MELO3C005376.jh1.t2 (mRNA) Melon (Harukei-3) v1.41

Overview


Name	MELO3C005376.jh1.t2
Type	mRNA
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	protein ROOT PRIMORDIUM DEFECTIVE 1
Location	chr09: 20648203 .. 20650792 (+)
Sequence length	2518
RNA-Seq Expression	MELO3C005376.jh1.t2
Synteny	MELO3C005376.jh1.t2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGAAGAGTGAGGTTTCAAATTCCATGGCTTGACCTCCACCTCCAAGGCTGCGACTCTCCATCCCCTCCCTCAACAATCTCGACGCTAAAACCCTAAACCCTAATCGAAGTGAAATCCATTGGAAAAAGATGTTGATCTTTTTTGGCTACCACCCTAAATTCCTCACCTCCAATTTTACATCATTCAAAACTAGGGCTTATTTTCTCTTCAATTTCACTCGCTCACGATCAATGTCTCAATCCACCTCCATTCCCAAAAACCTCCAAAGGGTTCGTGACCATGGCTACGATAATTACATGGAAGTGGAGAAGAAAATCCGTAAAGTGCTCAAGTTTCAGGACCTTATTCTCTCCCAATTCAACCAAACAATCCCAGTTTCTCGCCTTGATATCTTAGCTCGCCGCCTTGGGTTCAAGCAACACGAAGCTGGGGCCTTCGTCCTCAAATTCCCTCATGTATTTGAAATCTACGAGCACCCTGTTCAAAGAATCCTCTATTGCAGGTTAACCCGAAAAGCCCACCTCCAAATCGAGCAGCAAAAGCGAGCTGTCATTGCCCAGATTCCGGATGCTGTCACTCGGCTGAGGAAACTCTTGATGATGTCCAACAAGGGCCGTCTTCGCCTCGAGCATATTCGGATTGCTCGGTCTGAATTCGGGTTGCCTGACGATTTTGAATATTCGGTAGTTCTCAAACACCCTCAATTTTTTAGACTGTTTGATGCTAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAGTCTTACTGTTTGTGCAATAGAGAGAGCTAGGGAGAGGGTTTATAGAGAGCAAGGAAGTGATGCTGAGGACATTAGATTCTCGTTCATTGTGAATTTTCCTCCTGGGTTTAAGATAGGGAAGTATTTCAGAATTGCAATGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCATATGAGGACATTTCTGAGTATGATATGAGGTCCATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCTTTGACTGTAGAGAAGAAGCTTACATTGGAACGGATTGCGCATTTTCGATTAGCAATGAATCTGCCGAAGAAGTTGAAGGACTTCCTTCTTCAACATCAGGGAATTTTCTACATTTCAACAAGAGGAAACCATGGAAAACTTCACACTGTTTTCCTCAGGGAGGGTTATAGGAGAGGTGAGTTAGTAGAGCCTAACGATGTGTATTTGGCTAGAAGACATTTGGCTGAATTGGTTTTACTCAGCCCAAGGAAGGCAAAACTAGACAGGGAACTAGTTGGGTACAGGAGAGAGAGAGTGGGTTATGATATGGAAAACTGTAGGACAGATTATGTGGAGGATAAATCTGATGATTTTGGTGTTGAGAACAAAGGCAATGTGAGAGATGTTTTGGACTCAGACATAGGTTCTGATGTTGAATCCGATTTCTCTGATGATGATAATCATAGTGTCGAGGTCGAGGATGTGGACATAACGGAATAACGTAAACTGAATGAATAACGGAAACTGAATGTTCTCCAACAGTTTCCTTGGAGCTGCTGTGTTGAAGGTTCAGAGCTCATTTGGTAGATCTGGCTGATACAACGTTGTGAGTAAGCACTGGGAATTATACTTGTTGTATACTAAACATAAGCACTCTTCAAACATTTATTTTGTTTATTCAGAGCCTAACGGCATTAATCTCTTCGCGTTGGTGTTCGCTGTTCGGTTGGGGCCGTTAATCGGTTCTGTTTTGGATATGTGGTTTGGCAGTGTGTGAACGAGTGAAGGGATGCCATGGCTTAAAGAGGAGAGAGTTGAAGTTACCACAAGCATGGAATCCAAATTCTGAAGGCAAACAAGAATTGGGTAAAAAGGAAATGAATTCAACTTGGACGGCCATGATCTGCAGGAATACTACATGGAAAGTCCTTGTAGTTTTACGTTTTAGCTTCAAAGCTGCACAGAATGTGGCATAGAAAAAGAAAGCTTCTGGAAGATTTTTGTTTCAGGTTGCTTTCAATTCAGTTATCATTTTTATCTCTCTTTCTCAATAAATCAATCAGTGATTTAATAAAAAAAATTTGCGTTGTATGCATTCATTTGATGATTCTTTTTCATTAACATCAACATGGAAATTGGGGAGAGGGGTTTGTAAGTTTTACATGTGGCCGGTCATGGAAAAGTCAGCACTTTGTTTCTAATTTCAACTAAGGTTCCTTTTTGGTTGAACAACTTTGTTGTACTATCTGCAAGATGGTTGCGGAAGGCCTCGATCATTTACTTCTGCGATGTGTTTGTGTGAAATTGTTTCTTTGAGATGTTCAACTTGAGCTTGAAGAGTTGTAGAGAGACGATTGCAGAGCTTCTTCTTTGCATGCCCATTGCATGCATTTTCATGACTAAAGAGTTGTTCTTGTGGCAAGCAGGTCTTTTGAGGCCAGAGCGATGTTCAGTTCTTTTTTAGATCCTATCTTTCTTAGTAATCCCGGTTAGAACTGCTTTTTGTATATTGTTGTAAGGCTCTTTTTTGGTTCCCTTGTATATATACCTGAAAGAACAATTTGGAACAAA

