Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCGGAAAAATCCACAGAAATGGATTTCTTCTTCTTCGACAAAGCAGAGAAGCTTTCCACTCCCATTCCTCGCTGCAATCTCCTCCAAATCTTCTCCAAGTTCTTCCGTTTTCTAGAACTTTCCTTCCTCCTCCTCTCCCTCTCATGGATCTTCTCTCGCCTTCCCATCGCCCTCAGAATCTCCGCCGACTATTTCACTAAACTCTTCGCCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCTCAATTCTCACGCCCCGCCACTTCTGATCAAACCGATCGGATTTATGAAGACCTCATTGAAAAAACCGGAACCGGATCGGACTTAACTGATTCTGCCTCGGAGGAAGTGGAGGAGATTGTGTACCAGGACAAAGAAATCATTGCGGAGGGGAGGGTTGGTTCAAATTATTCAACCGATTGTGAAATTGAACTGAAGAACACGGATCTGGAGTCGGACTCGGGATTAGGTCACTCTAAAGTGATTTTGAGGAGTTTGTCGGAGAAACTTAACCGAGAATGTGTGAAAACGCAGAGTGAGAAGCTTCGACGATCGGAGACAGAGAAGTGCCGGAATCTGGAGTATTCGAATGACATTTTATATTACCAGGATGATTTGAGTAGTGAGGAATTTCAGAGAAAGATTGAGGCGTTTATAGCTAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTCCGCCATTGTTGTTCTTCATTGCGACGGTTAATCTTCCTGCTTAAAATTAGACGATTAAAAATTATTAGAAAAAAAAAAAAAGAAAAGAAAAAGAAGAAGAAGAAGAAGAAGAAAAATTGGCCGTACTAATTATGTTGGGCAATGTACAGAGTAAAATTTCTTTTACCTACAGAAGGGTAAAATTGGTATTTTAAATTCCTTCTTTTGTTAGATTGGGATTTTGTTTGTCTGTTACTCGTCCTATTGTTGCTTGGTAGACTTGCGTTTGACAA
mRNA sequence
TCTCGGAAAAATCCACAGAAATGGATTTCTTCTTCTTCGACAAAGCAGAGAAGCTTTCCACTCCCATTCCTCGCTGCAATCTCCTCCAAATCTTCTCCAAGTTCTTCCGTTTTCTAGAACTTTCCTTCCTCCTCCTCTCCCTCTCATGGATCTTCTCTCGCCTTCCCATCGCCCTCAGAATCTCCGCCGACTATTTCACTAAACTCTTCGCCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCTCAATTCTCACGCCCCGCCACTTCTGATCAAACCGATCGGATTTATGAAGACCTCATTGAAAAAACCGGAACCGGATCGGACTTAACTGATTCTGCCTCGGAGGAAGTGGAGGAGATTGTGTACCAGGACAAAGAAATCATTGCGGAGGGGAGGGTTGGTTCAAATTATTCAACCGATTGTGAAATTGAACTGAAGAACACGGATCTGGAGTCGGACTCGGGATTAGGTCACTCTAAAGTGATTTTGAGGAGTTTGTCGGAGAAACTTAACCGAGAATGTGTGAAAACGCAGAGTGAGAAGCTTCGACGATCGGAGACAGAGAAGTGCCGGAATCTGGAGTATTCGAATGACATTTTATATTACCAGGATGATTTGAGTAGTGAGGAATTTCAGAGAAAGATTGAGGCGTTTATAGCTAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTCCGCCATTGTTGTTCTTCATTGCGACGGTTAATCTTCCTGCTTAAAATTAGACGATTAAAAATTATTAGAAAAAAAAAAAAAGAAAAGAAAAAGAAGAAGAAGAAGAAGAAGAAAAATTGGCCGTACTAATTATGTTGGGCAATGTACAGAGTAAAATTTCTTTTACCTACAGAAGGGTAAAATTGGTATTTTAAATTCCTTCTTTTGTTAGATTGGGATTTTGTTTGTCTGTTACTCGTCCTATTGTTGCTTGGTAGACTTGCGTTTGACAA
Coding sequence (CDS)
ATGGATTTCTTCTTCTTCGACAAAGCAGAGAAGCTTTCCACTCCCATTCCTCGCTGCAATCTCCTCCAAATCTTCTCCAAGTTCTTCCGTTTTCTAGAACTTTCCTTCCTCCTCCTCTCCCTCTCATGGATCTTCTCTCGCCTTCCCATCGCCCTCAGAATCTCCGCCGACTATTTCACTAAACTCTTCGCCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCTCAATTCTCACGCCCCGCCACTTCTGATCAAACCGATCGGATTTATGAAGACCTCATTGAAAAAACCGGAACCGGATCGGACTTAACTGATTCTGCCTCGGAGGAAGTGGAGGAGATTGTGTACCAGGACAAAGAAATCATTGCGGAGGGGAGGGTTGGTTCAAATTATTCAACCGATTGTGAAATTGAACTGAAGAACACGGATCTGGAGTCGGACTCGGGATTAGGTCACTCTAAAGTGATTTTGAGGAGTTTGTCGGAGAAACTTAACCGAGAATGTGTGAAAACGCAGAGTGAGAAGCTTCGACGATCGGAGACAGAGAAGTGCCGGAATCTGGAGTATTCGAATGACATTTTATATTACCAGGATGATTTGAGTAGTGAGGAATTTCAGAGAAAGATTGAGGCGTTTATAGCTAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTCCGCCATTGTTGTTCTTCATTGCGACGGTTAA
Protein sequence
MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFTKLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
Homology
BLAST of MELO3C016396.jh1.t1 vs. NCBI nr
Match:
XP_008452094.1 (PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])
HSP 1 Score: 467 bits (1201), Expect = 2.00e-165
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT
Sbjct: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
Query: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA
Sbjct: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
Query: 241 VVLHCDG 247
VVLHCDG
Sbjct: 241 VVLHCDG 247
BLAST of MELO3C016396.jh1.t1 vs. NCBI nr
Match:
KAA0044789.1 (putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])
HSP 1 Score: 459 bits (1182), Expect = 1.58e-162
Identity = 244/247 (98.79%), Postives = 244/247 (98.79%), Query Frame = 0
