MELO3C003615.jh1.t2 (mRNA) Melon (Harukei-3) v1.41

Overview
NameMELO3C003615.jh1.t2
TypemRNA
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptioncalcium homeostasis endoplasmic reticulum protein-like
Locationchr04: 2591543 .. 2594871 (+)
Sequence length2442
RNA-Seq ExpressionMELO3C003615.jh1.t2
SyntenyMELO3C003615.jh1.t2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTAAAATCGACTCTATGGACTCGGTTTCTTGCTCTATCATGTTTAACTCTCATATCCGGGTTGGGGATCGGACGAATGAGTTTATGGGAGGGCATGAAGACCGGAGATTGCAGCGGCGACCGACGATCAACCTCGTCGGAGCCGTCAAGGAATTGCATAAACAAAGAGAGAGAGAAAAGGAAGGGAGGACCAAGAAAGCGTGTGAAGCAGCTCGGAGGCTGGTTTGAAAGACAAAGATGGTCAGTGTAGATTTGTTCTGGCACTTGAAACATATATTTTTTTCTCTTCACTGGTTTTCACGAATTTTCGTTTTGTAGCTGAGATTCCGATGTTGAAAAGTCGAAGATACAAAGAAATTATAGGTTCTTTGTTCACGATGTCCAAATTACTGCAAGCTAGCGATTTATATATGTTTGCTCGTTTTCGAGGATTTTACTGTTGAACTTTCAGGATTGAGTAAAATGTAGTTGTTGATACTTTTGAAATTCGACGTGTTTGATTATCTGAAATGTGGTCGTGACAATTATAGCTTTTGATTATTTTTTGAGGATGGATTAAGTGAAATTTAGTTGATTGACATTTACATTCAAATTGGATTTGCTTGATGATACGAAATGGGTTTGGGGTGATTAATGATTTGTTTGTTTGCCAAATTTGTTTATGTAGATTGAAGATTTTGTCGAGATTGAGATTGTTATCCAGCTGATTACTTATACAGAATTCTCGATATCTAATGGATGGACAGTCTCAAGACTATGCAGCTGCTTCTACTACGGCTGCTTATGCACAACAGCGACGACAAACAACTAATATGCAACAACAGCTGCCGTTTGTAATCTTCATGGCCAACATCAACAATATCCTCCATCTGTTCCAGGTCTCTCTTTCCTACCGCCAATCCTGTTATGCAACAGTTCCCTTATCACCACCCTATGCAGCAGCAACCACAACTTCATCCATATCATCCACCCCACCCCACCCTCACCTTCTTCATCTTCAACAGCAGCAGCAGCCACCACCAGCTTTTGCTCCTCATTTACCCCCTCCCATGGGTCCTTCACCTTTCCACGGTCCCTATGATTCTGCTCCTCCACCACCAGTCCCACCTCCTTCAGACCTCAAGCTCCAAAAACGGATAGACAAACTCGTGGAGTATATCATAAAGAATGGCCCTGAATTTGAATCCATGATACGAGAAAAACAACAGGACAATCCAACATATGGCTTTCTCTTTGGTGGGGAGGGGAAAGGTTACTATCGTTATAAGCTTTGGCTAATGACTCGCCCCCATCTTGGAGAACCCTTCAATTCTCCCTTTCCATCTTCATCCGTGGCCATGTTGCACCCTCGTCCAAATCCTGTTACAAGTCCACCCCCCCAATGCTTCTCCGTTGAATGCTTCTGCATCAATAATTGGGGGAGCTCAAATGCATGAAACTCCTTTTGCTTCTTTCTATGAGCAGCAGCAGCACCGTCAACAGGCTTTCAGTATCCCTGGTCGGTCAGATTATGATCAATCTTCAAAATCTTTTAAAGGGCTTTCTGGACCTCTTCCTTCTTATGTTGCTTTGGAGCTCAACAATGTGCCCAGCAACCTTACTGGGACAAAAGAATCCATTGAACGTGCTAAAACTTGGTTCATGCAGTGGTCTCCTCTTGCACCAACCTTACTGGGACAAATGCTTTGGCACTTAGAGACATGATTTTTAACATAGATGATTCTGTGAAGCAACTTCTTATATATACCTTGTCAATGACATTCTTTTTGAGAGGTGCGCAACCATATGATTGCTTCTGTTATTGTTATTTGAATATTATAATTTCTTGGTTTGGTGCATTCAGCTTGCTTAAGTTCTTAATGTTGCTGAATACTGCTTAAAGTTTTATTTTCTGGAACAAATAATTTAACTGCTCTTGAAGTGAGGGATGTTCTCTCCTTCTGGCTTCTTAAATAGAATTAGATCTGATGACGAGTTTTTTTTAGAAGCTCTATTCAATAAATTATCATTTGCATTAACCAACTAATCTGATAGCAGTCCAACAATATAATAATTCGAGGTGTATTAGTTTTTTCTCATTAATTTTTCTTCCAAAATTTTCAGCATGATGCAAAGAATCAATTCAAAGGACCTTGACAATGAAGCTCTAGCATTCAAACCAGTTTTAGGTTCCATGCTTGCAAGAGTATATCACAACCCTCAAATGAAGGAGGAAAGGCAATTGAAATTACAGAAGTTGATACAGTTCTAGGCGTCTAAGGAGATTTATGATAAGGATACTGTTAACGCACTTGAAGGTGAAATGATTAGTGAGATTCCTACTAAAGCTTTGCCAGGGCATCCAAAAGAGCTATCTGCTACAGTAGATTCAGCTGCTGGTAGGTTTTTGGCTTTCTTTTTTGTATGGCTTCACTTATGTTCTCATTTGCAGAGTGCTTTTGTGAGAAAATGATATTTTCAAGTCAAATGGGTAAAATCTTTGTTAAACTTTTTCTTGGTGCCATGCAGGATTGGCACAGCATACAAACAACCACGCCATGAACCTGTGGCAACCTGATAGGCAATGCACCATTCCAAGTTTTCCTGATCAAGAGCACCCAGATAAGGCCGTTTCCTCAGGCCAGGCGCTGCCAAGATCTGTGACGCCACAAAAATTTCTACCAAGTACAATACCCACAGCTGATTTTGTAAGCTCCATTCCTTTGTCCTATTCAACCACCAAACCAACAACCCAATGCCCAATTAATGCCTGCTGCTGTGGGTGAAAAATTGCGACCATATCTTTTGTTCCCTCCTGGTCTTATTCCTCGAATGGTGAGAAAAATGCAGATTGGAAGTGGAGTCCCATATTCTTCCATGAACCCTTTGGATATTCCAACTTTAATTCCTCCATCCAATATATCTCCCTTTGAAGTTCTTGAGAGAGTGTCTAAGTGGTTTAAAGAGATTGGTGAGGTTAATCCCTCAGAAGGACCCATGAGTTTTGATGGCAAAGACAATGTATATACTTCTTATAGAAAACAAAGAAGTACCAATTTTCACTCCTCTACGAGCGCAAGGCCCACAACAAAGTGAAAAGAAACAGTTCAATTCATTACTAGGAGTGACCTCATAGCTTGGAACATGTAACATACCAACCTTTATCTGTTTTCTTCTAAGTTTTGCTGGATTTGTCCATCATTATTAGGTCATTAGCATCGGACTCAACCAGTTTAACTGTGCATTTAGTTTTGATCTAAAGAATCATTCTCGAAAAGACATAAGTTACAAATTGAGACTCAGTTTTCTTTTTGGATTTGGACATCTCGAGTAAATTGAACAGTGAGTTT