mRNA sequence

TTTGAAGAGTGAGGTTTCAAATTCCATGGCTTGACCTCCACCTCCAAGGCTGCGACTCTCCATCCCCTCCCTCAACAATCTCGACGCTAAAACCCTAAACCCTAATCGAAGTGAAATCCATTGGAAAAAGATGTTGATCTTTTTTGGCTACCACCCTAAATTCCTCACCTCCAATTTTACATCATTCAAAACTAGGGCTTATTTTCTCTTCAATTTCACTCGCTCACGATCAATGTCTCAATCCACCTCCATTCCCAAAAACCTCCAAAGGGTTCGTGACCATGGCTACGATAATTACATGGAAGTGGAGAAGAAAATCCGTAAAGTGCTCAAGTTTCAGGACCTTATTCTCTCCCAATTCAACCAAACAATCCCAGTTTCTCGCCTTGATATCTTAGCTCGCCGCCTTGGGTTCAAGCAACACGAAGCTGGGGCCTTCGTCCTCAAATTCCCTCATGTATTTGAAATCTACGAGCACCCTGTTCAAAGAATCCTCTATTGCAGGTTAACCCGAAAAGCCCACCTCCAAATCGAGCAGCAAAAGCGAGCTGTCATTGCCCAGATTCCGGATGCTGTCACTCGGCTGAGGAAACTCTTGATGATGTCCAACAAGGGCCGTCTTCGCCTCGAGCATATTCGGATTGCTCGGTCTGAATTCGGGTTGCCTGACGATTTTGAATATTCGGTAGTTCTCAAACACCCTCAATTTTTTAGACTGTTTGATGCTAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAGTCTTACTGTTTGTGCAATAGAGAGAGCTAGGGAGAGGGTTTATAGAGAGCAAGGAAGTGATGCTGAGGACATTAGATTCTCGTTCATTGTGAATTTTCCTCCTGGGTTTAAGATAGGGAAGTATTTCAGAATTGCAATGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCATATGAGGACATTTCTGAGTATGATATGAGGTCCATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCTTTGACTGTAGAGAAGAAGCTTACATTGGAACGGATTGCGCATTTTCGATTAGCAATGAATCTGCCGAAGAAGTTGAAGGACTTCCTTCTTCAACATCAGGGAATTTTCTACATTTCAACAAGAGGAAACCATGGAAAACTTCACACTGTTTTCCTCAGGGAGGGTTATAGGAGAGGTGAGTTAGTAGAGCCTAACGATGTGTATTTGGCTAGAAGACATTTGGCTGAATTGGTTTTACTCAGCCCAAGGAAGGCAAAACTAGACAGGGAACTAGTTGGGTACAGGAGAGAGAGAGTGGGTTATGATATGGAAAACTGTAGGACAGATTATGTGGAGGATAAATCTGATGATTTTGGTGTTGAGAACAAAGGCAATGTGAGAGATGTTTTGGACTCAGACATAGGTTCTGATGTTGAATCCGATTTCTCTGATGATGATAATCATAGTGTCGAGGTCGAGGATGTGGACATAACGGAATAACGTAAACTGAATGAATAACGGAAACTGAATGTTCTCCAACAGTTTCCTTGGAGCTGCTGTGTTGAAGGTTCAGAGCTCATTTGGTAGATCTGGCTGATACAACGTTGTGAAGCCTAACGGCATTAATCTCTTCGCGTTGGTGTTCGCTGTTCGGTTGGGGCCGTTAATCGGTTCTGTTTTGGATATGTGGTTTGGCAGTGTGTGAACGAGTGAAGGGATGCCATGGCTTAAAGAGGAGAGAGTTGAAGTTACCACAAGCATGGAATCCAAATTCTGAAGGCAAACAAGAATTGGGTAAAAAGGAAATGAATTCAACTTGGACGGCCATGATCTGCAGGAATACTACATGGAAAGTCCTTGTAGTTTTACGTTTTAGCTTCAAAGCTGCACAGAATGTGGCATAGAAAAAGAAAGCTTCTGGAAGATTTTTGTTTCAGGTTGCTTTCAATTCAGTTATCATTTTTATCTCTCTTTCTCAATAAATCAATCAGTGATTTAATAAAAAAAATTTGCGTTGTATGCATTCATTTGATGATTCTTTTTCATTAACATCAACATGGAAATTGGGGAGAGGGGTTTGTAAGTTTTACATGTGGCCGGTCATGGAAAAGTCAGCACTTTGTTTCTAATTTCAACTAAGGTTCCTTTTTGGTTGAACAACTTTGTTGTACTATCTGCAAGATGGTTGCGGAAGGCCTCGATCATTTACTTCTGCGATGTGTTTGTGTGAAATTGTTTCTTTGAGATGTTCAACTTGAGCTTGAAGAGTTGTAGAGAGACGATTGCAGAGCTTCTTCTTTGCATGCCCATTGCATGCATTTTCATGACTAAAGAGTTGTTCTTGTGGCAAGCAGGTCTTTTGAGGCCAGAGCGATGTTCAGTTCTTTTTTAGATCCTATCTTTCTTAGTAATCCCGGTTAGAACTGCTTTTTGTATATTGTTGTAAGGCTCTTTTTTGGTTCCCTTGTATATATACCTGAAAGAACAATTTGGAACAAA

