MELO3C013722.1 (mRNA) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGGGAGTCGGTTTCGTTAAAGAGAGGGAGAGATAAATCGCGATATCAATTGAAACTCCGGGTTTAGGCGGGATTTCAAAAATCTTTTGCCATGTCATCGATCCTCGTCCTTTTTTCTCATTGGCTACTCTTCGTCTCTTCACATTTGCTTTCCGCTCTTTTGTGTTTCCTTTGTGTGTTATTTGCAATTTCCTCGCTGTGAATTGTTCCCTCTCAACAGATCCGGACACGTGAGTTAAAGCCCGTTGTTTGAATGCGAAATCACCAGTTTACCCCTCCCTTCCTACAACTCGTCCCTTCCTTAGTGCGGAACTTATCACAATAAACGTGATAAAACGATTAACGCGTCGTTGAGGTAATCATTGATCTCACTACTCAGGGGTATTTTCGTAACTTGGTTCCCTTTCCTAAGATATTTGTAACTACAACGCAGCGTTTTGATTCTCCACTAATTGGGCTGGGCTTTTCGTTTTTTTGGGCCTTAGGTTTTGAGAGACCTTTTATTGAAGCCCCTTTGATGATATTCGTAGCCCAATTACGATCTTCCAGAATAACCTCCGTCGAATTGCGACGATGAACGGAGTTTCTTTGTTTGATTAATTCACCGTTGTGGCAGAAAAGTCCTCTGGAAATGGAAATGGAAGCGGAAGGAATCGTAGAGCATGGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGTTCGCCTTTTCGTTTGATTTTCTTTTTTCCGTCGGAATTTTTTTCGTGTTTGTATTTTCCATCATTCCGTTTGTTTTTCAATCCAAAGCTTGTTATTTATAGTTGAAAATTTTGAGGTTTGGGCTGTAGCGCGTTTCAGTATTTCGTTGACAGACTTGAGAATGCAATATACCTAACTGTGTGCTTCGTTAAGTTTACGATATTGAATTGAAGACATTTGATTTGATTAGTTTAGGGACGTGATGCATTTAATGTGGAGATCTATTGACATTTTCAGTTTTAATGTCTGGGAATTTGCTATGTTATAATTGTTATCGTTCAATCTTGTCAACTTGTTTGTTTTGAAACAATCATGTTTCCATCATGCATGTACTTTTCAGGGAGGTTCCAACAGCCAGGTGGAATTGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCTAGCACCTTATCTCAGTAAGTAGTATTTTCCAGCTCGATTCAGCATTAGACACTGTTAATTCGGCTCAAATCATCTTACAAAAAAAAAAGGCTCAAATCATTCATTCTATATGATTGTTTGCAACTGTTATGGCTGTCATGGGGATCGTATTCATTTGCTTTTATGTTCTTGTAGACCGTCTACATTTGCACAGGCTGCAAAGCTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTGTGAGGCTATACTTAATTCATCCCCCGATATTCAAATATTCCTTTAATTTTTTTTTTAAACTAATGAGTTGCTGAGAGAATACTGTGAAATGCTTTATACCTCTTCTCATCAATAACGTACCAAAGAAATGTTATGTATATTGTAGCAAGTTGAAAGCAACTTCTCGTTGGTAAAATCGGTCTTCTTCTAGGAATCATGGTAAATGTACTACATTAGGCGTTAACACATGCAAATGGGAGAAGATGATTTAATCTATTGTGAATGATTGAAACTGCTCCATGCTTAAAGTTCTGCATCCAACTAATATAGGATGTTGATGTAAATGAATTCATGTAGTTGCACCTTGACAACATGTGGAGTGGGGGGAAAAACCTCTGATCTTGAGGTCAATAGTCTTATGCCAGTTTTTCTCAAATCTAATATCACCCCCTATTCTAACTAAAATGTTGTTTGTGTCATAGTTATAGTACTTAACTTTTGCAATTTTTCATGACTGTATCTATTTCTTTGGGCTCATTAAATCACATTTCTCCTTTGGCCCATGTTAAATGCCAATTTTGATATGGGGCTTTACTAAGGTTATACATTTTCAATTGTTCGTTCCAAGTTATCCAACTAGTGAGAGTAATTCTTATGTTGTCTAAAAGGCCAATATCACTCAATATACGTCAAAATATAAGAGCAATAAAATAGCCTTATTTATCATTATAGCCTAGCCTCAACTTCTGTTCATCTTATTTCAGTTGTTTTCTCCCATTGATTACTTTTCTTCCCTTTGTGTACTACTTATTAAGATGCTTCGGATTACACTTTCAATTCAATTTGAATGACATTGCTGCCAGATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGATATCGAAGGTATTATGTTCTACTAAATGTTCTGAGAAATGTGTCTATATGTTGGCAGTTTTTTTTAAAAAAAATTTATCTTGTGGTCATGTAGGTTATTATATATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGTAATCACTCTCATCACAAGCATAATTTCTGAAGAACAATTAAAAATATGTCATTTGATTTACAATTTTAAATATCAGTGTCTTGATGAATCCCCCTACTGCAGGGAAATTTTTATCTTGGAAGGCTGGAGGTACCGTAAATGATTATGTGAAGGTAGAATTCTCATTTATTTGCATATAACCTCATCGATCATAGTGCATTTATTTTATTTCTTGAGCATAAACATAACACCACTTTCACTCAAACAAATGATATTTATATGGTCAGCAAACCTCCAATACAATAGGATAGAATTTGGAATATGGGGTATATTGAGGGTGCAGTACAGTTGTGGCTTATGTTTAGCGTGGAATGAATGTTCAGTTTCGATTGAGGAGGTGCTCCTAGGTTTGCCAATTTGGAAGGAAGGCAAAGTTTTGTGGCACACTAGTTTCTTTGCTATCTTCAATCCTGTGGGGGGTTTGGCTTGAGAGAAACAATAGGATTTCTTAGAGAGATCCTGTGGGGGGCGGCCTTGTGTGGGAGGAGATGAGGTTTAACACCTAGTTGAGGGCATTGATCACTGGACTTTTTTGTAATTTCTTGGATTGGTAGTGATTTTTGGATTGGATGCCCTTGTTGTAGGTTTTCTTGGACTTTTTTTATTTTTCTTGGCCATGGTTTTCTTGTTGAAATCTCGGATTCTTACCAAAGAATAAAAACTGTAGCAGTAAAACGTTGGGGAAGGTTTAAACAGTGATTTGTTATAAATAGAATGAGTGCAAAAAGTTAAATATATCTATTATTTTGTTGGATTAGTGCTTGAGTAGTCTCAATAACTAACTAAGAGGTCATGGGTTCAATCCACAGTTGTTCTGTGACATTAGTCGAGGTGTGCATAAGCTATTTCGTGCACTCACAGATTAAAAGAAAAAAAAAGATTAAGGCTTGAGTAGGGAAGATTCTCCGAACCTCAAATACTAGAGGGTGTTATATTTTATATTAGCAAGCTACTTATAATAACATGAAATGACTATCTATCACCACAATCATGGCTGCACAAATGAGAGTATGGTGATTCGTAGGTAAATTTTAATGATGAACTGCAGGTTGGGATTATACCGTGGTTGATACTGTCGACAAGGGTTAGCAAGTTTGTATGTCAAGTGGTGAAGTAAAAAAAGGGGATTGAAGGAAATTGTGATGAAGAATGAGTGATACATCGCCACATGCTATGTACAATATTTGGCAACCAATATTTTCCTAAAATTATAGTGAGGGGAGGCTGGAGAAGTTTTTACAGCCCCACCACTCTTTCTTCTTGTAAGGTTCAGCATTGTTGTTGTTTTCCTTTTCTTTTTCCCCCATATATTTTCCCTTTCATTCCTTTTTTTTTTGGGGGAAACTCTTTGTCTTAGGTATCATTTATTGTTGTTATTTTTTGCTTAGAATTAAGATATTCTCTCTCTATATATATATAGATTGGTTGCCTGTATGCTTAGGGTAAGGGAAGGTTCAATCCTCAATCTTCACAAATGTTAGTGCCAAAAAAAATGAGGTATATCTAAGTGCATATAAATTACATTGAAAATACAATAGATGTGATAATACATTGTTTCATATAAGTTTTGGTACATCGGTTAAAAGTCATCTCATATTTGATAAAATT AAGGGAGTCGGTTTCGTTAAAGAGAGGGAGAGATAAATCGCGATATCAATTGAAACTCCGGGTTTAGGCGGGATTTCAAAAATCTTTTGCCATGTCATCGATCCTCGTCCTTTTTTCTCATTGGCTACTCTTCGTCTCTTCACATTTGCTTTCCGCTCTTTTGTGTTTCCTTTGTGTGTTATTTGCAATTTCCTCGCTGTGAATTGTTCCCTCTCAACAGATCCGGACACGTGAGTTAAAGCCCGTTGTTTGAATGCGAAATCACCAGTTTACCCCTCCCTTCCTACAACTCGTCCCTTCCTTAGTGCGGAACTTATCACAATAAACGTGATAAAACGATTAACGCGTCGTTGAGGTAATCATTGATCTCACTACTCAGGGGTATTTTCGTAACTTGGTTCCCTTTCCTAAGATATTTGTAACTACAACGCAGCGTTTTGATTCTCCACTAATTGGGCTGGGCTTTTCGTTTTTTTGGGCCTTAGGTTTTGAGAGACCTTTTATTGAAGCCCCTTTGATGATATTCGTAGCCCAATTACGATCTTCCAGAATAACCTCCGTCGAATTGCGACGATGAACGGAGTTTCTTTGTTTGATTAATTCACCGTTGTGGCAGAAAAGTCCTCTGGAAATGGAAATGGAAGCGGAAGGAATCGTAGAGCATGGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGGAGGTTCCAACAGCCAGGTGGAATTGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCTAGCACCTTATCTCAACCGTCTACATTTGCACAGGCTGCAAAGCTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTGTTGGGATTATACCGTGGTTGATACTGTCGACAAGGGTTAGCAAGTTTGTATGTCAAGTGGTGAAGTAAAAAAAGGGGATTGAAGGAAATTGTGATGAAGAATGAGTGATACATCGCCACATGCTATGTACAATATTTGGCAACCAATATTTTCCTAAAATTATAGTGAGGGGAGGCTGGAGAAGTTTTTACAGCCCCACCACTCTTTCTTCTTGTAAGGTTCAGCATTGTTGTTGTTTTCCTTTTCTTTTTCCCCCATATATTTTCCCTTTCATTCCTTTTTTTTTTGGGGGAAACTCTTTGTCTTAGGTATCATTTATTGTTGTTATTTTTTGCTTAGAATTAAGATATTCTCTCTCTATATATATATAGATTGGTTGCCTGTATGCTTAGGGTAAGGGAAGGTTCAATCCTCAATCTTCACAAATGTTAGTGCCAAAAAAAATGAGGTATATCTAAGTGCATATAAATTACATTGAAAATACAATAGATGTGATAATACATTGTTTCATATAAGTTTTGGTACATCGGTTAAAAGTCATCTCATATTTGATAAAATT ATGGAAATGGAAGCGGAAGGAATCGTAGAGCATGGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGGAGGTTCCAACAGCCAGGTGGAATTGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCTAGCACCTTATCTCAACCGTCTACATTTGCACAGGCTGCAAAGCTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTGTTGGGATTATACCGTGGTTGATACTGTCGACAAGGGTTAG MEMEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANCWDYTVVDTVDKG Homology
BLAST of MELO3C013722.1 vs. NCBI nr
Match: XP_008448478.1 (PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]) HSP 1 Score: 169.1 bits (427), Expect = 2.0e-38 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of MELO3C013722.1 vs. NCBI nr
Match: XP_022923433.1 (uncharacterized protein LOC111431128 [Cucurbita moschata] >KAG6577814.1 Guided entry of tail-anchored proteins factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015853.1 Tail-anchored protein insertion receptor WRB [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154.8 bits (390), Expect = 3.9e-34 Identity = 82/89 (92.13%), Postives = 84/89 (94.38%), Query Frame = 0
BLAST of MELO3C013722.1 vs. NCBI nr
Match: XP_023552250.1 (uncharacterized protein LOC111809975 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 154.1 bits (388), Expect = 6.6e-34 Identity = 81/89 (91.01%), Postives = 84/89 (94.38%), Query Frame = 0
BLAST of MELO3C013722.1 vs. NCBI nr
Match: XP_004146176.1 (uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hypothetical protein Csa_010199 [Cucumis sativus]) HSP 1 Score: 154.1 bits (388), Expect = 6.6e-34 Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of MELO3C013722.1 vs. NCBI nr
Match: XP_023007643.1 (uncharacterized protein LOC111500212 [Cucurbita maxima]) HSP 1 Score: 153.3 bits (386), Expect = 1.1e-33 Identity = 82/88 (93.18%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of MELO3C013722.1 vs. ExPASy Swiss-Prot
Match: Q1H5D2 (Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 6.7e-21 Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of MELO3C013722.1 vs. ExPASy TrEMBL
Match: A0A1S3BKE1 (uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 9.7e-39 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of MELO3C013722.1 vs. ExPASy TrEMBL
Match: A0A6J1E9M6 (uncharacterized protein LOC111431128 OS=Cucurbita moschata OX=3662 GN=LOC111431128 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34 Identity = 82/89 (92.13%), Postives = 84/89 (94.38%), Query Frame = 0
BLAST of MELO3C013722.1 vs. ExPASy TrEMBL
Match: A0A0A0L4T9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.2e-34 Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of MELO3C013722.1 vs. ExPASy TrEMBL
Match: A0A6J1L884 (uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.5e-34 Identity = 82/88 (93.18%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of MELO3C013722.1 vs. ExPASy TrEMBL
Match: A0A6J1I7A9 (uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.3e-30 Identity = 75/87 (86.21%), Postives = 79/87 (90.80%), Query Frame = 0
BLAST of MELO3C013722.1 vs. TAIR 10
Match: AT4G16444.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 101.3 bits (251), Expect = 4.8e-22 Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|