MELO3C016396.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C016396.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Unknown protein
Location	chr07: 23285506 .. 23286510 (-)
RNA-Seq Expression	MELO3C016396.jh1
Synteny	MELO3C016396.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCGGAAAAATCCACAGAAATGGATTTCTTCTTCTTCGACAAAGCAGAGAAGCTTTCCACTCCCATTCCTCGCTGCAATCTCCTCCAAATCTTCTCCAAGTTCTTCCGTTTTCTAGAACTTTCCTTCCTCCTCCTCTCCCTCTCATGGATCTTCTCTCGCCTTCCCATCGCCCTCAGAATCTCCGCCGACTATTTCACTAAACTCTTCGCCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCTCAATTCTCACGCCCCGCCACTTCTGATCAAACCGATCGGATTTATGAAGACCTCATTGAAAAAACCGGAACCGGATCGGACTTAACTGATTCTGCCTCGGAGGAAGTGGAGGAGATTGTGTACCAGGACAAAGAAATCATTGCGGAGGGGAGGGTTGGTTCAAATTATTCAACCGATTGTGAAATTGAACTGAAGAACACGGATCTGGAGTCGGACTCGGGATTAGGTCACTCTAAAGTGATTTTGAGGAGTTTGTCGGAGAAACTTAACCGAGAATGTGTGAAAACGCAGAGTGAGAAGCTTCGACGATCGGAGACAGAGAAGTGCCGGAATCTGGAGTATTCGAATGACATTTTATATTACCAGGATGATTTGAGTAGTGAGGAATTTCAGAGAAAGATTGAGGCGTTTATAGCTAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTCCGCCATTGTTGTTCTTCATTGCGACGGTTAATCTTCCTGCTTAAAATTAGACGATTAAAAATTATTAGAAAAAAAAAAAAAGAAAAGAAAAAGAAGAAGAAGAAGAAGAAGAAAAATTGGCCGTACTAATTATGTTGGGCAATGTACAGAGTAAAATTTCTTTTACCTACAGAAGGGTAAAATTGGTATTTTAAATTCCTTCTTTTGTTAGATTGGGATTTTGTTTGTCTGTTACTCGTCCTATTGTTGCTTGGTAGACTTGCGTTTGACAA

mRNA sequence

TCTCGGAAAAATCCACAGAAATGGATTTCTTCTTCTTCGACAAAGCAGAGAAGCTTTCCACTCCCATTCCTCGCTGCAATCTCCTCCAAATCTTCTCCAAGTTCTTCCGTTTTCTAGAACTTTCCTTCCTCCTCCTCTCCCTCTCATGGATCTTCTCTCGCCTTCCCATCGCCCTCAGAATCTCCGCCGACTATTTCACTAAACTCTTCGCCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCTCAATTCTCACGCCCCGCCACTTCTGATCAAACCGATCGGATTTATGAAGACCTCATTGAAAAAACCGGAACCGGATCGGACTTAACTGATTCTGCCTCGGAGGAAGTGGAGGAGATTGTGTACCAGGACAAAGAAATCATTGCGGAGGGGAGGGTTGGTTCAAATTATTCAACCGATTGTGAAATTGAACTGAAGAACACGGATCTGGAGTCGGACTCGGGATTAGGTCACTCTAAAGTGATTTTGAGGAGTTTGTCGGAGAAACTTAACCGAGAATGTGTGAAAACGCAGAGTGAGAAGCTTCGACGATCGGAGACAGAGAAGTGCCGGAATCTGGAGTATTCGAATGACATTTTATATTACCAGGATGATTTGAGTAGTGAGGAATTTCAGAGAAAGATTGAGGCGTTTATAGCTAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTCCGCCATTGTTGTTCTTCATTGCGACGGTTAATCTTCCTGCTTAAAATTAGACGATTAAAAATTATTAGAAAAAAAAAAAAAGAAAAGAAAAAGAAGAAGAAGAAGAAGAAGAAAAATTGGCCGTACTAATTATGTTGGGCAATGTACAGAGTAAAATTTCTTTTACCTACAGAAGGGTAAAATTGGTATTTTAAATTCCTTCTTTTGTTAGATTGGGATTTTGTTTGTCTGTTACTCGTCCTATTGTTGCTTGGTAGACTTGCGTTTGACAA

Coding sequence (CDS)

