MELO.jh030162.1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview
NameMELO.jh030162.1.t1
TypemRNA
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionPre-mRNA-processing-splicing factor
Locationchr01: 25426184 .. 25429009 (+)
Sequence length1886
RNA-Seq ExpressionMELO.jh030162.1.t1
SyntenyMELO.jh030162.1.t1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTCCCCAATTCTACTTCTTCCCAAATTTTCTCTAATCAATTGCACGACGCTCCCCTTCTTGGCAATCACTGCGCGAGTCTTCCCTCCACCACCCAAGCTCCAAACGACCGGTCGACGAACGATCTCACATCACGGACGTTCCACGGTACACAAACGTTCACGCACAGGCACTGCGCTGCAGAAGACCCACTCCACTCCACCACAACGTAGACGCTCCACCACAGTCGTTCACGCACAGGCTCCACCTCGCATGGCTGAGGACGGCTGTAGACCTTCTTGCTCCATGACCCAAGTTGCAAACCTTCTTGCTTCACCACGGACGAATGCGCACGGCTGACGGTCTGGTTGAGGGTTTTATGATGGTTGGAGGTTTTATTTTACTATGCTGATTAAACTTAGGAAGTGTCGTTGAATATAAAAAAGTTTATTCCCTGTTTTTGTCAGCGTAATTAAATTTGTTTGCCTATAGTTAGATTATATAAAACTTCCATCTTACGTAAAACATGAATGCACACACAAGTTCTCGTGATGTGGTTTGTTCATCCCTCATGTCGCTTATGAACAATTTTGCTTCAGTAGACTATTTTGTTTCAATTCAAACATGAAATGGAATTAATATAGTTCAAACACTGAGGATTTTGCCATGATGGTATAAGGAGTTTTGTCATAAGAGAAAGAGAGCTTTGAAGAGATTTTTCTTCAATAATAAACAGCAGCAGACTTTGAAGGAAAAAAAATGTAAGTATGTTGTACTAATTTTGGAATTTCTTATATCAAATATCTGAATACATTTGTGATTTATGGTTGATGCTTCTTGAATTTAAACACTTTGTTGCAATTGTATAATTAGACTTATAACTTTGTAATTGTTTCAGGTTTCCTCCAGTTATTTTCTATACTTCCAAGGAAATTTGAGTTCTTGGCATGTTATCCATGGGCCACATATTAATCCCACAAAGTGATCTTCAGTACAGTAGTAGACAAATGTTGGTGTAGCCCATTTTAGGAGTGGAATGAGCCACGAAGAGGATCGGCTTATTCCTAACCTTTACTAATATATGCAGGTGAGATTCATTTCCAATCTAGTGATATACTGTGTATATAAGAATGTGCTTCGTATTTTGCTTATACTTGGTGAATTTTTCAATTTTTATACAACCTTGGGAAAGTGAGTTCATATATTCACAGCGGGTATGGGCTGAAAATCCTCTTAAGAGGCAGGAAGCTCAGGCCAGAAAGAACTGAGCTTGTCGGTTGGTGACTATGTCATTGTGCGAAACCTATTTTTTATTTTCTTGAGGCAACTTTCTCTATTTTTTATTTTCAAGTTTGCAGTCATAACCTTGGGAAGTAGTTGTAGACTATGTTTGTATGTGAAATCTTAAAGGTTTTCAAAAGGGCTTGCTCATGTTGATTACATGCTCAACCATTTTCTAGAGGTATGTTGTTTTTATTGCAATACTTTTCTGACATTCATAATGCTCATACTTCTATTCTGTTAGTTTAGGTGACTCCTTTTCATGGCAATTATACTTCTGGTATTGTGCTGTACCATCTCATGTTTAATTTCTGATTTCTAATTATTGTTTGTACAAAGAAATATAATATATATTGATATATGCAGGCTATCGCTGTAGTGAAGCAAGCATTGGACGTTGACCCTACAAACTAAGAGATGCTTCATGCACTTGGTGTGAGTCATGCAAATGGTCAGTTGTTGCTTCCTTATCTAATTACATGTTGTATATGATGTATATTCACTAAAAGCAATTTTTCTAATTATCTTGGCTGAATGACAATTGTTAACAGGGCTGGGTTTTTGTTGTGAGTTTGCATATAAATTATATGTAGCTTCGCCAGACTTTAATTTAGTTTCAAAATTTCACTTTCTTTGATCACTTTCTTAGAGCTGTGGATTTCTGTACCACTGTCACTTTGTTTTCCTTGATATAATGTGACCAAATGAAGGTTTATCATGGCTACCTGGCAAGTTCTTATCATTCAGGGATCATTTCTGGGTTTATGTTGATATCTCAGTATTTGGGGAGTTTGGCATCAACTGGAACAATAGTCAGTTCACTGTCTTGGATCCTTCAATGATCTCGTCCTATCTTTAAAATGCAAACTAGTACTTTTCTACAAACAATATAGTTGTTTAATCTTGATCATAGAGAAAAGTAGAATCCTACCAAGTACCACCTTAAACTCAGTTAACCACTTCCTTATTTCTTGTATATAAACAAATCATTCTTTAGAAGTCCTCTCCTGCTATTCATGTCTTATATGCGTATCTTTTTCTCTCGTTTCTTTCCTGTTACAACTTCCCACTGAGTTGAACTAGCTGTTCTTGCCTGTTCCAACTTTCCTACTTTCTTTCATTGCACTTTCTATCTCAAAAGTATGGGCGATCTGTTCACATTTCAGGTTCATATTGTTGATGGGATTCAATTTGTTAATTCGGTATGTTGTGTTTAAATGATTGTTTGAATTATTTTATACAATTCAAGTAATTAAAGTATTAACTTCAATATTTTGGGATTCATATTAGATTGATACAAGGAGCTCATATAGTCAATTCGAGTTGGACGAAATGCAAATGAAGCTAGCTGATTTTTTGGGTGGCCACATGTGATTATGGTGATAGCTAAGTTCTTTTGGGTTAGATAGATAAGTTTTGTAGGTGAACTAGTTTTGTTGATATTTTGTTGATACTAGATATAGGTGAAAGACAAGTTTTGATATGATACACCTTTAGGCTACACATATTTTGTTTATATCGACATAGATGGAAAGTTTATACTATTGTTAGAAGTTTGGGCTGCA

mRNA sequence

TTTTTCCCCAATTCTACTTCTTCCCAAATTTTCTCTAATCAATTGCACGACGCTCCCCTTCTTGGCAATCACTGCGCGAGTCTTCCCTCCACCACCCAAGCTCCAAACGACCGGTCGACGAACGATCTCACATCACGGACGTTCCACGGTACACAAACGTTCACGCACAGGCACTGCGCTGCAGAAGACCCACTCCACTCCACCACAACGTAGACGCTCCACCACAGTCGTTCACGCACAGGCTCCACCTCGCATGGCTGAGGACGGCTGTAGACCTTCTTGCTCCATGACCCAAGTTGCAAACCTTCTTGCTTCACCACGGACGAATGCGCACGGCTGACGGTCTGGTTGAGGGTTTTATGATGGTTGGAGGTTTTATTTTACTATGCTGATTAAACTTAGGAAGTGTCGTTGAATATAAAAAAGTTTATTCCCTGTTTTTGTCAGCGTAATTAAATTTGTTTGCCTATAGTTAGATTATATAAAACTTCCATCTTACGTAAAACATGAATGCACACACAAGTTCTCGTGATGTGGTTTGTTCATCCCTCATGTCGCTTATGAACAATTTTGCTTCAGTAGACTATTTTGTTTCAATTCAAACATGAAATGGAATTAATATAGTTCAAACACTGAGGATTTTGCCATGATGGTATAAGGAGTTTTGTCATAAGAGAAAGAGAGCTTTGAAGAGATTTTTCTTCAATAATAAACAGCAGCAGACTTTGAAGGAAAAAAAATGTTTCCTCCAGTTATTTTCTATACTTCCAAGGAAATTTGAGTTCTTGGCATGTTATCCATGGGCCACATATTAATCCCACAAAGTGATCTTCAGTACAGTAGTAGACAAATGTTGGTGTAGCCCATTTTAGGAGTGGAATGAGCCACGAAGAGGATCGGCTTATTCCTAACCTTTACTAATATATGCAGGTGAGATTCATTTCCAATCTAGTGATATACTGTGTATATAAGAATGTGCTTCGTATTTTGCTTATACTTGGTGAATTTTTCAATTTTTATACAACCTTGGGAAAGTGAGTTCATATATTCACAGCGGGTATGGGCTGAAAATCCTCTTAAGAGGCAGGAAGCTCAGGCCAGAAAGAACTGAGCTTGTCGGTTGGTGACTATGTCATTGTGCGAAACCTATTTTTTATTTTCTTGAGGCAACTTTCTCTATTTTTTATTTTCAAGTTTGCAGTCATAACCTTGGGAAGTAGTTGTAGACTATGTTTGTATGTGAAATCTTAAAGGTTTTCAAAAGGGCTTGCTCATGTTGATTACATGCTCAACCATTTTCTAGAGGTATGTTGTTTTTATTGCAATACTTTTCTGACATTCATAATGCTCATACTTCTATTCTGTTAGTTTAGGTGACTCCTTTTCATGGCAATTATACTTCTGGTATTGTGCTGTACCATCTCATGTTTAATTTCTGATTTCTAATTATTGTTTGTACAAAGAAATATAATATATATTGATATATGCAGGCTATCGCTGTAGTGAAGCAAGCATTGGACGTTGACCCTACAAACTAAGAGATGCTTCATGCACTTGGTGTGAGTCATGCAAATGGTTCATATTGTTGATGGGATTCAATTTGTTAATTCGATTGATACAAGGAGCTCATATAGTCAATTCGAGTTGGACGAAATGCAAATGAAGCTAGCTGATTTTTTGGGTGGCCACATGTGATTATGGTGATAGCTAAGTTCTTTTGGGTTAGATAGATAAGTTTTGTAGGTGAACTAGTTTTGTTGATATTTTGTTGATACTAGATATAGGTGAAAGACAAGTTTTGATATGATACACCTTTAGGCTACACATATTTTGTTTATATCGACATAGATGGAAAGTTTATACTATTGTTAGAAGTTTGGGCTGCA

Coding sequence (CDS)

ATGTGCTTCGTATTTTGCTTATACTTGGTGAATTTTTCAATTTTTATACAACCTTGGGAAAGTGAGTTCATATATTCACAGCGGGTATGGGCTGAAAATCCTCTTAAGAGGCAGGAAGCTCAGGCCAGAAAGAACTGA

Protein sequence

MCFVFCLYLVNFSIFIQPWESEFIYSQRVWAENPLKRQEAQARKN
Homology
[Close]
BLAST of MELO.jh030162.1.t1 vs. NCBI nr
Match: TKR89951.1 (hypothetical protein D5086_0000238440 [Populus alba])

HSP 1 Score: 51.2 bits (121), Expect = 9.67e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 11 NFSIFIQPWESEFIYSQRVWAENPLKRQEAQA 42
          N   +IQPWESEFI SQRVWAE  LKRQEAQA
Sbjct: 34 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQA 65

[Close]
BLAST of MELO.jh030162.1.t1 vs. NCBI nr
Match: XP_019086590.1 (PREDICTED: pre-mRNA-processing-splicing factor 8A-like [Camelina sativa])

HSP 1 Score: 51.2 bits (121), Expect = 9.67e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 11 NFSIFIQPWESEFIYSQRVWAENPLKRQEAQA 42
          N   +IQPWESEFI SQRVWAE  LKRQEAQA
Sbjct: 61 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQA 92

[Close]
BLAST of MELO.jh030162.1.t1 vs. NCBI nr
Match: KAF3610918.1 (hypothetical protein DY000_02049031 [Brassica cretica])

HSP 1 Score: 51.2 bits (121), Expect = 9.68e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 11 NFSIFIQPWESEFIYSQRVWAENPLKRQEAQA 42
          N   +IQPWESEFI SQRVWAE  LKRQEAQA
Sbjct: 41 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQA 72

[Close]
BLAST of MELO.jh030162.1.t1 vs. NCBI nr
Match: MCH80400.1 (pre-mRNA-processing-splicing factor 8-like [Trifolium medium])

HSP 1 Score: 51.2 bits (121), Expect = 9.68e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 11  NFSIFIQPWESEFIYSQRVWAENPLKRQEAQA 42
           N   +IQPWESEFI SQRVWAE  LKRQEAQA
Sbjct: 631 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQA 662

[Close]
BLAST of MELO.jh030162.1.t1 vs. NCBI nr
Match: KAG4199018.1 (hypothetical protein ERO13_A05G122801v2 [Gossypium hirsutum])

HSP 1 Score: 51.2 bits (121), Expect = 9.68e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 11  NFSIFIQPWESEFIYSQRVWAENPLKRQEAQA 42
           N   +IQPWESEFI SQRVWAE  LKRQEAQA
Sbjct: 470 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQA 501

[Close]
BLAST of MELO.jh030162.1.t1 vs. ExPASy Swiss-Prot
Match: Q9SSD2 (Pre-mRNA-processing-splicing factor 8A OS=Arabidopsis thaliana OX=3702 GN=PRP8A PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.7e-06
Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 11   NFSIFIQPWESEFIYSQRVWAENPLKRQEAQAR 44
            N   +IQPWESEFI SQRVWAE  LKRQEAQA+
Sbjct: 1391 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQ 1423

[Close]
BLAST of MELO.jh030162.1.t1 vs. ExPASy Swiss-Prot
Match: Q9T0I6 (Pre-mRNA-processing-splicing factor 8B OS=Arabidopsis thaliana OX=3702 GN=PRP8B PE=3 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 2.7e-06
Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 11   NFSIFIQPWESEFIYSQRVWAENPLKRQEAQAR 44
            N   +IQPWESEFI SQRVWAE  LKRQEAQA+
Sbjct: 1393 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQ 1425

[Close]
BLAST of MELO.jh030162.1.t1 vs. ExPASy Swiss-Prot
Match: Q6P2Q9 (Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens OX=9606 GN=PRPF8 PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 2.3e-05
Identity = 24/33 (72.73%), Postives = 26/33 (78.79%), Query Frame = 0 

Query: 11   NFSIFIQPWESEFIYSQRVWAENPLKRQEAQAR 44
            N   +IQPWESEFI SQRVWAE  LKRQEA A+
Sbjct: 1367 NLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQ 1399

[Close]
BLAST of MELO.jh030162.1.t1 vs. ExPASy Swiss-Prot
Match: Q99PV0 (Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 2.3e-05
Identity = 24/33 (72.73%), Postives = 26/33 (78.79%), Query Frame = 0 

Query: 11   NFSIFIQPWESEFIYSQRVWAENPLKRQEAQAR 44
            N   +IQPWESEFI SQRVWAE  LKRQEA A+
Sbjct: 1367 NLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQ 1399

[Close]
BLAST of MELO.jh030162.1.t1 vs. ExPASy Swiss-Prot
Match: O14187 (Pre-mRNA-splicing factor spp42 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp42 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 5.1e-05
Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 0 

Query: 11   NFSIFIQPWESEFIYSQRVWAENPLKRQEA 41
            N   +IQPWESEFI SQRVWAE  +KRQEA
Sbjct: 1391 NLYRYIQPWESEFIDSQRVWAEYAMKRQEA 1420

[Close]
BLAST of MELO.jh030162.1.t1 vs. ExPASy TrEMBL
Match: A0A4U5P2X2 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000238440 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.68e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 11 NFSIFIQPWESEFIYSQRVWAENPLKRQEAQA 42
          N   +IQPWESEFI SQRVWAE  LKRQEAQA
Sbjct: 34 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQA 65

[Close]
BLAST of MELO.jh030162.1.t1 vs. ExPASy TrEMBL
Match: A0A392LZG4 (Pre-mRNA-processing-splicing factor 8-like (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001168 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.69e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 11  NFSIFIQPWESEFIYSQRVWAENPLKRQEAQA 42
           N   +IQPWESEFI SQRVWAE  LKRQEAQA
Sbjct: 631 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQA 662

[Close]
BLAST of MELO.jh030162.1.t1 vs. ExPASy TrEMBL
Match: A0A6G1DHY5 (Uncharacterized protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_014059 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.69e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 11  NFSIFIQPWESEFIYSQRVWAENPLKRQEAQA 42
           N   +IQPWESEFI SQRVWAE  LKRQEAQA
Sbjct: 302 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQA 333

[Close]
BLAST of MELO.jh030162.1.t1 vs. ExPASy TrEMBL
Match: A0A398AMK3 (MPN domain-containing protein OS=Brassica campestris OX=3711 GN=BRARA_A01074 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.69e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 11  NFSIFIQPWESEFIYSQRVWAENPLKRQEAQA 42
           N   +IQPWESEFI SQRVWAE  LKRQEAQA
Sbjct: 393 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQA 424

[Close]
BLAST of MELO.jh030162.1.t1 vs. ExPASy TrEMBL
Match: A0A6A6KW32 (MPN domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_038771 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.69e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 11 NFSIFIQPWESEFIYSQRVWAENPLKRQEAQA 42
          N   +IQPWESEFI SQRVWAE  LKRQEAQA
Sbjct: 11 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQA 42

[Close]
BLAST of MELO.jh030162.1.t1 vs. TAIR 10
Match: AT1G80070.1 (Pre-mRNA-processing-splicing factor )

HSP 1 Score: 51.6 bits (122), Expect = 1.9e-07
Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 11   NFSIFIQPWESEFIYSQRVWAENPLKRQEAQAR 44
            N   +IQPWESEFI SQRVWAE  LKRQEAQA+
Sbjct: 1391 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQ 1423

[Close]
BLAST of MELO.jh030162.1.t1 vs. TAIR 10
Match: AT4G38780.1 (Pre-mRNA-processing-splicing factor )

HSP 1 Score: 51.6 bits (122), Expect = 1.9e-07
Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 11   NFSIFIQPWESEFIYSQRVWAENPLKRQEAQAR 44
            N   +IQPWESEFI SQRVWAE  LKRQEAQA+
Sbjct: 1366 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQ 1398

The following BLAST results are available for this feature:
BLAST of MELO.jh030162.1.t1 vs. NCBI nr
Match NameE-valueIdentityDescription
TKR89951.19.67e-0678.13hypothetical protein D5086_0000238440 [Populus alba][more]
XP_019086590.19.67e-0678.13PREDICTED: pre-mRNA-processing-splicing factor 8A-like [Camelina sativa][more]
KAF3610918.19.68e-0678.13hypothetical protein DY000_02049031 [Brassica cretica][more]
MCH80400.19.68e-0678.13pre-mRNA-processing-splicing factor 8-like [Trifolium medium][more]
KAG4199018.19.68e-0678.13hypothetical protein ERO13_A05G122801v2 [Gossypium hirsutum][more]
BLAST of MELO.jh030162.1.t1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SSD22.7e-0675.76Pre-mRNA-processing-splicing factor 8A OS=Arabidopsis thaliana OX=3702 GN=PRP8A ... [more]
Q9T0I62.7e-0675.76Pre-mRNA-processing-splicing factor 8B OS=Arabidopsis thaliana OX=3702 GN=PRP8B ... [more]
Q6P2Q92.3e-0572.73Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens OX=9606 GN=PRPF8 PE=1 SV=2[more]
Q99PV02.3e-0572.73Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=... [more]
O141875.1e-0573.33Pre-mRNA-splicing factor spp42 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2... [more]
BLAST of MELO.jh030162.1.t1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A4U5P2X24.68e-0678.13Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000238440 PE=4 SV=1[more]
A0A392LZG44.69e-0678.13Pre-mRNA-processing-splicing factor 8-like (Fragment) OS=Trifolium medium OX=970... [more]
A0A6G1DHY54.69e-0678.13Uncharacterized protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_014... [more]
A0A398AMK34.69e-0678.13MPN domain-containing protein OS=Brassica campestris OX=3711 GN=BRARA_A01074 PE=... [more]
A0A6A6KW324.69e-0678.13MPN domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_038771 PE=4... [more]
BLAST of MELO.jh030162.1.t1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G80070.11.9e-0775.76Pre-mRNA-processing-splicing factor [more]
AT4G38780.11.9e-0775.76Pre-mRNA-processing-splicing factor [more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO.jh030162.1MELO.jh030162.1gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh030162.1.t1.exonMELO.jh030162.1.t1.exonexon
MELO.jh030162.1.t1.exonMELO.jh030162.1.t1.exon_2exon
MELO.jh030162.1.t1.exonMELO.jh030162.1.t1.exon_3exon
MELO.jh030162.1.t1.exonMELO.jh030162.1.t1.exon_4exon


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh030162.1.t1.start_codonMELO.jh030162.1.t1.start_codonstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh030162.1.t1.cdsMELO.jh030162.1.t1.cdsCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh030162.1.t1.stop_codonMELO.jh030162.1.t1.stop_codonstop_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO.jh030162.1.t1MELO.jh030162.1.t1-proteinpolypeptide