:SF16REPETITIVE MATRIX PROTEIN 2, PUTATIVE ISOFORM 1-RELATEDcoord: 22..149
NoneNo IPR availablePANTHERPTHR33972EXPRESSED PROTEINcoord: 22..149

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C022650.jh1MELO3C022650.jh1gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C022650.jh1.t1.exonMELO3C022650.jh1.t1.exonexon
MELO3C022650.jh1.t1.exonMELO3C022650.jh1.t1.exon_2exon
MELO3C022650.jh1.t1.exonMELO3C022650.jh1.t1.exon_3exon


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C022650.jh1.t1.start_codonMELO3C022650.jh1.t1.start_codonstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C022650.jh1.t1.cdsMELO3C022650.jh1.t1.cdsCDS
MELO3C022650.jh1.t1.cdsMELO3C022650.jh1.t1.cds_2CDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C022650.jh1.t1.stop_codonMELO3C022650.jh1.t1.stop_codonstop_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C022650.jh1.t1MELO3C022650.jh1.t1-proteinpolypeptide