mRNA sequence

GCTAAAATCGACTCTATGGACTCGGTTTCTTGCTCTATCATGTTTAACTCTCATATCCGGGTTGGGGATCGGACGAATGAGTTTATGGGAGGGCATGAAGACCGGAGATTGCAGCGGCGACCGACGATCAACCTCGTCGGAGCCGTCAAGGAATTGCATAAACAAAGAGAGAGAGAAAAGGAAGGGAGGACCAAGAAAGCGTGTGAAGCAGCTCGGAGGCTGGTTTGAAAGACAAAGATGATTGAAGATTTTGTCGAGATTGAGATTGTTATCCAGCTGATTACTTATACAGAATTCTCGATATCTAATGGATGGACAGTCTCAAGACTATGCAGCTGCTTCTACTACGGCTGCTTATGCACAACAGCGACGACAAACAACTAATATGCAACAACAGCTGCCGTTTGTAATCTTCATGGCCAACATCAACAATATCCTCCATCTGTTCCAGGTCTCTCTTTCCTACCGCCAATCCTGTTATGCAACAGTTCCCTTATCACCACCCTATGCAGCAGCAACCACAACTTCATCCATATCATCCACCCCACCCCACCCTCACCTTCTTCATCTTCAACAGCAGCAGCAGCCACCACCAGCTTTTGCTCCTCATTTACCCCCTCCCATGGGTCCTTCACCTTTCCACGGTCCCTATGATTCTGCTCCTCCACCACCAGTCCCACCTCCTTCAGACCTCAAGCTCCAAAAACGGATAGACAAACTCGTGGAGTATATCATAAAGAATGGCCCTGAATTTGAATCCATGATACGAGAAAAACAACAGGACAATCCAACATATGGCTTTCTCTTTGGTGGGGAGGGGAAAGGTTACTATCGTTATAAGCTTTGGCTAATGACTCGCCCCCATCTTGGAGAACCCTTCAATTCTCCCTTTCCATCTTCATCCGTGGCCATGTTGCACCCTCGTCCAAATCCTGTTACAAGTCCACCCCCCCAATGCTTCTCCGTTGAATGCTTCTGCATCAATAATTGGGGGAGCTCAAATGCATGAAACTCCTTTTGCTTCTTTCTATGAGCAGCAGCAGCACCGTCAACAGGCTTTCAGTATCCCTGGTCGGTCAGATTATGATCAATCTTCAAAATCTTTTAAAGGGCTTTCTGGACCTCTTCCTTCTTATGTTGCTTTGGAGCTCAACAATGTGCCCAGCAACCTTACTGGGACAAAAGAATCCATTGAACGTGCTAAAACTTGGTTCATGCAGTGGTCTCCTCTTGCACCAACCTTACTGGGACAAATGCTTTGGCACTTAGAGACATGATTTTTAACATAGATGATTCTGTGAAGCAACTTCTTATATATACCTTGTCAATGACATTCTTTTTGAGAGCATGATGCAAAGAATCAATTCAAAGGACCTTGACAATGAAGCTCTAGCATTCAAACCAGTTTTAGGTTCCATGCTTGCAAGAGTATATCACAACCCTCAAATGAAGGAGGAAAGGCAATTGAAATTACAGAAGTTGATACAGTTCTAGGCGTCTAAGGAGATTTATGATAAGGATACTGTTAACGCACTTGAAGGTGAAATGATTAGTGAGATTCCTACTAAAGCTTTGCCAGGGCATCCAAAAGAGCTATCTGCTACAGTAGATTCAGCTGCTGGATTGGCACAGCATACAAACAACCACGCCATGAACCTGTGGCAACCTGATAGGCAATGCACCATTCCAAGTTTTCCTGATCAAGAGCACCCAGATAAGGCCGTTTCCTCAGGCCAGGCGCTGCCAAGATCTGTGACGCCACAAAAATTTCTACCAAGTACAATACCCACAGCTGATTTTGTAAGCTCCATTCCTTTGTCCTATTCAACCACCAAACCAACAACCCAATGCCCAATTAATGCCTGCTGCTGTGGGTGAAAAATTGCGACCATATCTTTTGTTCCCTCCTGGTCTTATTCCTCGAATGGTGAGAAAAATGCAGATTGGAAGTGGAGTCCCATATTCTTCCATGAACCCTTTGGATATTCCAACTTTAATTCCTCCATCCAATATATCTCCCTTTGAAGTTCTTGAGAGAGTGTCTAAGTGGTTTAAAGAGATTGGTGAGGTTAATCCCTCAGAAGGACCCATGAGTTTTGATGGCAAAGACAATGTATATACTTCTTATAGAAAACAAAGAAGTACCAATTTTCACTCCTCTACGAGCGCAAGGCCCACAACAAAGTGAAAAGAAACAGTTCAATTCATTACTAGGAGTGACCTCATAGCTTGGAACATGTAACATACCAACCTTTATCTGTTTTCTTCTAAGTTTTGCTGGATTTGTCCATCATTATTAGGTCATTAGCATCGGACTCAACCAGTTTAACTGTGCATTTAGTTTTGATCTAAAGAATCATTCTCGAAAAGACATAAGTTACAAATTGAGACTCAGTTTTCTTTTTGGATTTGGACATCTCGAGTAAATTGAACAGTGAGTTT

Coding sequence (CDS)