ATGGATTTCTTCTTCTTCGACAAAGCAGAGAAGCTTTCCACTCCCATTCCTCGCTGCAATCTCCTCCAAATCTTCTCCAAGTTCTTCCGTTTTCTAGAACTTTCCTTCCTCCTCCTCTCCCTCTCATGGATCTTCTCTCGCCTTCCCATCGCCCTCAGAATCTCCGCCGACTATTTCACTAAACTCTTCGCCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCTCAATTCTCACGCCCCGCCACTTCTGATCAAACCGATCGGATTTATGAAGACCTCATTGAAAAAACCGGAACCGGATCGGACTTAACTGATTCTGCCTCGGAGGAAGTGGAGGAGATTGTGTACCAGGACAAAGAAATCATTGCGGAGGGGAGGGTTGGTTCAAATTATTCAACCGATTGTGAAATTGAACTGAAGAACACGGATCTGGAGTCGGACTCGGGATTAGGTCACTCTAAAGTGATTTTGAGGAGTTTGTCGGAGAAACTTAACCGAGAATGTGTGAAAACGCAGAGTGAGAAGCTTCGACGATCGGAGACAGAGAAGTGCCGGAATCTGGAGTATTCGAATGACATTTTATATTACCAGGATGATTTGAGTAGTGAGGAATTTCAGAGAAAGATTGAGGCGTTTATAGCTAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTCCGCCATTGTTGTTCTTCATTGCGACGGTTAA

Protein sequence

MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFTKLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

Homology

[Close]

BLAST of MELO3C016396.jh1 vs. NCBI nr
Match: XP_008452094.1 (PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 467 bits (1201), Expect = 2.00e-165
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
           MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
           SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 247
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of MELO3C016396.jh1 vs. NCBI nr
Match: KAA0044789.1 (putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 459 bits (1182), Expect = 1.58e-162
Identity = 244/247 (98.79%), Postives = 244/247 (98.79%), Query Frame = 0


Query: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
           MDFFFFDKAEKLSTPIPRCNLLQIFSKFFR LELSFLLLSLSWIFSRLPIALRISADYFT
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIE TGTGSDLTDSA
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIENTGTGSDLTDSA 120

Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
           SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGL HSKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 247
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of MELO3C016396.jh1 vs. NCBI nr
Match: XP_011653156.1 (uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical protein Csa_015101 [Cucumis sativus])

HSP 1 Score: 426 bits (1094), Expect = 3.93e-149
Identity = 230/247 (93.12%), Postives = 238/247 (96.36%), Query Frame = 0


Query: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
           MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISA+Y T
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSR  TS+ T RIYEDLI+KTGTGSDLTDSA
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSE-THRIYEDLIDKTGTGSDLTDSA 120

Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
           SEEVEEIVYQDK+IIAEGRVGSNYSTDCEIE+KNTDLES+SGLG SKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKT+SEKLRRSETEKC NLE +NDIL YQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 247
           VVLHCDG
Sbjct: 241 VVLHCDG 246

[Close]

BLAST of MELO3C016396.jh1 vs. NCBI nr
Match: XP_038888396.1 (uncharacterized protein LOC120078241 [Benincasa hispida])

HSP 1 Score: 374 bits (959), Expect = 1.49e-128
Identity = 208/253 (82.21%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
           MDFFFFDKAEK+S PIPRCNLLQIF+KFFRFLELSFLLL LSWI SRLPIAL +SA+YF 
Sbjct: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSD------QTDRIYEDLIEKTGTGS 120
           KLFAF+ATPLFGFLLCNAIIVALVAKP+QF RPA+S       + DRIYEDLIEKTG+G 
Sbjct: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG- 120

Query: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLS 180
           DLTDS SEEVE IVYQDK+IIAEG      S D EIE+KNTDLE++SGLGHSKV+LR+LS
Sbjct: 121 DLTDSLSEEVE-IVYQDKQIIAEGI----NSIDREIEVKNTDLETESGLGHSKVMLRTLS 180

Query: 181 EKLNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRR 240
           EKLNRECV T+ EKLRRSETEKCRNLE+SNDILY+QDDLSSEEFQRKIEAFIAKEKKFRR
Sbjct: 181 EKLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRR 240

Query: 241 EESSAIVVLHCDG 247
           EESSAIVVLHCDG
Sbjct: 241 EESSAIVVLHCDG 247

[Close]

BLAST of MELO3C016396.jh1 vs. NCBI nr
Match: XP_022136879.1 (uncharacterized protein LOC111008461, partial [Momordica charantia])