Query: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
MDFFFFDKAEKLSTPIPRCNLLQIFSKFFR LELSFLLLSLSWIFSRLPIALRISADYFT
Sbjct: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60
Query: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIE TGTGSDLTDSA
Sbjct: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIENTGTGSDLTDSA 120
Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGL HSKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLSEKLNRE 180
Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
Query: 241 VVLHCDG 247
VVLHCDG
Sbjct: 241 VVLHCDG 247
BLAST of MELO3C016396.jh1.t1 vs. NCBI nr
Match:
XP_011653156.1 (uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical protein Csa_015101 [Cucumis sativus])
HSP 1 Score: 426 bits (1094), Expect = 3.93e-149
Identity = 230/247 (93.12%), Postives = 238/247 (96.36%), Query Frame = 0
Query: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISA+Y T
Sbjct: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60
Query: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
KLFAFIATPLFGFLLCNAIIVALVAKPSQFSR TS+ T RIYEDLI+KTGTGSDLTDSA
Sbjct: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSE-THRIYEDLIDKTGTGSDLTDSA 120
Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
SEEVEEIVYQDK+IIAEGRVGSNYSTDCEIE+KNTDLES+SGLG SKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSEKLNRE 180
Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
CVKT+SEKLRRSETEKC NLE +NDIL YQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
Query: 241 VVLHCDG 247
VVLHCDG
Sbjct: 241 VVLHCDG 246
BLAST of MELO3C016396.jh1.t1 vs. NCBI nr
Match:
XP_038888396.1 (uncharacterized protein LOC120078241 [Benincasa hispida])
HSP 1 Score: 374 bits (959), Expect = 1.49e-128
Identity = 208/253 (82.21%), Postives = 226/253 (89.33%), Query Frame = 0
Query: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
MDFFFFDKAEK+S PIPRCNLLQIF+KFFRFLELSFLLL LSWI SRLPIAL +SA+YF
Sbjct: 1 MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60
Query: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSD------QTDRIYEDLIEKTGTGS 120
KLFAF+ATPLFGFLLCNAIIVALVAKP+QF RPA+S + DRIYEDLIEKTG+G
Sbjct: 61 KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG- 120
Query: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLS 180
DLTDS SEEVE IVYQDK+IIAEG S D EIE+KNTDLE++SGLGHSKV+LR+LS
Sbjct: 121 DLTDSLSEEVE-IVYQDKQIIAEGI----NSIDREIEVKNTDLETESGLGHSKVMLRTLS 180
Query: 181 EKLNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRR 240
EKLNRECV T+ EKLRRSETEKCRNLE+SNDILY+QDDLSSEEFQRKIEAFIAKEKKFRR
Sbjct: 181 EKLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRR 240
Query: 241 EESSAIVVLHCDG 247
EESSAIVVLHCDG
Sbjct: 241 EESSAIVVLHCDG 247
BLAST of MELO3C016396.jh1.t1 vs. NCBI nr
Match:
XP_022136879.1 (uncharacterized protein LOC111008461, partial [Momordica charantia])
HSP 1 Score: 303 bits (777), Expect = 7.02e-101
Identity = 182/253 (71.94%), Postives = 208/253 (82.21%), Query Frame = 0
Query: 1 MDFFFFDKAEKLSTPIPR--CNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADY 60
MDFFFFDKAEK T IPR CNLLQIF+K FRFLEL LL+ LSWI SRLP A+RIS +Y
Sbjct: 1 MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60
Query: 61 FTKLFAFIATPLFGFLLCNAIIVALVAKPSQFS--RPATSD--QTDRIYEDLIEKTGTGS 120
FTKLFAF+A+PLFGF+LCNAIIVALVAKPSQ S R A D +TDR+YEDLI K+G G
Sbjct: 61 FTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNG- 120
Query: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLS 180
DL +S SE+ E IV+QDKEIIAE + S D ++E+K+TD E++SG+ H KVI R+LS
Sbjct: 121 DLPESPSEDGE-IVFQDKEIIAE----AINSIDRDVEVKSTDPEAESGIDHPKVIRRTLS 180
Query: 181 EKLNRECVKTQSEKLRRSETEKCRN-LEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFR 240
EK+ REC KTQSEKLRRSETEKCRN LE S+DI+YYQDDLSSEEFQRKIEAFIA+EKKFR