ATGGATGGACAGTCTCAAGACTATGCAGCTGCTTCTACTACGGCTGCTTATGCACAACAGCGACGACAAACAACTAATATGCAACAACAGCTGCCGTTTGTAATCTTCATGGCCAACATCAACAATATCCTCCATCTGTTCCAGGTCTCTCTTTCCTACCGCCAATCCTGTTATGCAACAGTTCCCTTATCACCACCCTATGCAGCAGCAACCACAACTTCATCCATATCATCCACCCCACCCCACCCTCACCTTCTTCATCTTCAACAGCAGCAGCAGCCACCACCAGCTTTTGCTCCTCATTTACCCCCTCCCATGGGTCCTTCACCTTTCCACGGTCCCTATGATTCTGCTCCTCCACCACCAGTCCCACCTCCTTCAGACCTCAAGCTCCAAAAACGGATAGACAAACTCGTGGAGTATATCATAAAGAATGGCCCTGAATTTGAATCCATGATACGAGAAAAACAACAGGACAATCCAACATATGGCTTTCTCTTTGGTGGGGAGGGGAAAGGTTACTATCGTTATAAGCTTTGGCTAATGACTCGCCCCCATCTTGGAGAACCCTTCAATTCTCCCTTTCCATCTTCATCCGTGGCCATGTTGCACCCTCGTCCAAATCCTGTTACAAGTCCACCCCCCCAATGCTTCTCCGTTGAATGCTTCTGCATCAATAATTGGGGGAGCTCAAATGCATGA

Protein sequence

MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYATVPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPPPQCFSVECFCINNWGSSNA
Homology
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BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match: KAA0038745.1 (calcium homeostasis endoplasmic reticulum protein [Cucumis melo var. makuwa])

HSP 1 Score: 432 bits (1112), Expect = 4.78e-151
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60
           MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT
Sbjct: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60

Query: 61  VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP 120
           VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP
Sbjct: 61  VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP 120

Query: 121 PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW 180
           PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW
Sbjct: 121 PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW 180

Query: 181 LMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPP 214
           LMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPP
Sbjct: 181 LMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPP 214

[Close]
BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match: TYK31358.1 (calcium homeostasis endoplasmic reticulum protein [Cucumis melo var. makuwa])

HSP 1 Score: 403 bits (1036), Expect = 1.25e-139
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60
           MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT
Sbjct: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60

Query: 61  VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP 120
           VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP
Sbjct: 61  VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP 120

Query: 121 PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW 180
           PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW
Sbjct: 121 PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW 180

Query: 181 LMTRPHLGEPFNSPFPSSSVAMLH 204
           LMTRPHLGEPFNSPFPSSS + L+
Sbjct: 181 LMTRPHLGEPFNSPFPSSSASPLN 204

[Close]
BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match: XP_004148173.1 (calcium homeostasis endoplasmic reticulum protein [Cucumis sativus] >KGN50691.1 hypothetical protein Csa_005819 [Cucumis sativus])

HSP 1 Score: 291 bits (746), Expect = 6.52e-91
Identity = 158/225 (70.22%), Postives = 165/225 (73.33%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60
           MD QSQDYAAAS  AAYAQQ+RQ TNMQQQ PF       +     F  S+         
Sbjct: 1   MDRQSQDYAAASAMAAYAQQQRQATNMQQQQPF-----GFHGQHQQFPPSVPGP------ 60

Query: 61  VPLSPPYAAATT----------TSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSP 120
            P  PP+ A                    PPHPHLLH QQQQQPPPAFAPHLPPPMGPSP
Sbjct: 61  -PFLPPHPAMQQFPYHHPMQQQPQLHPHHPPHPHLLHFQQQQQPPPAFAPHLPPPMGPSP 120

Query: 121 FHGPYDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGE 180
           FHGPYDSAPPP VPPPSD +LQKRIDKLVEYIIKNGPEFESMIREKQQDNP YGFLFGGE
Sbjct: 121 FHGPYDSAPPPQVPPPSDPELQKRIDKLVEYIIKNGPEFESMIREKQQDNPAYGFLFGGE 180

Query: 181 GKGYYRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPPP 215
           G+ YYRYKLWLMTRPHLG PFNSPFPSSSVAMLHP PNP+TSP P
Sbjct: 181 GQSYYRYKLWLMTRPHLGGPFNSPFPSSSVAMLHPHPNPMTSPSP 213

[Close]
BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match: KAA0035891.1 (calcium homeostasis endoplasmic reticulum protein-like [Cucumis melo var. makuwa] >TYK19046.1 calcium homeostasis endoplasmic reticulum protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 288 bits (738), Expect = 1.01e-89
Identity = 157/225 (69.78%), Postives = 164/225 (72.89%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60
           MD QSQDYAAAS  AAYAQQ+RQ TNMQQQ PF       +     F  S+         
Sbjct: 1   MDRQSQDYAAASAMAAYAQQQRQATNMQQQQPF-----GFHGQHQQFPPSVPGP------ 60