HSP 1 Score: 303 bits (777), Expect = 7.02e-101
Identity = 182/253 (71.94%), Postives = 208/253 (82.21%), Query Frame = 0


Query: 1   MDFFFFDKAEKLSTPIPR--CNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADY 60
           MDFFFFDKAEK  T IPR  CNLLQIF+K FRFLEL  LL+ LSWI SRLP A+RIS +Y
Sbjct: 1   MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60

Query: 61  FTKLFAFIATPLFGFLLCNAIIVALVAKPSQFS--RPATSD--QTDRIYEDLIEKTGTGS 120
           FTKLFAF+A+PLFGF+LCNAIIVALVAKPSQ S  R A  D  +TDR+YEDLI K+G G 
Sbjct: 61  FTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNG- 120

Query: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLS 180
           DL +S SE+ E IV+QDKEIIAE    +  S D ++E+K+TD E++SG+ H KVI R+LS
Sbjct: 121 DLPESPSEDGE-IVFQDKEIIAE----AINSIDRDVEVKSTDPEAESGIDHPKVIRRTLS 180

Query: 181 EKLNRECVKTQSEKLRRSETEKCRN-LEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFR 240
           EK+ REC KTQSEKLRRSETEKCRN LE S+DI+YYQDDLSSEEFQRKIEAFIA+EKKFR
Sbjct: 181 EKIKRECSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFR 240

Query: 241 REESSAIVVLHCD 246
           REESSAIV LH D
Sbjct: 241 REESSAIV-LHSD 246

[Close]

BLAST of MELO3C016396.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CYU3 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005060 PE=4 SV=1)

HSP 1 Score: 467 bits (1201), Expect = 9.70e-166
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
           MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
           SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 247
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of MELO3C016396.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BT40 (uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=4 SV=1)

HSP 1 Score: 467 bits (1201), Expect = 9.70e-166
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
           MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
           SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 247
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of MELO3C016396.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TU70 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00800 PE=4 SV=1)

HSP 1 Score: 459 bits (1182), Expect = 7.64e-163
Identity = 244/247 (98.79%), Postives = 244/247 (98.79%), Query Frame = 0


Query: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
           MDFFFFDKAEKLSTPIPRCNLLQIFSKFFR LELSFLLLSLSWIFSRLPIALRISADYFT
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIE TGTGSDLTDSA
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIENTGTGSDLTDSA 120

Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
           SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGL HSKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 247
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of MELO3C016396.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KY10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1)

HSP 1 Score: 426 bits (1094), Expect = 1.90e-149
Identity = 230/247 (93.12%), Postives = 238/247 (96.36%), Query Frame = 0


Query: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60
           MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISA+Y T
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSR  TS+ T RIYEDLI+KTGTGSDLTDSA
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSE-THRIYEDLIDKTGTGSDLTDSA 120

Query: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180
           SEEVEEIVYQDK+IIAEGRVGSNYSTDCEIE+KNTDLES+SGLG SKVILRSLSEKLNRE
Sbjct: 121 SEEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKT+SEKLRRSETEKC NLE +NDIL YQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 247
           VVLHCDG
Sbjct: 241 VVLHCDG 246

[Close]

BLAST of MELO3C016396.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C5K3 (uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008461 PE=4 SV=1)

HSP 1 Score: 303 bits (777), Expect = 3.40e-101
Identity = 182/253 (71.94%), Postives = 208/253 (82.21%), Query Frame = 0


Query: 1   MDFFFFDKAEKLSTPIPR--CNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADY 60
           MDFFFFDKAEK  T IPR  CNLLQIF+K FRFLEL  LL+ LSWI SRLP A+RIS +Y
Sbjct: 1   MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60

Query: 61  FTKLFAFIATPLFGFLLCNAIIVALVAKPSQFS--RPATSD--QTDRIYEDLIEKTGTGS 120
           FTKLFAF+A+PLFGF+LCNAIIVALVAKPSQ S  R A  D  +TDR+YEDLI K+G G 
Sbjct: 61  FTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNG- 120

Query: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLS 180
           DL +S SE+ E IV+QDKEIIAE    +  S D ++E+K+TD E++SG+ H KVI R+LS
Sbjct: 121 DLPESPSEDGE-IVFQDKEIIAE----AINSIDRDVEVKSTDPEAESGIDHPKVIRRTLS 180

Query: 181 EKLNRECVKTQSEKLRRSETEKCRN-LEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFR 240
           EK+ REC KTQSEKLRRSETEKCRN LE S+DI+YYQDDLSSEEFQRKIEAFIA+EKKFR
Sbjct: 181 EKIKRECSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFR 240

Query: 241 REESSAIVVLHCD 246
           REESSAIV LH D
Sbjct: 241 REESSAIV-LHSD 246

[Close]

BLAST of MELO3C016396.jh1 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-28
Identity = 97/253 (38.34%), Postives = 142/253 (56.13%), Query Frame = 0


Query: 1   MDFFFFD--KAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADY 60
           MD F FD  KAEK +  + R N      +FFR  E+   LL + W FS+LP  ++IS  +
Sbjct: 1   MDSFDFDNVKAEK-AKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAF 60

Query: 61  FTKLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTD 120
             ++ A I+TPLF FLL N+I+V L+ K S  +  A +     IY+  +      S  +D
Sbjct: 61  LRRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTTTAVASAETEIYQAFVRSVENRSKPSD 120

Query: 121 SASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLN 180
              +  E IVY DK++I    + SN +   +  + + +++SDS   HSKV  RS S+   
Sbjct: 121 --EDLTEGIVYDDKQVIVTD-LDSNPNLTVDENMPHVEIDSDSS-PHSKVYGRSKSDVSG 180

Query: 181 RE----CVKTQSEKLRRSETEK-CRNLEYSNDI----LYYQDDLSSEEFQRKIEAFIAKE 240
           ++     +      L+RSETEK C+  E  +D      Y +DDLS+EEFQ+ IEAFIAK+
Sbjct: 181 KQSSNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQ 240

Query: 241 KKFRREESSAIVV 243
           + FRR+ES A+VV
Sbjct: 241 RMFRRQESLAVVV 248

[Close]

BLAST of MELO3C016396.jh1 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.8e-09
Identity = 68/245 (27.76%), Postives = 116/245 (47.35%), Query Frame = 0


Query: 8   KAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFTKLFAFIA 67
           K EK S  I     ++ F+  FR  EL  L++ +S +    P +++IS D F +   F+ 
Sbjct: 10  KMEK-SRGILNFQAIRSFTSLFRLFELLLLVILISKL--SFP-SVKISGDIFKEAAVFLV 69

Query: 68  TPLFGFLLCNAIIVALVAKPSQF------SRPATSDQTDRIYEDLIEKTGTGSDLTDSAS 127
           +P F F + NAI++ L+AK  ++      S+ AT   ++ +Y++ + K           S
Sbjct: 70  SPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHK-----------S 129

Query: 128 EEVEEIVY-----QDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEK 187
           E+ + +VY     Q K+     RV    S   +       LES +G    K + R +SEK
Sbjct: 130 EKKKPVVYATKTEQLKKPSGGKRVSFGRSQSHKAFEAVKPLESTNG---EKNMKRYVSEK 189

Query: 188 LNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREE 242
             R C   +   +R  + E               D +S+E+F+ KIEAFIA++K+ +++E
Sbjct: 190 HMRVCDSDKKVVVRVKKPE---------------DGMSNEQFRTKIEAFIARQKRIQKDE 221

The following BLAST results are available for this feature:

BLAST of MELO3C016396.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452094.1	2.00e-165	100.00	PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putat...	[more]
KAA0044789.1	1.58e-162	98.79	putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [C...	[more]
XP_011653156.1	3.93e-149	93.12	uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical ...	[more]
XP_038888396.1	1.49e-128	82.21	uncharacterized protein LOC120078241 [Benincasa hispida]	[more]
XP_022136879.1	7.02e-101	71.94	uncharacterized protein LOC111008461, partial [Momordica charantia]	[more]

BLAST of MELO3C016396.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C016396.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CYU3	9.70e-166	100.00	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A1S3BT40	9.70e-166	100.00	uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=...	[more]
A0A5A7TU70	7.64e-163	98.79	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A0A0KY10	1.90e-149	93.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1	[more]
A0A6J1C5K3	3.40e-101	71.94	uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of MELO3C016396.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66440.1	1.3e-28	38.34	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G34560.1	3.8e-09	27.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33640:SF3	TRNA-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6MTASE SUBUNIT	coord: 8..244
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 8..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016396.jh1.t1	MELO3C016396.jh1.t1	mRNA