MELO3C009470.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AAAACCAAAACCACAAATTTTTCCCCAACTACAAATCCAACCTCTCTAATTTCTCCACTTGTACTCTTTCTTGCTGCTACTTCTTCTTCTTTTTCTTCTTCACTGTTCAAACCCCTTCCATGGCGGACGGAGCTGGAGTATTTTAGGGTTTGTTTTTCTTTATTCTTTTTTTCAAGCGAGTTCGTGCGGAAGATGGATGTTCATGTCACCGGTTCTTGTCTTCATCAATATTCTCTTCCTCCACCGCCATTTGAGGCTGTGGAAGCTCCGCCCCCTCAGAAAGAAGGAACCGAACAGGAACTTGACTCTCTGGTTACGAGTTTAGGTGGATGTCGCGACGGAGAAAAAGGGTCGGAATCGGATGTGCAGGAGGACGACGGAGCGGAAATGGAGGTCGCGGCCACGGTGTCGAAGAAGGAGGAGGAGGAAGGTGGACGGGAGAGGCTGAAGAGGCATCGGCGAGAGATGGCTGGTCGGGTCTGGATACCGGAGATATGGGGACAAGAGGAGCTTCTGAAGGATTGGATCGATTGCTCCGCCTTCGATGCTTGTTTATTTCCGACCGGAATCGGATCGGCGAGGGCGGCGCTGGTTGAAGAAAGACGGAGGGCCAACAATGGCGGACTCACGCTGGAGAACAGGTGCTGATTTTTTTTTTTTTTTTTACGGTGGGGTAAATTAATTGCAATAAAATGAAAAATGAAACAAAAAAGAAAAAGGAAATTCATTTCCCAAGCTCTGAATATTAATTTTTCCAATATGCGGGGGAGATGATTTTGAATGGAAAATTATCAAACAAAACTGAAATTCTTTTGTTTTGTCTATGGCTTCTCTCTTTCATTCGCCATTTGATTTTCCATTTCTTTTTTGTTAGTTAATACAATCATGAATTCTCCATGATA AAAACCAAAACCACAAATTTTTCCCCAACTACAAATCCAACCTCTCTAATTTCTCCACTTGTACTCTTTCTTGCTGCTACTTCTTCTTCTTTTTCTTCTTCACTGTTCAAACCCCTTCCATGGCGGACGGAGCTGGAGTATTTTAGGGTTTGTTTTTCTTTATTCTTTTTTTCAAGCGAGTTCGTGCGGAAGATGGATGTTCATGTCACCGGTTCTTGTCTTCATCAATATTCTCTTCCTCCACCGCCATTTGAGGCTGTGGAAGCTCCGCCCCCTCAGAAAGAAGGAACCGAACAGGAACTTGACTCTCTGGTTACGAGTTTAGGTGGATGTCGCGACGGAGAAAAAGGGTCGGAATCGGATGTGCAGGAGGACGACGGAGCGGAAATGGAGGTCGCGGCCACGGTGTCGAAGAAGGAGGAGGAGGAAGGTGGACGGGAGAGGCTGAAGAGGCATCGGCGAGAGATGGCTGGTCGGGTCTGGATACCGGAGATATGGGGACAAGAGGAGCTTCTGAAGGATTGGATCGATTGCTCCGCCTTCGATGCTTGTTTATTTCCGACCGGAATCGGATCGGCGAGGGCGGCGCTGGTTGAAGAAAGACGGAGGGCCAACAATGGCGGACTCACGCTGGAGAACAGGTGCTGATTTTTTTTTTTTTTTTTACGGTGGGGTAAATTAATTGCAATAAAATGAAAAATGAAACAAAAAAGAAAAAGGAAATTCATTTCCCAAGCTCTGAATATTAATTTTTCCAATATGCGGGGGAGATGATTTTGAATGGAAAATTATCAAACAAAACTGAAATTCTTTTGTTTTGTCTATGGCTTCTCTCTTTCATTCGCCATTTGATTTTCCATTTCTTTTTTGTTAGTTAATACAATCATGAATTCTCCATGATA ATGGATGTTCATGTCACCGGTTCTTGTCTTCATCAATATTCTCTTCCTCCACCGCCATTTGAGGCTGTGGAAGCTCCGCCCCCTCAGAAAGAAGGAACCGAACAGGAACTTGACTCTCTGGTTACGAGTTTAGGTGGATGTCGCGACGGAGAAAAAGGGTCGGAATCGGATGTGCAGGAGGACGACGGAGCGGAAATGGAGGTCGCGGCCACGGTGTCGAAGAAGGAGGAGGAGGAAGGTGGACGGGAGAGGCTGAAGAGGCATCGGCGAGAGATGGCTGGTCGGGTCTGGATACCGGAGATATGGGGACAAGAGGAGCTTCTGAAGGATTGGATCGATTGCTCCGCCTTCGATGCTTGTTTATTTCCGACCGGAATCGGATCGGCGAGGGCGGCGCTGGTTGAAGAAAGACGGAGGGCCAACAATGGCGGACTCACGCTGGAGAACAGGTGCTGA MDVHVTGSCLHQYSLPPPPFEAVEAPPPQKEGTEQELDSLVTSLGGCRDGEKGSESDVQEDDGAEMEVAATVSKKEEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAALVEERRRANNGGLTLENRC Homology
BLAST of MELO3C009470.jh1.t1 vs. NCBI nr
Match: XP_008442840.1 (PREDICTED: uncharacterized protein LOC103486607 [Cucumis melo] >KAA0043885.1 protein BIC1-like [Cucumis melo var. makuwa] >TYK25252.1 protein BIC1-like [Cucumis melo var. makuwa]) HSP 1 Score: 297 bits (760), Expect = 2.74e-101 Identity = 149/156 (95.51%), Postives = 150/156 (96.15%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. NCBI nr
Match: XP_011652011.2 (uncharacterized protein LOC105434972 [Cucumis sativus] >KAE8651089.1 hypothetical protein Csa_001819 [Cucumis sativus]) HSP 1 Score: 275 bits (703), Expect = 1.01e-90 Identity = 142/157 (90.45%), Postives = 146/157 (92.99%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. NCBI nr
Match: XP_038903496.1 (protein BIC1 [Benincasa hispida]) HSP 1 Score: 253 bits (647), Expect = 6.29e-84 Identity = 130/154 (84.42%), Postives = 133/154 (86.36%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. NCBI nr
Match: ACA35272.1 (unknown protein [Cucumis sativus]) HSP 1 Score: 231 bits (590), Expect = 2.00e-74 Identity = 125/157 (79.62%), Postives = 132/157 (84.08%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. NCBI nr
Match: XP_022983147.1 (protein BIC1-like [Cucurbita maxima]) HSP 1 Score: 204 bits (519), Expect = 1.32e-64 Identity = 110/152 (72.37%), Postives = 117/152 (76.97%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9LXJ1 (Protein BIC1 OS=Arabidopsis thaliana OX=3702 GN=BIC1 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.7e-25 Identity = 67/125 (53.60%), Postives = 79/125 (63.20%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9M280 (Protein BIC2 OS=Arabidopsis thaliana OX=3702 GN=BIC2 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7TR64 (Protein BIC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003850 PE=4 SV=1) HSP 1 Score: 297 bits (760), Expect = 1.33e-101 Identity = 149/156 (95.51%), Postives = 150/156 (96.15%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3B6P7 (uncharacterized protein LOC103486607 OS=Cucumis melo OX=3656 GN=LOC103486607 PE=4 SV=1) HSP 1 Score: 297 bits (760), Expect = 1.33e-101 Identity = 149/156 (95.51%), Postives = 150/156 (96.15%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0LAW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776900 PE=4 SV=1) HSP 1 Score: 275 bits (703), Expect = 6.76e-93 Identity = 142/157 (90.45%), Postives = 146/157 (92.99%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. ExPASy TrEMBL
Match: B3U2A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 PE=4 SV=1) HSP 1 Score: 231 bits (590), Expect = 9.68e-75 Identity = 125/157 (79.62%), Postives = 132/157 (84.08%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1IYG7 (protein BIC1-like OS=Cucurbita maxima OX=3661 GN=LOC111481785 PE=4 SV=1) HSP 1 Score: 204 bits (519), Expect = 6.41e-65 Identity = 110/152 (72.37%), Postives = 117/152 (76.97%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. TAIR 10
Match: AT3G52740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26 Identity = 67/125 (53.60%), Postives = 79/125 (63.20%), Query Frame = 0
BLAST of MELO3C009470.jh1.t1 vs. TAIR 10
Match: AT3G44450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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