Sbjct: 181 EKIKRECSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFR 240
Query: 241 REESSAIVVLHCD 246
REESSAIV LH D
Sbjct: 241 REESSAIV-LHSD 246
BLAST of MELO3C016396.jh1.t1 vs. ExPASy TrEMBL
Match:
A0A5D3CYU3 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005060 PE=4 SV=1)
HSP 1 Score: 467 bits (1201), Expect = 9.70e-166
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT
Sbjct: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
Query: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA
Sbjct: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
Query: 241 VVLHCDG 247
VVLHCDG
Sbjct: 241 VVLHCDG 247
BLAST of MELO3C016396.jh1.t1 vs. ExPASy TrEMBL
Match:
A0A1S3BT40 (uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=4 SV=1)
HSP 1 Score: 467 bits (1201), Expect = 9.70e-166
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT
Sbjct: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
Query: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA
Sbjct: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
Query: 241 VVLHCDG 247
VVLHCDG
Sbjct: 241 VVLHCDG 247
BLAST of MELO3C016396.jh1.t1 vs. ExPASy TrEMBL
Match:
A0A5A7TU70 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00800 PE=4 SV=1)
HSP 1 Score: 459 bits (1182), Expect = 7.64e-163
Identity = 244/247 (98.79%), Postives = 244/247 (98.79%), Query Frame = 0
Query: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
MDFFFFDKAEKLSTPIPRCNLLQIFSKFFR LELSFLLLSLSWIFSRLPIALRISADYFT
Sbjct: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60
Query: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIE TGTGSDLTDSA
Sbjct: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIENTGTGSDLTDSA 120
Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGL HSKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLSEKLNRE 180
Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
Query: 241 VVLHCDG 247
VVLHCDG
Sbjct: 241 VVLHCDG 247
BLAST of MELO3C016396.jh1.t1 vs. ExPASy TrEMBL
Match:
A0A0A0KY10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1)
HSP 1 Score: 426 bits (1094), Expect = 1.90e-149
Identity = 230/247 (93.12%), Postives = 238/247 (96.36%), Query Frame = 0
Query: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISA+Y T
Sbjct: 1 MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60
Query: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
KLFAFIATPLFGFLLCNAIIVALVAKPSQFSR TS+ T RIYEDLI+KTGTGSDLTDSA
Sbjct: 61 KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSE-THRIYEDLIDKTGTGSDLTDSA 120
Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
SEEVEEIVYQDK+IIAEGRVGSNYSTDCEIE+KNTDLES+SGLG SKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSEKLNRE 180
Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
CVKT+SEKLRRSETEKC NLE +NDIL YQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
Query: 241 VVLHCDG 247
VVLHCDG
Sbjct: 241 VVLHCDG 246
BLAST of MELO3C016396.jh1.t1 vs. ExPASy TrEMBL
Match:
A0A6J1C5K3 (uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008461 PE=4 SV=1)
HSP 1 Score: 303 bits (777), Expect = 3.40e-101
Identity = 182/253 (71.94%), Postives = 208/253 (82.21%), Query Frame = 0
Query: 1 MDFFFFDKAEKLSTPIPR--CNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADY 60
MDFFFFDKAEK T IPR CNLLQIF+K FRFLEL LL+ LSWI SRLP A+RIS +Y
Sbjct: 1 MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60
Query: 61 FTKLFAFIATPLFGFLLCNAIIVALVAKPSQFS--RPATSD--QTDRIYEDLIEKTGTGS 120
FTKLFAF+A+PLFGF+LCNAIIVALVAKPSQ S R A D +TDR+YEDLI K+G G
Sbjct: 61 FTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNG- 120
Query: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLS 180
DL +S SE+ E IV+QDKEIIAE + S D ++E+K+TD E++SG+ H KVI R+LS
Sbjct: 121 DLPESPSEDGE-IVFQDKEIIAE----AINSIDRDVEVKSTDPEAESGIDHPKVIRRTLS 180