Coding sequence (CDS)

ATGTTGATCTTTTTTGGCTACCACCCTAAATTCCTCACCTCCAATTTTACATCATTCAAAACTAGGGCTTATTTTCTCTTCAATTTCACTCGCTCACGATCAATGTCTCAATCCACCTCCATTCCCAAAAACCTCCAAAGGGTTCGTGACCATGGCTACGATAATTACATGGAAGTGGAGAAGAAAATCCGTAAAGTGCTCAAGTTTCAGGACCTTATTCTCTCCCAATTCAACCAAACAATCCCAGTTTCTCGCCTTGATATCTTAGCTCGCCGCCTTGGGTTCAAGCAACACGAAGCTGGGGCCTTCGTCCTCAAATTCCCTCATGTATTTGAAATCTACGAGCACCCTGTTCAAAGAATCCTCTATTGCAGGTTAACCCGAAAAGCCCACCTCCAAATCGAGCAGCAAAAGCGAGCTGTCATTGCCCAGATTCCGGATGCTGTCACTCGGCTGAGGAAACTCTTGATGATGTCCAACAAGGGCCGTCTTCGCCTCGAGCATATTCGGATTGCTCGGTCTGAATTCGGGTTGCCTGACGATTTTGAATATTCGGTAGTTCTCAAACACCCTCAATTTTTTAGACTGTTTGATGCTAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAGTCTTACTGTTTGTGCAATAGAGAGAGCTAGGGAGAGGGTTTATAGAGAGCAAGGAAGTGATGCTGAGGACATTAGATTCTCGTTCATTGTGAATTTTCCTCCTGGGTTTAAGATAGGGAAGTATTTCAGAATTGCAATGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCATATGAGGACATTTCTGAGTATGATATGAGGTCCATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCTTTGACTGTAGAGAAGAAGCTTACATTGGAACGGATTGCGCATTTTCGATTAGCAATGAATCTGCCGAAGAAGTTGAAGGACTTCCTTCTTCAACATCAGGGAATTTTCTACATTTCAACAAGAGGAAACCATGGAAAACTTCACACTGTTTTCCTCAGGGAGGGTTATAGGAGAGGTGAGTTAGTAGAGCCTAACGATGTGTATTTGGCTAGAAGACATTTGGCTGAATTGGTTTTACTCAGCCCAAGGAAGGCAAAACTAGACAGGGAACTAGTTGGGTACAGGAGAGAGAGAGTGGGTTATGATATGGAAAACTGTAGGACAGATTATGTGGAGGATAAATCTGATGATTTTGGTGTTGAGAACAAAGGCAATGTGAGAGATGTTTTGGACTCAGACATAGGTTCTGATGTTGAATCCGATTTCTCTGATGATGATAATCATAGTGTCGAGGTCGAGGATGTGGACATAACGGAATAA

Protein sequence

MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE

Homology

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BLAST of MELO3C005376.jh1.t2 vs. NCBI nr
Match: XP_016898810.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898811.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898812.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898813.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 910 bits (2353), Expect = 0.0
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0


Query: 1   MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
           MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1   MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60

Query: 61  KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
           KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61  KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120

Query: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
           ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180

Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
           DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240

Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
           FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300

Query: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
           MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360

Query: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
           RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD
Sbjct: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420

Query: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
           FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462

[Close]

BLAST of MELO3C005376.jh1.t2 vs. NCBI nr
Match: XP_004143708.2 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KAE8647948.1 hypothetical protein Csa_000134 [Cucumis sativus])

HSP 1 Score: 874 bits (2257), Expect = 0.0
Identity = 445/462 (96.32%), Postives = 451/462 (97.62%), Query Frame = 0


Query: 1   MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
           MLIFFGYHPK LTSNFTSFKTRA+FLFN T SRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1   MLIFFGYHPKSLTSNFTSFKTRAFFLFNLTLSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60

Query: 61  KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
           KK RKVLKFQ+LILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61  KKTRKVLKFQELILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120

Query: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
           ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSN GRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180

Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
           DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYRE+GSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240

Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
           FSF+VNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300

Query: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
           MLSLTVEKK+TLERIAHFRLAM LPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360

Query: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
           R ELVEPNDVYLARR LAELVLLSPRKA +DRELVGYRRERVGYDMEN RTDYVEDKS D
Sbjct: 361 RSELVEPNDVYLARRQLAELVLLSPRKATVDRELVGYRRERVGYDMENSRTDYVEDKSVD 420

Query: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
           FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462

[Close]

BLAST of MELO3C005376.jh1.t2 vs. NCBI nr
Match: TYK00294.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 845 bits (2182), Expect = 2.97e-308
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0


Query: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94
           MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60

Query: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
           LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
           SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300

Query: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394
           HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 360

Query: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454
           VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

