MELO3C015781.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C015781.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 28962378 .. 28962615 (-)
Sequence length238
RNA-Seq ExpressionMELO3C015781.1
SyntenyMELO3C015781.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGGAGGAGGAGGATGAGAAGAAGAAGAAGAATGGAGAGTGGGAGATTGAAAGCCGGTGATCTTTTTAAGGGAAAAGTGGGATTTGGAAGGAGGGCCAGGCATGGAAGGGATGAACGGAGCAGAAGAAAAGAGAAAAGAGGGAGAAGAAAAAGGGAAATGGGGTTTGTTGAAAATGGAAAAGCGAGGAGTAGTGCTTTGGGTTTATTTATAGACAGGAGTTGTGGGGGATAA

mRNA sequence

ATGGAGGAGGAGGAGGAGGATGAGAAGAAGAAGAAGAATGGAGAGTGGGAGATTGAAAGCCGGTGATCTTTTTAAGGGAAAAGTGGGATTTGGAAGGAGGGCCAGGCATGGAAGGGATGAACGGAGCAGAAGAAAAGAGAAAAGAGGGAGAAGAAAAAGGGAAATGGGGTTTGTTGAAAATGGAAAAGCGAGGAGTAGTGCTTTGGGTTTATTTATAGACAGGAGTTGTGGGGGATAA

Coding sequence (CDS)

ATGAGAAGAAGAAGAAGAATGGAGAGTGGGAGATTGAAAGCCGGTGATCTTTTTAAGGGAAAAGTGGGATTTGGAAGGAGGGCCAGGCATGGAAGGGATGAACGGAGCAGAAGAAAAGAGAAAAGAGGGAGAAGAAAAAGGGAAATGGGGTTTGTTGAAAATGGAAAAGCGAGGAGTAGTGCTTTGGGTTTATTTATAGACAGGAGTTGTGGGGGATAA

Protein sequence

MRRRRRMESGRLKAGDLFKGKVGFGRRARHGRDERSRRKEKRGRRKREMGFVENGKARSSALGLFIDRSCGG
Homology
[Close]
BLAST of MELO3C015781.1 vs. NCBI nr
Match: KAE8646300.1 (hypothetical protein Csa_016236 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 2.2e-07
Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0 

Query: 1  MRRRRRMESGRLKAGDLFKGKVGFGRRARHGRDERSRRKEKRGRRKRE 49
          +RRRRR E GRLKAGDLFKGK GFGRRA  G DERSRRKEKR +RK E
Sbjct: 39 VRRRRRRERGRLKAGDLFKGKAGFGRRASDGWDERSRRKEKREKRKEE 86

[Close]
BLAST of MELO3C015781.1 vs. ExPASy TrEMBL
Match: A0A0A0KAD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G379090 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07
Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0 

Query: 1  MRRRRRMESGRLKAGDLFKGKVGFGRRARHGRDERSRRKEKRGRRKRE 49
          +RRRRR E GRLKAGDLFKGK GFGRRA  G DERSRRKEKR +RK E
Sbjct: 28 VRRRRRRERGRLKAGDLFKGKAGFGRRASDGWDERSRRKEKREKRKEE 75

The following BLAST results are available for this feature:
BLAST of MELO3C015781.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646300.12.2e-0779.17hypothetical protein Csa_016236 [Cucumis sativus][more]
BLAST of MELO3C015781.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C015781.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAD71.1e-0779.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G379090 PE=4 SV=1[more]
BLAST of MELO3C015781.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..45

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C015781MELO3C015781gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C015781.1:exon:31468MELO3C015781.1:exon:31468exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C015781.1:cdsMELO3C015781.1:cdsCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C015781.1:five_prime_utrMELO3C015781.1:five_prime_utrfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C015781.1MELO3C015781.1-proteinpolypeptide