Query: 61  VPLSPPYAAATT----------TSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSP 120
            P  PP+ A                    PPHPHLLH QQQQQPPPAFAPHLPPPMGPSP
Sbjct: 61  -PFLPPHPAMQQFPYHHPMQQQPQLHPHHPPHPHLLHFQQQQQPPPAFAPHLPPPMGPSP 120

Query: 121 FHGPYDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGE 180
           FHGPYDSAPPP V PPSD +LQKRIDKLVEYIIKNGPEFESMIREKQQDNP YGFLFGGE
Sbjct: 121 FHGPYDSAPPPQVSPPSDPELQKRIDKLVEYIIKNGPEFESMIREKQQDNPAYGFLFGGE 180

Query: 181 GKGYYRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPPP 215
           G+ YYRYKLWLMTRPHLG PFNSPFPSSSVAMLHP PNP+TSP P
Sbjct: 181 GQSYYRYKLWLMTRPHLGGPFNSPFPSSSVAMLHPHPNPMTSPSP 213

[Close]
BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match: XP_008454822.1 (PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Cucumis melo])

HSP 1 Score: 288 bits (738), Expect = 1.12e-89
Identity = 157/225 (69.78%), Postives = 164/225 (72.89%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60
           MD QSQDYAAAS  AAYAQQ+RQ TNMQQQ PF       +     F  S+         
Sbjct: 1   MDRQSQDYAAASAMAAYAQQQRQATNMQQQQPF-----GFHGQHQQFPPSVPGP------ 60

Query: 61  VPLSPPYAAATT----------TSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSP 120
            P  PP+ A                    PPHPHLLH QQQQQPPPAFAPHLPPPMGPSP
Sbjct: 61  -PFLPPHPAMQQFPYHHPMQQQPQLHPHHPPHPHLLHFQQQQQPPPAFAPHLPPPMGPSP 120

Query: 121 FHGPYDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGE 180
           FHGPYDSAPPP V PPSD +LQKRIDKLVEYIIKNGPEFESMIREKQQDNP YGFLFGGE
Sbjct: 121 FHGPYDSAPPPQVSPPSDPELQKRIDKLVEYIIKNGPEFESMIREKQQDNPAYGFLFGGE 180

Query: 181 GKGYYRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPPP 215
           G+ YYRYKLWLMTRPHLG PFNSPFPSSSVAMLHP PNP+TSP P
Sbjct: 181 GQSYYRYKLWLMTRPHLGGPFNSPFPSSSVAMLHPHPNPMTSPSP 213

[Close]
BLAST of MELO3C003615.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q8IWX8 (Calcium homeostasis endoplasmic reticulum protein OS=Homo sapiens OX=9606 GN=CHERP PE=1 SV=3)

HSP 1 Score: 72.8 bits (177), Expect = 5.8e-12
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 125 PPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLWLMTR 184
           PP D +L+  IDKL +++ +NGPEFE M  EKQ+DNP + FLFGGE   YY+ KL L  +
Sbjct: 6   PPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEFYSYYKCKLALEQQ 65

Query: 185 PHLGEPFNSPFPSSSVAMLHPRPNPVTSP 214
             + +           A + P P P  +P
Sbjct: 66  QLICKQQTPEL--EPAATMPPLPQPPLAP 92

[Close]
BLAST of MELO3C003615.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q8CGZ0 (Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus OX=10090 GN=Cherp PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.6e-12
Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 0 

Query: 125 PPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLWL 182
           PP D +L+  IDKL +++ +NGPEFE M  EKQ+DNP + FLFGGE   YY+ KL L
Sbjct: 6   PPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEFYSYYKCKLAL 62

[Close]
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5A7TBI9 (Calcium homeostasis endoplasmic reticulum protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002950 PE=4 SV=1)

HSP 1 Score: 432 bits (1112), Expect = 2.32e-151
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60
           MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT
Sbjct: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60

Query: 61  VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP 120
           VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP
Sbjct: 61  VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP 120

Query: 121 PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW 180
           PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW
Sbjct: 121 PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW 180

Query: 181 LMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPP 214
           LMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPP
Sbjct: 181 LMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPP 214

[Close]
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5D3E6C6 (Calcium homeostasis endoplasmic reticulum protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006620 PE=4 SV=1)

HSP 1 Score: 403 bits (1036), Expect = 6.05e-140
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60
           MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT
Sbjct: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60

Query: 61  VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP 120
           VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP
Sbjct: 61  VPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPP 120

Query: 121 PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW 180
           PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW
Sbjct: 121 PPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLW 180

Query: 181 LMTRPHLGEPFNSPFPSSSVAMLH 204
           LMTRPHLGEPFNSPFPSSS + L+
Sbjct: 181 LMTRPHLGEPFNSPFPSSSASPLN 204

[Close]
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match: A0A0A0KSG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G215110 PE=4 SV=1)

HSP 1 Score: 291 bits (746), Expect = 3.16e-91
Identity = 158/225 (70.22%), Postives = 165/225 (73.33%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60
           MD QSQDYAAAS  AAYAQQ+RQ TNMQQQ PF       +     F  S+         
Sbjct: 1   MDRQSQDYAAASAMAAYAQQQRQATNMQQQQPF-----GFHGQHQQFPPSVPGP------ 60

Query: 61  VPLSPPYAAATT----------TSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSP 120
            P  PP+ A                    PPHPHLLH QQQQQPPPAFAPHLPPPMGPSP
Sbjct: 61  -PFLPPHPAMQQFPYHHPMQQQPQLHPHHPPHPHLLHFQQQQQPPPAFAPHLPPPMGPSP 120

Query: 121 FHGPYDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGE 180
           FHGPYDSAPPP VPPPSD +LQKRIDKLVEYIIKNGPEFESMIREKQQDNP YGFLFGGE
Sbjct: 121 FHGPYDSAPPPQVPPPSDPELQKRIDKLVEYIIKNGPEFESMIREKQQDNPAYGFLFGGE 180

Query: 181 GKGYYRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPPP 215
           G+ YYRYKLWLMTRPHLG PFNSPFPSSSVAMLHP PNP+TSP P
Sbjct: 181 GQSYYRYKLWLMTRPHLGGPFNSPFPSSSVAMLHPHPNPMTSPSP 213

[Close]
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5A7T2P6 (Calcium homeostasis endoplasmic reticulum protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00010 PE=4 SV=1)

HSP 1 Score: 288 bits (738), Expect = 4.87e-90
Identity = 157/225 (69.78%), Postives = 164/225 (72.89%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60
           MD QSQDYAAAS  AAYAQQ+RQ TNMQQQ PF       +     F  S+         
Sbjct: 1   MDRQSQDYAAASAMAAYAQQQRQATNMQQQQPF-----GFHGQHQQFPPSVPGP------ 60

Query: 61  VPLSPPYAAATT----------TSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSP 120
            P  PP+ A                    PPHPHLLH QQQQQPPPAFAPHLPPPMGPSP
Sbjct: 61  -PFLPPHPAMQQFPYHHPMQQQPQLHPHHPPHPHLLHFQQQQQPPPAFAPHLPPPMGPSP 120

Query: 121 FHGPYDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGE 180
           FHGPYDSAPPP V PPSD +LQKRIDKLVEYIIKNGPEFESMIREKQQDNP YGFLFGGE
Sbjct: 121 FHGPYDSAPPPQVSPPSDPELQKRIDKLVEYIIKNGPEFESMIREKQQDNPAYGFLFGGE 180

Query: 181 GKGYYRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPPP 215
           G+ YYRYKLWLMTRPHLG PFNSPFPSSSVAMLHP PNP+TSP P
Sbjct: 181 GQSYYRYKLWLMTRPHLGGPFNSPFPSSSVAMLHPHPNPMTSPSP 213

[Close]
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match: A0A1S3BZ08 (calcium homeostasis endoplasmic reticulum protein-like OS=Cucumis melo OX=3656 GN=LOC103495133 PE=4 SV=1)

HSP 1 Score: 288 bits (738), Expect = 5.44e-90
Identity = 157/225 (69.78%), Postives = 164/225 (72.89%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYAT 60
           MD QSQDYAAAS  AAYAQQ+RQ TNMQQQ PF       +     F  S+         
Sbjct: 1   MDRQSQDYAAASAMAAYAQQQRQATNMQQQQPF-----GFHGQHQQFPPSVPGP------ 60

Query: 61  VPLSPPYAAATT----------TSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSP 120
            P  PP+ A                    PPHPHLLH QQQQQPPPAFAPHLPPPMGPSP
Sbjct: 61  -PFLPPHPAMQQFPYHHPMQQQPQLHPHHPPHPHLLHFQQQQQPPPAFAPHLPPPMGPSP 120

Query: 121 FHGPYDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGE 180
           FHGPYDSAPPP V PPSD +LQKRIDKLVEYIIKNGPEFESMIREKQQDNP YGFLFGGE
Sbjct: 121 FHGPYDSAPPPQVSPPSDPELQKRIDKLVEYIIKNGPEFESMIREKQQDNPAYGFLFGGE 180

Query: 181 GKGYYRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPPP 215
           G+ YYRYKLWLMTRPHLG PFNSPFPSSSVAMLHP PNP+TSP P
Sbjct: 181 GQSYYRYKLWLMTRPHLGGPFNSPFPSSSVAMLHPHPNPMTSPSP 213

[Close]
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match: AT4G31200.2 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 107/219 (48.86%), Postives = 127/219 (57.99%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTN-MQQQLPFVIFMANINNILHLFQVSLSYRQSCYA 60
           MD +  DYAA+S      QQ++Q  N  QQQ P   F        H          +   
Sbjct: 1   MDRRQHDYAASSGLPYAQQQQQQGPNFQQQQQPQFGF--------HPQHPQYPSPMNASG 60

Query: 61  TVPLSP-----PYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGP 120
            +P  P     PY             PHP    +  QQQ P AF PHLPP   P PF GP
Sbjct: 61  FIPPHPSMQQFPYQHPMHQQQQPQHLPHPPHPQMFGQQQ-PQAFLPHLPPHHLPPPFPGP 120

Query: 121 YDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGY 180
           YDSAPPP  PPP+D +LQKRIDKLVEY +KNGPEFE+M+R++Q+DNP Y FLFGGEG GY
Sbjct: 121 YDSAPPP--PPPADPELQKRIDKLVEYSVKNGPEFEAMMRDRQKDNPDYAFLFGGEGHGY 180

Query: 181 YRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSP 214
           YRYK +L   P  G PF+ PFPSSS+ M+H  PNP+ SP
Sbjct: 181 YRYKHFLSMHPP-GGPFDPPFPSSSMPMIHHPPNPMMSP 207

[Close]
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match: AT4G31200.3 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 107/219 (48.86%), Postives = 127/219 (57.99%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTN-MQQQLPFVIFMANINNILHLFQVSLSYRQSCYA 60
           MD +  DYAA+S      QQ++Q  N  QQQ P   F        H          +   
Sbjct: 1   MDRRQHDYAASSGLPYAQQQQQQGPNFQQQQQPQFGF--------HPQHPQYPSPMNASG 60

Query: 61  TVPLSP-----PYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGP 120
            +P  P     PY             PHP    +  QQQ P AF PHLPP   P PF GP
Sbjct: 61  FIPPHPSMQQFPYQHPMHQQQQPQHLPHPPHPQMFGQQQ-PQAFLPHLPPHHLPPPFPGP 120

Query: 121 YDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGY 180
           YDSAPPP  PPP+D +LQKRIDKLVEY +KNGPEFE+M+R++Q+DNP Y FLFGGEG GY
Sbjct: 121 YDSAPPP--PPPADPELQKRIDKLVEYSVKNGPEFEAMMRDRQKDNPDYAFLFGGEGHGY 180

Query: 181 YRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSP 214
           YRYK +L   P  G PF+ PFPSSS+ M+H  PNP+ SP
Sbjct: 181 YRYKHFLSMHPP-GGPFDPPFPSSSMPMIHHPPNPMMSP 207

[Close]
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match: AT4G31200.1 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 107/219 (48.86%), Postives = 127/219 (57.99%), Query Frame = 0 

Query: 1   MDGQSQDYAAASTTAAYAQQRRQTTN-MQQQLPFVIFMANINNILHLFQVSLSYRQSCYA 60
           MD +  DYAA+S      QQ++Q  N  QQQ P   F        H          +   
Sbjct: 1   MDRRQHDYAASSGLPYAQQQQQQGPNFQQQQQPQFGF--------HPQHPQYPSPMNASG 60

Query: 61  TVPLSP-----PYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGP 120
            +P  P     PY             PHP    +  QQQ P AF PHLPP   P PF GP
Sbjct: 61  FIPPHPSMQQFPYQHPMHQQQQPQHLPHPPHPQMFGQQQ-PQAFLPHLPPHHLPPPFPGP 120

Query: 121 YDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGY 180
           YDSAPPP  PPP+D +LQKRIDKLVEY +KNGPEFE+M+R++Q+DNP Y FLFGGEG GY
Sbjct: 121 YDSAPPP--PPPADPELQKRIDKLVEYSVKNGPEFEAMMRDRQKDNPDYAFLFGGEGHGY 180

Query: 181 YRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSP 214
           YRYK +L   P  G PF+ PFPSSS+ M+H  PNP+ SP
Sbjct: 181 YRYKHFLSMHPP-GGPFDPPFPSSSMPMIHHPPNPMMSP 207

[Close]
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match: AT5G23080.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06
Identity = 27/76 (35.53%), Postives = 40/76 (52.63%), Query Frame = 0 

Query: 111 FHGPYDS------APPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYG 170
           F GP ++      + PP VPPP+D  L+  I+    ++ + G  +E + REK Q N  + 
Sbjct: 376 FSGPLEAETKPTVSAPPEVPPPADNNLKLLIEGFATFVSRCGKLYEDLSREKNQSNQLFD 435

Query: 171 FLFGGEGKGYYRYKLW 181
           FL  G G  YY  +LW
Sbjct: 436 FLREGNGHDYYARRLW 451

[Close]
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match: AT5G23080.2 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06
Identity = 27/76 (35.53%), Postives = 40/76 (52.63%), Query Frame = 0 

Query: 111 FHGPYDS------APPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYG 170
           F GP ++      + PP VPPP+D  L+  I+    ++ + G  +E + REK Q N  + 
Sbjct: 346 FSGPLEAETKPTVSAPPEVPPPADNNLKLLIEGFATFVSRCGKLYEDLSREKNQSNQLFD 405

Query: 171 FLFGGEGKGYYRYKLW 181
           FL  G G  YY  +LW
Sbjct: 406 FLREGNGHDYYARRLW 421

The following BLAST results are available for this feature:
BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0038745.14.78e-151100.00calcium homeostasis endoplasmic reticulum protein [Cucumis melo var. makuwa][more]
TYK31358.11.25e-13998.04calcium homeostasis endoplasmic reticulum protein [Cucumis melo var. makuwa][more]
XP_004148173.16.52e-9170.22calcium homeostasis endoplasmic reticulum protein [Cucumis sativus] >KGN50691.1 ... [more]
KAA0035891.11.01e-8969.78calcium homeostasis endoplasmic reticulum protein-like [Cucumis melo var. makuwa... [more]
XP_008454822.11.12e-8969.78PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Cucumis melo][more]
BLAST of MELO3C003615.jh1.t2 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8IWX85.8e-1241.57Calcium homeostasis endoplasmic reticulum protein OS=Homo sapiens OX=9606 GN=CHE... [more]
Q8CGZ07.6e-1256.14Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus OX=10090 GN=Ch... [more]
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TBI92.32e-151100.00Calcium homeostasis endoplasmic reticulum protein OS=Cucumis melo var. makuwa OX... [more]
A0A5D3E6C66.05e-14098.04Calcium homeostasis endoplasmic reticulum protein OS=Cucumis melo var. makuwa OX... [more]
A0A0A0KSG03.16e-9170.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G215110 PE=4 SV=1[more]
A0A5A7T2P64.87e-9069.78Calcium homeostasis endoplasmic reticulum protein-like OS=Cucumis melo var. maku... [more]
A0A1S3BZ085.44e-9069.78calcium homeostasis endoplasmic reticulum protein-like OS=Cucumis melo OX=3656 G... [more]
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G31200.22.0e-3948.86SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [more]
AT4G31200.32.0e-3948.86SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [more]
AT4G31200.12.0e-3948.86SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [more]
AT5G23080.11.7e-0635.53SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [more]
AT5G23080.21.7e-0635.53SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000061SWAP/SurpSMARTSM00648surpneu2coord: 132..184
e-value: 1.1E-14
score: 64.7
IPR000061SWAP/SurpPFAMPF01805Surpcoord: 135..180
e-value: 4.1E-11
score: 42.7
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 134..178
score: 12.708691
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790Surp modulecoord: 86..186
e-value: 2.3E-20
score: 74.1
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 112..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..128
IPR039037Calcium homeostasis endoplasmic reticulum proteinPANTHERPTHR12323SR-RELATED CTD ASSOCIATED FACTOR 6coord: 124..207

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C003615.jh1MELO3C003615.jh1gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C003615.jh1.t2.exonMELO3C003615.jh1.t2.exonexon
MELO3C003615.jh1.t2.exonMELO3C003615.jh1.t2.exon_2exon
MELO3C003615.jh1.t2.exonMELO3C003615.jh1.t2.exon_3exon
MELO3C003615.jh1.t2.exonMELO3C003615.jh1.t2.exon_4exon


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C003615.jh1.t2.start_codonMELO3C003615.jh1.t2.start_codonstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C003615.jh1.t2.cdsMELO3C003615.jh1.t2.cdsCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C003615.jh1.t2.stop_codonMELO3C003615.jh1.t2.stop_codonstop_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C003615.jh1.t2MELO3C003615.jh1.t2-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006874 cellular calcium ion homeostasis
biological_process GO:0006396 RNA processing
molecular_function GO:0003723 RNA binding