MELO3C015781 (gene) Melon (DHL92) v4

Overview


Name	MELO3C015781
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 28962378 .. 28962615 (-)
RNA-Seq Expression	MELO3C015781
Synteny	MELO3C015781

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGGAGGAGGAGGATGAGAAGAAGAAGAAGAATGGAGAGTGGGAGATTGAAAGCCGGTGATCTTTTTAAGGGAAAAGTGGGATTTGGAAGGAGGGCCAGGCATGGAAGGGATGAACGGAGCAGAAGAAAAGAGAAAAGAGGGAGAAGAAAAAGGGAAATGGGGTTTGTTGAAAATGGAAAAGCGAGGAGTAGTGCTTTGGGTTTATTTATAGACAGGAGTTGTGGGGGATAA

mRNA sequence

ATGGAGGAGGAGGAGGAGGATGAGAAGAAGAAGAAGAATGGAGAGTGGGAGATTGAAAGCCGGTGATCTTTTTAAGGGAAAAGTGGGATTTGGAAGGAGGGCCAGGCATGGAAGGGATGAACGGAGCAGAAGAAAAGAGAAAAGAGGGAGAAGAAAAAGGGAAATGGGGTTTGTTGAAAATGGAAAAGCGAGGAGTAGTGCTTTGGGTTTATTTATAGACAGGAGTTGTGGGGGATAA

Coding sequence (CDS)

ATGAGAAGAAGAAGAAGAATGGAGAGTGGGAGATTGAAAGCCGGTGATCTTTTTAAGGGAAAAGTGGGATTTGGAAGGAGGGCCAGGCATGGAAGGGATGAACGGAGCAGAAGAAAAGAGAAAAGAGGGAGAAGAAAAAGGGAAATGGGGTTTGTTGAAAATGGAAAAGCGAGGAGTAGTGCTTTGGGTTTATTTATAGACAGGAGTTGTGGGGGATAA

Protein sequence

MRRRRRMESGRLKAGDLFKGKVGFGRRARHGRDERSRRKEKRGRRKREMGFVENGKARSSALGLFIDRSCGG

Homology

[Close]

BLAST of MELO3C015781 vs. NCBI nr
Match: KAE8646300.1 (hypothetical protein Csa_016236 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 2.2e-07
Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 1  MRRRRRMESGRLKAGDLFKGKVGFGRRARHGRDERSRRKEKRGRRKRE 49
          +RRRRR E GRLKAGDLFKGK GFGRRA  G DERSRRKEKR +RK E
Sbjct: 39 VRRRRRRERGRLKAGDLFKGKAGFGRRASDGWDERSRRKEKREKRKEE 86

[Close]

BLAST of MELO3C015781 vs. ExPASy TrEMBL
Match: A0A0A0KAD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G379090 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07
Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 1  MRRRRRMESGRLKAGDLFKGKVGFGRRARHGRDERSRRKEKRGRRKRE 49
          +RRRRR E GRLKAGDLFKGK GFGRRA  G DERSRRKEKR +RK E
Sbjct: 28 VRRRRRRERGRLKAGDLFKGKAGFGRRASDGWDERSRRKEKREKRKEE 75

The following BLAST results are available for this feature:

BLAST of MELO3C015781 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646300.1	2.2e-07	79.17	hypothetical protein Csa_016236 [Cucumis sativus]	[more]

BLAST of MELO3C015781 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C015781 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAD7	1.1e-07	79.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G379090 PE=4 SV=1	[more]

BLAST of MELO3C015781 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015781.1	MELO3C015781.1	mRNA