Query: 455 VEDVDITE 462
           VEDVDITE
Sbjct: 421 VEDVDITE 428

[Close]

BLAST of MELO3C005376.jh1.t2 vs. NCBI nr
Match: KAA0055169.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 831 bits (2146), Expect = 7.01e-302
Identity = 419/420 (99.76%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94
           MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60

Query: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
           LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
           SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300

Query: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394
           HQGIFYISTRGNHGKLHTVFLREGYRRG+LVEPNDVYLARRHLAELVLLSPRKAKLDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGDLVEPNDVYLARRHLAELVLLSPRKAKLDREL 360

Query: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454
           VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

[Close]

BLAST of MELO3C005376.jh1.t2 vs. NCBI nr
Match: XP_038876292.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038876293.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])

HSP 1 Score: 823 bits (2125), Expect = 5.84e-299
Identity = 419/465 (90.11%), Postives = 440/465 (94.62%), Query Frame = 0


Query: 2   LIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEK 61
           +IFFG+H KFLTS F +F+T AYFL NF+RSRSM+QSTSIPK LQRVRDHGYDNYMEVEK
Sbjct: 1   MIFFGHHRKFLTSKFIAFETTAYFLCNFSRSRSMTQSTSIPKKLQRVRDHGYDNYMEVEK 60

Query: 62  KIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI 121
           K RKVLKFQDLIL+Q NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI
Sbjct: 61  KTRKVLKFQDLILTQINQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI 120

Query: 122 LYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDD 181
           LYCRLTRKAHLQIEQQK+AVIAQIPDAVTRLRKLLMMSN GRLRLEHIRIARSEFGLPDD
Sbjct: 121 LYCRLTRKAHLQIEQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDD 180

Query: 182 FEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIRF 241
           FEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP+L VCAIERARERVYRE+GSDAEDIRF
Sbjct: 181 FEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLAVCAIERARERVYREKGSDAEDIRF 240

Query: 242 SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEM 301
           SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYED+S+YDMRSIEA KRMEKRAVATIHEM
Sbjct: 241 SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDVSKYDMRSIEALKRMEKRAVATIHEM 300

Query: 302 LSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRR 361
           LSLTVEKK+TLERIAHFRLAMNLP KLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRR
Sbjct: 301 LSLTVEKKITLERIAHFRLAMNLPNKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRR 360

Query: 362 GELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDDF 421
           GEL+EPNDVYLARR LAELVLLSPRKAKLD+ELVGYRRERVGYDME+ RTDYVEDK DDF
Sbjct: 361 GELIEPNDVYLARRKLAELVLLSPRKAKLDKELVGYRRERVGYDMESFRTDYVEDKFDDF 420

Query: 422 GVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE----VEDVDITE 462
            V NKGNVRDVLDSD+ SDVE +FSDDDNHSV+     EDV+ TE
Sbjct: 421 AVGNKGNVRDVLDSDLDSDVEPNFSDDDNHSVDKTFKAEDVNETE 465

[Close]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 1.2e-170
Identity = 297/373 (79.62%), Postives = 331/373 (88.74%), Query Frame = 0


Query: 28  NFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLD 87
           N    +  SQST+IPK   RVRDHGYDNYMEVEKKIRKV+KF  LILSQ N TI +S LD
Sbjct: 27  NLILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLD 86

Query: 88  ILARR--LGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQI 147
            LARR  LGFKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTRKA  QI  +  AV+ QI
Sbjct: 87  TLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI 146

Query: 148 PDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNK 207
           PDAVTRLRKL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LKHPQFFRL D +ETR+K
Sbjct: 147 PDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDK 206

Query: 208 YIEIVERDPSLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQ 267
           YIEIVE+DP+L++CAIER RE  YR +G DAED+RFSF+VNFPPGFKIGKYFRIA+WKWQ
Sbjct: 207 YIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQ 266

Query: 268 RLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLP 327
           RLPYWSPYEDIS YD+RS+EAQ R+EKR+VA IHE+LSLTVEKK+TLERIAHFR  MNLP
Sbjct: 267 RLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLP 326

Query: 328 KKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSP 387
           KKLK+FLLQHQGIFYISTRGN+GKLHTVFLREGY+RGELVEPNDVYLARR LAELVL+SP
Sbjct: 327 KKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSP 386

Query: 388 RKAKLDRELVGYR 399
           RKAK+D ELV YR
Sbjct: 387 RKAKVDAELVRYR 399

[Close]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.9e-38
Identity = 128/421 (30.40%), Postives = 217/421 (51.54%), Query Frame = 0


Query: 45  LQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGF-KQHEAGAF 104
           ++R ++  +D  ++ +KK++ VLK ++++++Q ++ + +  L    R LG  ++    A 
Sbjct: 55  VKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIAL 114

Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGR 164
           + +FP VF++ E  V  + + RLT  A      + R        AV +LRKLLMMS + R
Sbjct: 115 LRRFPGVFDVVEEGVYSLRF-RLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKR 174

Query: 165 LRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIER 224
           + +E +   + + GLP +F  +V L++PQ+FR+   +  R   +E+   DP L V A E 
Sbjct: 175 ILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRV--VRMDRGPALELTHWDPELAVSAAEL 234

Query: 225 ARERVYREQGSDA-----EDIRFSFIVNFPPGFKI--GKYFRIAMWKWQRLPYWSPYEDI 284
           A E     +  +        ++F+  V  P G K+  G+  RIA +K   +PY SPY D 
Sbjct: 235 AEEESRAREAEERNLIIDRPLKFN-RVRLPKGLKLTRGEARRIARFK--EMPYISPYADF 294

Query: 285 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQ 344
           S   +RS   +K  EK A   +HE+LSLTVEK+  ++ + HFR      + L+  +++H 
Sbjct: 295 SH--LRSGSDEK--EKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHP 354

Query: 345 GIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVG 404
            +FY+S +G+     +VFLRE Y+  +LVE N + L +  +  LV + PR  +  R  VG
Sbjct: 355 DMFYVSFKGDR---DSVFLREAYKDSQLVEKNQLVLLKEKMRALVAV-PRFPR--RAAVG 414

Query: 405 YRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVE 458
              E  G +      D V D+  D   E   ++ D++    G   ++D+   D    E +
Sbjct: 415 TGEEAEGMNGSLQSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYEWGDGWFGEND 459

[Close]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.5e-38
Identity = 136/433 (31.41%), Postives = 225/433 (51.96%), Query Frame = 0


Query: 45  LQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGF-KQHEAGAF 104
           ++R ++  +DN ++ +KK++ VLK +++++S  ++ + +  L    R LG  ++    A 
Sbjct: 61  VKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIAL 120

Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGR 164
           + +FP VFE+ E  V  + + RLT  A      +          AVT+LRKLLMMS   R
Sbjct: 121 LKRFPGVFEVVEEGVYSLRF-RLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKR 180

Query: 165 LRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE- 224
           + +E I   +++ GLP +F  ++ L++PQ+FR+   +  R   +E+   DP L V A E 
Sbjct: 181 ILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRV--VQMDRGPGLELTHWDPELAVSAAEV 240

Query: 225 -----RARERVYREQGSDAEDIRFSFIVNFPPGFKI--GKYFRIAMWKWQRLPYWSPYED 284
                RARE   R    D   ++F+  V  P G K+  G+  R+A +K   +PY SPY D
Sbjct: 241 AEEENRAREEQERNLIID-RPLKFN-RVKLPQGLKLSRGEARRVAQFK--EMPYISPYSD 300

Query: 285 ISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQH 344
            S   +RS  A+K  EK A   +HE+LSLT+EK+  ++ + HFR      + L+  L++H
Sbjct: 301 FSH--LRSGSAEK--EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 360

Query: 345 QGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLS--PRKA----- 404
             +FY+S +G+     +VFLRE Y+  +LVE + + L +  +  LV +   PR+      
Sbjct: 361 PDMFYVSLKGDR---DSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATS 420

Query: 405 -KLDRELVGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDV----LDSDIGSDVES 455
            + DR     +    G D+E+   + + D  +D   E  G   D      D  +G + +S
Sbjct: 421 EEADRTNGAAQMLSEGSDVEDDEDEGLSD-MEDLISEISGGKSDTDYHWGDGWVGENDDS 478

[Close]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.7e-34
Identity = 119/417 (28.54%), Postives = 215/417 (51.56%), Query Frame = 0


Query: 45  LQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAG-AF 104
           ++R ++  +D+ ++ +KK++ VL  + +++SQ ++ + +  L    R LG K+     A 
Sbjct: 76  VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135

Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDA-VTRLRKLLMMSNKG 164
           + K+P VFEI E     + +   +    L +++ +  +  ++ D  V +LRKL+MMS   
Sbjct: 136 LRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMR--IRNELEDVLVVKLRKLVMMSIDK 195

Query: 165 RLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE 224
           R+ LE I   +++ GLP +F  ++  ++PQ+FR+      R   +E+   DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV--VPTPRGPALELTHWDPELAVSAAE 255

Query: 225 ------RARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDI 284
                 R RE   R    D    +F+  V  P G  + K     + +++ + Y SPY+D 
Sbjct: 256 LSEDDNRTRESEERNLIIDRPP-KFN-RVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 315

Query: 285 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQ 344
           S     ++E     EK A   IHE+LSLT EK+  ++ + HFR      ++L+  L++H 
Sbjct: 316 SHLRSGTLE----KEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 375

Query: 345 GIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLS--PRKAKLDREL 404
            +FY+S +G      +VFLRE YR  EL++ + + L +  +  LV +   PR+       
Sbjct: 376 DLFYVSLKGER---DSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRG------ 435

Query: 405 VGYRRERVGYDMENCRTDY-VEDKSDDFGVENKGNVRDVLD-SDIGSDVESDFSDDD 450
            G R++  G ++E   +D   E++ ++   E   +V   L+  D G+D + D++DD+
Sbjct: 436 -GPRKDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDE 472

[Close]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-22
Identity = 110/394 (27.92%), Postives = 179/394 (45.43%), Query Frame = 0


Query: 20  KTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEV--EKKIRKVLKFQDLILSQF 79
           KT A    N T+ R     T +   ++  RD  +DN   +    +++ V+  ++ I+ + 
Sbjct: 9   KTVASSCTNLTQKR-----TYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEP 68

Query: 80  NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQ 139
           N+ IP+S +    R+      +   F+ KFP +FE +  P   + + RLT +A  ++++Q
Sbjct: 69  NRCIPISAISKKTRQFDVST-KIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEA-TELDRQ 128

Query: 140 KRAVI-AQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRL 199
           +R V      D   RL+KL++MS    L L  ++  +   GLPDD+     +     FR 
Sbjct: 129 ERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRF 188

Query: 200 FDAKE-TRNKYIEIVERDPSLTVC---AIERARERVYREQGSDAEDIRFSFIVNFPPGFK 259
            D ++  +   ++    D  L+V    A+++ R  V  E+            + FP    
Sbjct: 189 VDMEDGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEE------------IEFPLFPS 248

Query: 260 IGKYFRIAMWKW----QRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEK 319
            G   R+ +  W    Q+LPY SPY+D S  D  S  A    EKR V  +HE+L L VE 
Sbjct: 249 KGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIA----EKRVVGFLHELLCLFVEH 308

Query: 320 KLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPN 379
               +++   +    LP+K+     +H  IFY+S +    K  T  LRE YR    VE +
Sbjct: 309 SAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMK---NKTCTAILREPYRDKASVETH 368

Query: 380 DVYLARRHLAELVLLSPRKAKLDRELVGYRRERV 403
            V   R+   +L+  S    K  R   G+R E V
Sbjct: 369 PVLGVRKKYIQLMKNSELILKSRRNSFGFRDEGV 376

[Close]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy TrEMBL
Match: A0A1S4DS47 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103504628 PE=4 SV=1)

HSP 1 Score: 910 bits (2353), Expect = 0.0
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0


Query: 1   MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
           MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1   MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60

Query: 61  KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
           KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61  KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120

Query: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
           ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180

Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
           DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240

Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
           FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300

Query: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
           MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360

Query: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
           RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD
Sbjct: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420

Query: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
           FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462

[Close]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5D3BLZ6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00370 PE=4 SV=1)

HSP 1 Score: 845 bits (2182), Expect = 1.44e-308
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0


Query: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94
           MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60

Query: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
           LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
           SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300

Query: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394
           HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 360

Query: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454
           VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

Query: 455 VEDVDITE 462
           VEDVDITE
Sbjct: 421 VEDVDITE 428

[Close]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5A7UNY2 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G001020 PE=4 SV=1)

HSP 1 Score: 831 bits (2146), Expect = 3.39e-302
Identity = 419/420 (99.76%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94
           MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60

Query: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
           LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
           SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300

Query: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394
           HQGIFYISTRGNHGKLHTVFLREGYRRG+LVEPNDVYLARRHLAELVLLSPRKAKLDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGDLVEPNDVYLARRHLAELVLLSPRKAKLDREL 360

Query: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454
           VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

[Close]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy TrEMBL
Match: A0A0A0KLD1 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G173460 PE=4 SV=1)

HSP 1 Score: 817 bits (2111), Expect = 9.49e-298
Identity = 415/428 (96.96%), Postives = 420/428 (98.13%), Query Frame = 0


Query: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94
           MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQ+LILSQFNQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60

Query: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
           LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
           SLTVCAIERARERVYRE+GSDAEDIRFSF+VNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAM LPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300

Query: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394
           HQGIFYISTRGNHGKLHTVFLREGYRR ELVEPNDVYLARR LAELVLLSPRKA +DREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360

Query: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454
           VGYRRERVGYDMEN RTDYVEDKS DFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

Query: 455 VEDVDITE 462
           VEDVDITE
Sbjct: 421 VEDVDITE 428

[Close]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy TrEMBL
Match: A0A6J1EMT6 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC111435790 PE=4 SV=1)

HSP 1 Score: 788 bits (2034), Expect = 1.84e-285
Identity = 401/465 (86.24%), Postives = 433/465 (93.12%), Query Frame = 0


Query: 1   MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
           M+IF+GY  KF ++ FT+FKT AY L NF+RSRSMSQSTSIP+ L+RVRDHGYDNYM+VE
Sbjct: 1   MMIFYGYCSKFRSTKFTAFKTTAYVLCNFSRSRSMSQSTSIPRKLERVRDHGYDNYMDVE 60

Query: 61  KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
           KK RKVLKFQDLIL+Q NQTIPVSRLD+ ARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61  KKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120

Query: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
           ILYCRLTRKAHLQIEQ+K+AVIAQIPDAVTRLRKLLMMSN GRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180

Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
           DFEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP+LTVCAIE+ARERVYRE+GSDAEDIR
Sbjct: 181 DFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLTVCAIEKARERVYREKGSDAEDIR 240

Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
           FSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHE 300

Query: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
           ML LTVEKK++LERIAHFRLAM+LPKKLKDFLLQHQGIFYISTRGNHGKLHT+FLRE YR
Sbjct: 301 MLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQHQGIFYISTRGNHGKLHTIFLREAYR 360

Query: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
           RGEL+EPNDVYLARR LAELVLLSPRKAKL+RELVGYRRERVGYDME+ R D    K DD
Sbjct: 361 RGELIEPNDVYLARRTLAELVLLSPRKAKLNRELVGYRRERVGYDMESFRPD----KLDD 420

Query: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSV----EVEDVDIT 461
           +G  ++GNVRDVLDSD+GSD ESDFSDD N SV    E EDV+IT
Sbjct: 421 YGAGDRGNVRDVLDSDVGSDSESDFSDDSNRSVDETFEEEDVNIT 461