Query: 181 EKLNRECVKTQSEKLRRSETEKCRN-LEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFR 240
EK+ REC KTQSEKLRRSETEKCRN LE S+DI+YYQDDLSSEEFQRKIEAFIA+EKKFR
Sbjct: 181 EKIKRECSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFR 240
Query: 241 REESSAIVVLHCD 246
REESSAIV LH D
Sbjct: 241 REESSAIV-LHSD 246
BLAST of MELO3C016396.jh1.t1 vs. TAIR 10
Match:
AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 124.4 bits (311), Expect = 1.3e-28
Identity = 97/253 (38.34%), Postives = 142/253 (56.13%), Query Frame = 0
Query: 1 MDFFFFD--KAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADY 60
MD F FD KAEK + + R N +FFR E+ LL + W FS+LP ++IS +
Sbjct: 1 MDSFDFDNVKAEK-AKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAF 60
Query: 61 FTKLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTD 120
++ A I+TPLF FLL N+I+V L+ K S + A + IY+ + S +D
Sbjct: 61 LRRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTTTAVASAETEIYQAFVRSVENRSKPSD 120
Query: 121 SASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLN 180
+ E IVY DK++I + SN + + + + +++SDS HSKV RS S+
Sbjct: 121 --EDLTEGIVYDDKQVIVTD-LDSNPNLTVDENMPHVEIDSDSS-PHSKVYGRSKSDVSG 180
Query: 181 RE----CVKTQSEKLRRSETEK-CRNLEYSNDI----LYYQDDLSSEEFQRKIEAFIAKE 240
++ + L+RSETEK C+ E +D Y +DDLS+EEFQ+ IEAFIAK+
Sbjct: 181 KQSSNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQ 240
Query: 241 KKFRREESSAIVV 243
+ FRR+ES A+VV
Sbjct: 241 RMFRRQESLAVVV 248
BLAST of MELO3C016396.jh1.t1 vs. TAIR 10
Match:
AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 59.7 bits (143), Expect = 3.8e-09
Identity = 68/245 (27.76%), Postives = 116/245 (47.35%), Query Frame = 0
Query: 8 KAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFTKLFAFIA 67
K EK S I ++ F+ FR EL L++ +S + P +++IS D F + F+
Sbjct: 10 KMEK-SRGILNFQAIRSFTSLFRLFELLLLVILISKL--SFP-SVKISGDIFKEAAVFLV 69
Query: 68 TPLFGFLLCNAIIVALVAKPSQF------SRPATSDQTDRIYEDLIEKTGTGSDLTDSAS 127
+P F F + NAI++ L+AK ++ S+ AT ++ +Y++ + K S
Sbjct: 70 SPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHK-----------S 129
Query: 128 EEVEEIVY-----QDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEK 187
E+ + +VY Q K+ RV S + LES +G K + R +SEK
Sbjct: 130 EKKKPVVYATKTEQLKKPSGGKRVSFGRSQSHKAFEAVKPLESTNG---EKNMKRYVSEK 189
Query: 188 LNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREE 242
R C + +R + E D +S+E+F+ KIEAFIA++K+ +++E
Sbjct: 190 HMRVCDSDKKVVVRVKKPE---------------DGMSNEQFRTKIEAFIARQKRIQKDE 221
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008452094.1 | 2.00e-165 | 100.00 | PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putat... | [more] |
KAA0044789.1 | 1.58e-162 | 98.79 | putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [C... | [more] |
XP_011653156.1 | 3.93e-149 | 93.12 | uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical ... | [more] |
XP_038888396.1 | 1.49e-128 | 82.21 | uncharacterized protein LOC120078241 [Benincasa hispida] | [more] |
XP_022136879.1 | 7.02e-101 | 71.94 | uncharacterized protein LOC111008461, partial [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CYU3 | 9.70e-166 | 100.00 | Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS... | [more] |
A0A1S3BT40 | 9.70e-166 | 100.00 | uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=... | [more] |
A0A5A7TU70 | 7.64e-163 | 98.79 | Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS... | [more] |
A0A0A0KY10 | 1.90e-149 | 93.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1 | [more] |
A0A6J1C5K3 | 3.40e-101 | 71.94 | uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
Match Name | E-value | Identity | Description | |
AT5G66440.1 | 1.3e-28 | 38.34 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT4G34560.1 | 3.8e-09 | 27.76 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |