MELO.jh030162.1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTCCCCAATTCTACTTCTTCCCAAATTTTCTCTAATCAATTGCACGACGCTCCCCTTCTTGGCAATCACTGCGCGAGTCTTCCCTCCACCACCCAAGCTCCAAACGACCGGTCGACGAACGATCTCACATCACGGACGTTCCACGGTACACAAACGTTCACGCACAGGCACTGCGCTGCAGAAGACCCACTCCACTCCACCACAACGTAGACGCTCCACCACAGTCGTTCACGCACAGGCTCCACCTCGCATGGCTGAGGACGGCTGTAGACCTTCTTGCTCCATGACCCAAGTTGCAAACCTTCTTGCTTCACCACGGACGAATGCGCACGGCTGACGGTCTGGTTGAGGGTTTTATGATGGTTGGAGGTTTTATTTTACTATGCTGATTAAACTTAGGAAGTGTCGTTGAATATAAAAAAGTTTATTCCCTGTTTTTGTCAGCGTAATTAAATTTGTTTGCCTATAGTTAGATTATATAAAACTTCCATCTTACGTAAAACATGAATGCACACACAAGTTCTCGTGATGTGGTTTGTTCATCCCTCATGTCGCTTATGAACAATTTTGCTTCAGTAGACTATTTTGTTTCAATTCAAACATGAAATGGAATTAATATAGTTCAAACACTGAGGATTTTGCCATGATGGTATAAGGAGTTTTGTCATAAGAGAAAGAGAGCTTTGAAGAGATTTTTCTTCAATAATAAACAGCAGCAGACTTTGAAGGAAAAAAAATGTAAGTATGTTGTACTAATTTTGGAATTTCTTATATCAAATATCTGAATACATTTGTGATTTATGGTTGATGCTTCTTGAATTTAAACACTTTGTTGCAATTGTATAATTAGACTTATAACTTTGTAATTGTTTCAGGTTTCCTCCAGTTATTTTCTATACTTCCAAGGAAATTTGAGTTCTTGGCATGTTATCCATGGGCCACATATTAATCCCACAAAGTGATCTTCAGTACAGTAGTAGACAAATGTTGGTGTAGCCCATTTTAGGAGTGGAATGAGCCACGAAGAGGATCGGCTTATTCCTAACCTTTACTAATATATGCAGGTGAGATTCATTTCCAATCTAGTGATATACTGTGTATATAAGAATGTGCTTCGTATTTTGCTTATACTTGGTGAATTTTTCAATTTTTATACAACCTTGGGAAAGTGAGTTCATATATTCACAGCGGGTATGGGCTGAAAATCCTCTTAAGAGGCAGGAAGCTCAGGCCAGAAAGAACTGAGCTTGTCGGTTGGTGACTATGTCATTGTGCGAAACCTATTTTTTATTTTCTTGAGGCAACTTTCTCTATTTTTTATTTTCAAGTTTGCAGTCATAACCTTGGGAAGTAGTTGTAGACTATGTTTGTATGTGAAATCTTAAAGGTTTTCAAAAGGGCTTGCTCATGTTGATTACATGCTCAACCATTTTCTAGAGGTATGTTGTTTTTATTGCAATACTTTTCTGACATTCATAATGCTCATACTTCTATTCTGTTAGTTTAGGTGACTCCTTTTCATGGCAATTATACTTCTGGTATTGTGCTGTACCATCTCATGTTTAATTTCTGATTTCTAATTATTGTTTGTACAAAGAAATATAATATATATTGATATATGCAGGCTATCGCTGTAGTGAAGCAAGCATTGGACGTTGACCCTACAAACTAAGAGATGCTTCATGCACTTGGTGTGAGTCATGCAAATGGTCAGTTGTTGCTTCCTTATCTAATTACATGTTGTATATGATGTATATTCACTAAAAGCAATTTTTCTAATTATCTTGGCTGAATGACAATTGTTAACAGGGCTGGGTTTTTGTTGTGAGTTTGCATATAAATTATATGTAGCTTCGCCAGACTTTAATTTAGTTTCAAAATTTCACTTTCTTTGATCACTTTCTTAGAGCTGTGGATTTCTGTACCACTGTCACTTTGTTTTCCTTGATATAATGTGACCAAATGAAGGTTTATCATGGCTACCTGGCAAGTTCTTATCATTCAGGGATCATTTCTGGGTTTATGTTGATATCTCAGTATTTGGGGAGTTTGGCATCAACTGGAACAATAGTCAGTTCACTGTCTTGGATCCTTCAATGATCTCGTCCTATCTTTAAAATGCAAACTAGTACTTTTCTACAAACAATATAGTTGTTTAATCTTGATCATAGAGAAAAGTAGAATCCTACCAAGTACCACCTTAAACTCAGTTAACCACTTCCTTATTTCTTGTATATAAACAAATCATTCTTTAGAAGTCCTCTCCTGCTATTCATGTCTTATATGCGTATCTTTTTCTCTCGTTTCTTTCCTGTTACAACTTCCCACTGAGTTGAACTAGCTGTTCTTGCCTGTTCCAACTTTCCTACTTTCTTTCATTGCACTTTCTATCTCAAAAGTATGGGCGATCTGTTCACATTTCAGGTTCATATTGTTGATGGGATTCAATTTGTTAATTCGGTATGTTGTGTTTAAATGATTGTTTGAATTATTTTATACAATTCAAGTAATTAAAGTATTAACTTCAATATTTTGGGATTCATATTAGATTGATACAAGGAGCTCATATAGTCAATTCGAGTTGGACGAAATGCAAATGAAGCTAGCTGATTTTTTGGGTGGCCACATGTGATTATGGTGATAGCTAAGTTCTTTTGGGTTAGATAGATAAGTTTTGTAGGTGAACTAGTTTTGTTGATATTTTGTTGATACTAGATATAGGTGAAAGACAAGTTTTGATATGATACACCTTTAGGCTACACATATTTTGTTTATATCGACATAGATGGAAAGTTTATACTATTGTTAGAAGTTTGGGCTGCA TTTTTCCCCAATTCTACTTCTTCCCAAATTTTCTCTAATCAATTGCACGACGCTCCCCTTCTTGGCAATCACTGCGCGAGTCTTCCCTCCACCACCCAAGCTCCAAACGACCGGTCGACGAACGATCTCACATCACGGACGTTCCACGGTACACAAACGTTCACGCACAGGCACTGCGCTGCAGAAGACCCACTCCACTCCACCACAACGTAGACGCTCCACCACAGTCGTTCACGCACAGGCTCCACCTCGCATGGCTGAGGACGGCTGTAGACCTTCTTGCTCCATGACCCAAGTTGCAAACCTTCTTGCTTCACCACGGACGAATGCGCACGGCTGACGGTCTGGTTGAGGGTTTTATGATGGTTGGAGGTTTTATTTTACTATGCTGATTAAACTTAGGAAGTGTCGTTGAATATAAAAAAGTTTATTCCCTGTTTTTGTCAGCGTAATTAAATTTGTTTGCCTATAGTTAGATTATATAAAACTTCCATCTTACGTAAAACATGAATGCACACACAAGTTCTCGTGATGTGGTTTGTTCATCCCTCATGTCGCTTATGAACAATTTTGCTTCAGTAGACTATTTTGTTTCAATTCAAACATGAAATGGAATTAATATAGTTCAAACACTGAGGATTTTGCCATGATGGTATAAGGAGTTTTGTCATAAGAGAAAGAGAGCTTTGAAGAGATTTTTCTTCAATAATAAACAGCAGCAGACTTTGAAGGAAAAAAAATGTTTCCTCCAGTTATTTTCTATACTTCCAAGGAAATTTGAGTTCTTGGCATGTTATCCATGGGCCACATATTAATCCCACAAAGTGATCTTCAGTACAGTAGTAGACAAATGTTGGTGTAGCCCATTTTAGGAGTGGAATGAGCCACGAAGAGGATCGGCTTATTCCTAACCTTTACTAATATATGCAGGTGAGATTCATTTCCAATCTAGTGATATACTGTGTATATAAGAATGTGCTTCGTATTTTGCTTATACTTGGTGAATTTTTCAATTTTTATACAACCTTGGGAAAGTGAGTTCATATATTCACAGCGGGTATGGGCTGAAAATCCTCTTAAGAGGCAGGAAGCTCAGGCCAGAAAGAACTGAGCTTGTCGGTTGGTGACTATGTCATTGTGCGAAACCTATTTTTTATTTTCTTGAGGCAACTTTCTCTATTTTTTATTTTCAAGTTTGCAGTCATAACCTTGGGAAGTAGTTGTAGACTATGTTTGTATGTGAAATCTTAAAGGTTTTCAAAAGGGCTTGCTCATGTTGATTACATGCTCAACCATTTTCTAGAGGTATGTTGTTTTTATTGCAATACTTTTCTGACATTCATAATGCTCATACTTCTATTCTGTTAGTTTAGGTGACTCCTTTTCATGGCAATTATACTTCTGGTATTGTGCTGTACCATCTCATGTTTAATTTCTGATTTCTAATTATTGTTTGTACAAAGAAATATAATATATATTGATATATGCAGGCTATCGCTGTAGTGAAGCAAGCATTGGACGTTGACCCTACAAACTAAGAGATGCTTCATGCACTTGGTGTGAGTCATGCAAATGGTTCATATTGTTGATGGGATTCAATTTGTTAATTCGATTGATACAAGGAGCTCATATAGTCAATTCGAGTTGGACGAAATGCAAATGAAGCTAGCTGATTTTTTGGGTGGCCACATGTGATTATGGTGATAGCTAAGTTCTTTTGGGTTAGATAGATAAGTTTTGTAGGTGAACTAGTTTTGTTGATATTTTGTTGATACTAGATATAGGTGAAAGACAAGTTTTGATATGATACACCTTTAGGCTACACATATTTTGTTTATATCGACATAGATGGAAAGTTTATACTATTGTTAGAAGTTTGGGCTGCA ATGTGCTTCGTATTTTGCTTATACTTGGTGAATTTTTCAATTTTTATACAACCTTGGGAAAGTGAGTTCATATATTCACAGCGGGTATGGGCTGAAAATCCTCTTAAGAGGCAGGAAGCTCAGGCCAGAAAGAACTGA MCFVFCLYLVNFSIFIQPWESEFIYSQRVWAENPLKRQEAQARKN Homology
BLAST of MELO.jh030162.1 vs. NCBI nr
Match: TKR89951.1 (hypothetical protein D5086_0000238440 [Populus alba]) HSP 1 Score: 51.2 bits (121), Expect = 9.67e-06 Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. NCBI nr
Match: XP_019086590.1 (PREDICTED: pre-mRNA-processing-splicing factor 8A-like [Camelina sativa]) HSP 1 Score: 51.2 bits (121), Expect = 9.67e-06 Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. NCBI nr
Match: KAF3610918.1 (hypothetical protein DY000_02049031 [Brassica cretica]) HSP 1 Score: 51.2 bits (121), Expect = 9.68e-06 Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. NCBI nr
Match: MCH80400.1 (pre-mRNA-processing-splicing factor 8-like [Trifolium medium]) HSP 1 Score: 51.2 bits (121), Expect = 9.68e-06 Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. NCBI nr
Match: KAG4199018.1 (hypothetical protein ERO13_A05G122801v2 [Gossypium hirsutum]) HSP 1 Score: 51.2 bits (121), Expect = 9.68e-06 Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. ExPASy Swiss-Prot
Match: Q9SSD2 (Pre-mRNA-processing-splicing factor 8A OS=Arabidopsis thaliana OX=3702 GN=PRP8A PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.7e-06 Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. ExPASy Swiss-Prot
Match: Q9T0I6 (Pre-mRNA-processing-splicing factor 8B OS=Arabidopsis thaliana OX=3702 GN=PRP8B PE=3 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 2.7e-06 Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. ExPASy Swiss-Prot
Match: Q6P2Q9 (Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens OX=9606 GN=PRPF8 PE=1 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 2.3e-05 Identity = 24/33 (72.73%), Postives = 26/33 (78.79%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. ExPASy Swiss-Prot
Match: Q99PV0 (Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 2.3e-05 Identity = 24/33 (72.73%), Postives = 26/33 (78.79%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. ExPASy Swiss-Prot
Match: O14187 (Pre-mRNA-splicing factor spp42 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp42 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 5.1e-05 Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. ExPASy TrEMBL
Match: A0A4U5P2X2 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000238440 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 4.68e-06 Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. ExPASy TrEMBL
Match: A0A392LZG4 (Pre-mRNA-processing-splicing factor 8-like (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001168 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 4.69e-06 Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. ExPASy TrEMBL
Match: A0A6G1DHY5 (Uncharacterized protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_014059 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 4.69e-06 Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. ExPASy TrEMBL
Match: A0A398AMK3 (MPN domain-containing protein OS=Brassica campestris OX=3711 GN=BRARA_A01074 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 4.69e-06 Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. ExPASy TrEMBL
Match: A0A6A6KW32 (MPN domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_038771 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 4.69e-06 Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. TAIR 10
Match: AT1G80070.1 (Pre-mRNA-processing-splicing factor ) HSP 1 Score: 51.6 bits (122), Expect = 1.9e-07 Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0
BLAST of MELO.jh030162.1 vs. TAIR 10
Match: AT4G38780.1 (Pre-mRNA-processing-splicing factor ) HSP 1 Score: 51.6 bits (122), Expect = 1.9e-07 Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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