[Close]

BLAST of MELO3C005376.jh1.t2 vs. TAIR 10
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 600.9 bits (1548), Expect = 8.7e-172
Identity = 297/373 (79.62%), Postives = 331/373 (88.74%), Query Frame = 0


Query: 28  NFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLD 87
           N    +  SQST+IPK   RVRDHGYDNYMEVEKKIRKV+KF  LILSQ N TI +S LD
Sbjct: 27  NLILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLD 86

Query: 88  ILARR--LGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQI 147
            LARR  LGFKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTRKA  QI  +  AV+ QI
Sbjct: 87  TLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI 146

Query: 148 PDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNK 207
           PDAVTRLRKL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LKHPQFFRL D +ETR+K
Sbjct: 147 PDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDK 206

Query: 208 YIEIVERDPSLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQ 267
           YIEIVE+DP+L++CAIER RE  YR +G DAED+RFSF+VNFPPGFKIGKYFRIA+WKWQ
Sbjct: 207 YIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQ 266

Query: 268 RLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLP 327
           RLPYWSPYEDIS YD+RS+EAQ R+EKR+VA IHE+LSLTVEKK+TLERIAHFR  MNLP
Sbjct: 267 RLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLP 326

Query: 328 KKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSP 387
           KKLK+FLLQHQGIFYISTRGN+GKLHTVFLREGY+RGELVEPNDVYLARR LAELVL+SP
Sbjct: 327 KKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSP 386

Query: 388 RKAKLDRELVGYR 399
           RKAK+D ELV YR
Sbjct: 387 RKAKVDAELVRYR 399

[Close]

BLAST of MELO3C005376.jh1.t2 vs. TAIR 10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 234.2 bits (596), Expect = 2.1e-61
Identity = 147/384 (38.28%), Postives = 225/384 (58.59%), Query Frame = 0


Query: 26  LFNFTRSRSMSQSTSIPKNLQ-RVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVS 85
           L+ + + R +    S    L+ R RDH  D  +   +K+  +L+   L+ S+  +  P  
Sbjct: 46  LYFYNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQIRKLNIILEISKLMSSK--KRGPFV 105

Query: 86  RLDILAR--RLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVI 145
            L +++R   L       GAF+ K+PH FEI+ HP  + L C++T K  + I++++  V 
Sbjct: 106 SLQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVR 165

Query: 146 AQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKET 205
               DAV R++KLL++S  G LR+  +R+ R E GLP+DF  S++ K+   FRL D +  
Sbjct: 166 ECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET- 225

Query: 206 RNKYIEIVER-DPSLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAM 265
               +E+V+R D SL V  +E  RE  YRE+     +  ++F ++ P GFKI K FR  +
Sbjct: 226 ----LELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREEL 285

Query: 266 WKWQRLPYWSPYE--DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFR 325
             WQR+PY  PY+  +IS    R +E   R EKR VA IHE+LSLTVEK + +ER+AHFR
Sbjct: 286 KNWQRVPYVKPYDRKEIS----RGLE---RFEKRVVAVIHELLSLTVEKMVEVERLAHFR 345

Query: 326 LAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAE 385
             + +   +++ +L+H GIFY+ST+G+     T+FLRE Y +G L+EPN +Y  RR + +
Sbjct: 346 KDLGIEVNVREVILKHPGIFYVSTKGSS---QTLFLREAYSKGCLIEPNPIYNVRRKMLD 405

Query: 386 LVLLSPRKAK--LDRELVGYRRER 402
           LVLL  R ++  L RE   +R E+
Sbjct: 406 LVLLKTRYSRMLLQREDETHREEK 412

[Close]

BLAST of MELO3C005376.jh1.t2 vs. TAIR 10
Match: AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 226.5 bits (576), Expect = 4.4e-59
Identity = 130/306 (42.48%), Postives = 192/306 (62.75%), Query Frame = 0


Query: 101 GAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSN 160
           GAF+ K+PH FEI+ HP  + L C++T K  + I++++  V     DAV R++KLL++S 
Sbjct: 37  GAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSK 96

Query: 161 KGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER-DPSLTVC 220
            G LR+  +R+ R E GLP+DF  S++ K+   FRL D +      +E+V+R D SL V 
Sbjct: 97  HGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET-----LELVDRDDESLCVA 156

Query: 221 AIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE--DIS 280
            +E  RE  YRE+     +  ++F ++ P GFKI K FR  +  WQR+PY  PY+  +IS
Sbjct: 157 KVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPYDRKEIS 216

Query: 281 EYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQG 340
               R +E   R EKR VA IHE+LSLTVEK + +ER+AHFR  + +   +++ +L+H G
Sbjct: 217 ----RGLE---RFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPG 276

Query: 341 IFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAK--LDRELV 400
           IFY+ST+G+     T+FLRE Y +G L+EPN +Y  RR + +LVLL  R ++  L RE  
Sbjct: 277 IFYVSTKGSS---QTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRMLLQREDE 327

Query: 401 GYRRER 402
            +R E+
Sbjct: 337 THREEK 327

[Close]

BLAST of MELO3C005376.jh1.t2 vs. TAIR 10
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 223.4 bits (568), Expect = 3.8e-58
Identity = 140/360 (38.89%), Postives = 200/360 (55.56%), Query Frame = 0


Query: 36  SQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGF 95
           S +TS      R RD  ++  M+  K + KV+  QDL L+      P   ++ L+ RL  
Sbjct: 23  STTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLS-RLSQ 82

Query: 96  KQH---EAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRL 155
           K H    A +F+ K+PH+F +   PV+   +CRLT  A     Q+  A+ A +   V RL
Sbjct: 83  KLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRL 142

Query: 156 RKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER 215
            +LL MS    + L  +     E GLPDDFE SV+ K+P  F+L D  E+    +E+V+ 
Sbjct: 143 VRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQE 202

Query: 216 DPSLT--VCAIERAR--ERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLP 275
           +        A+E+ R  E    +   D  +I+FSF  ++PPG ++ K F+  + +WQRLP
Sbjct: 203 EEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLP 262

Query: 276 YWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKL 335
           Y  PYED+     +S      +EKRAVA  HE L+LTVEK + +E+I+HFR    +   +
Sbjct: 263 YVGPYEDMVG-KKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 322

Query: 336 KDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKA 389
           +D  L H G+FY+ST+   GK HTVFLRE Y RG L++PN VY ARR L +LVLL    A
Sbjct: 323 RDLFLDHPGMFYVSTK---GKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAA 377

[Close]

BLAST of MELO3C005376.jh1.t2 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 147.5 bits (371), Expect = 2.6e-35
Identity = 119/417 (28.54%), Postives = 215/417 (51.56%), Query Frame = 0


Query: 45  LQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAG-AF 104
           ++R ++  +D+ ++ +KK++ VL  + +++SQ ++ + +  L    R LG K+     A 
Sbjct: 76  VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135

Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDA-VTRLRKLLMMSNKG 164
           + K+P VFEI E     + +   +    L +++ +  +  ++ D  V +LRKL+MMS   
Sbjct: 136 LRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMR--IRNELEDVLVVKLRKLVMMSIDK 195

Query: 165 RLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE 224
           R+ LE I   +++ GLP +F  ++  ++PQ+FR+      R   +E+   DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV--VPTPRGPALELTHWDPELAVSAAE 255

Query: 225 ------RARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDI 284
                 R RE   R    D    +F+  V  P G  + K     + +++ + Y SPY+D 
Sbjct: 256 LSEDDNRTRESEERNLIIDRPP-KFN-RVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 315

Query: 285 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQ 344
           S     ++E     EK A   IHE+LSLT EK+  ++ + HFR      ++L+  L++H 
Sbjct: 316 SHLRSGTLE----KEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 375

Query: 345 GIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLS--PRKAKLDREL 404
            +FY+S +G      +VFLRE YR  EL++ + + L +  +  LV +   PR+       
Sbjct: 376 DLFYVSLKGER---DSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRG------ 435

Query: 405 VGYRRERVGYDMENCRTDY-VEDKSDDFGVENKGNVRDVLD-SDIGSDVESDFSDDD 450
            G R++  G ++E   +D   E++ ++   E   +V   L+  D G+D + D++DD+
Sbjct: 436 -GPRKDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDE 472

The following BLAST results are available for this feature:

BLAST of MELO3C005376.jh1.t2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898810.1	0.0	100.00	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898811.1 PR...	[more]
XP_004143708.2	0.0	96.32	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KAE8647948.1 hypothetical...	[more]
TYK00294.1	2.97e-308	100.00	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa]	[more]
KAA0055169.1	7.01e-302	99.76	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa]	[more]
XP_038876292.1	5.84e-299	90.11	protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038876293.1 protein ...	[more]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q689D6	1.2e-170	79.62	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
B6TTV8	1.9e-38	30.40	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q65XL5	5.5e-38	31.41	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
A0MFS5	3.7e-34	28.54	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q9ZUZ6	1.1e-22	27.92	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of MELO3C005376.jh1.t2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DS47	0.0	100.00	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103504628 PE=4...	[more]
A0A5D3BLZ6	1.44e-308	100.00	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7UNY2	3.39e-302	99.76	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0KLD1	9.49e-298	96.96	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G173460 PE=4 S...	[more]
A0A6J1EMT6	1.84e-285	86.24	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC11143579...	[more]

BLAST of MELO3C005376.jh1.t2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33495.1	8.7e-172	79.62	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G45790.2	2.1e-61	38.28	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G45790.1	4.4e-59	42.48	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT1G06440.1	3.8e-58	38.89	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G01037.1	2.6e-35	28.54	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 48..384 e-value: 7.0E-111 score: 370.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 438..462
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 433..462
IPR040295	Protein root primordium defective 1-like	PANTHER	PTHR31476:SF9	PROTEIN ROOT PRIMORDIUM DEFECTIVE 1	coord: 20..442
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 20..442

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C005376.jh1	MELO3C005376.jh1	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C005376.jh1.t2.exon	MELO3C005376.jh1.t2.exon	exon
MELO3C005376.jh1.t2.exon	MELO3C005376.jh1.t2.exon_2	exon

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C005376.jh1.t2.start_codon	MELO3C005376.jh1.t2.start_codon	start_codon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C005376.jh1.t2.cds	MELO3C005376.jh1.t2.cds	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C005376.jh1.t2.stop_codon	MELO3C005376.jh1.t2.stop_codon	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C005376.jh1.t2	MELO3C005376.jh1.t2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding