MELO.jh028025.1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TGATATTGTATTTGTCCGAAGAAGGATCGGACAGGTTGGAGTTCTTACCTTCTTCGGACTCTATGGACCAAGATCTGCTTTCATTATATGGGCAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATGTTCAAGATCTCTTTTCCATTTCTATTTACCCAGTTCATATCTTTCTTTCGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAAGAGCGGCCAGAGGGTCAAATAGGTCGGGAAGAAAGAGTCTGAGGTCGGTTCGGACCTCCACT TGATATTGTATTTGTCCGAAGAAGGATCGGACAGGTTGGAGTTCTTACCTTCTTCGGACTCTATGGACCAAGATCTGCTTTCATTATATGGGCAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATGTTCAAGATCTCTTTTCCATTTCTATTTACCCAGTTCATATCTTTCTTTCGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAAGAGCGGCCAGAGGGTCAAATAGGTCGGGAAGAAAGAGTCTGAGGTCGGTTCGGACCTCCACT ATGGACCAAGATCTGCTTTCATTATATGGGCAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATGTTCAAGATCTCTTTTCCATTTCTATTTACCCAGTTCATATCTTTCTTTCGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAA MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK Homology
BLAST of MELO.jh028025.1.t1 vs. NCBI nr
Match: AEN56113.1 (hypothetical protein [Cucumis melo subsp. melo] >AZP40279.1 ribosomal protein L10 [Cucumis melo var. momordica] >KAA0059076.1 ribosomal protein L10 [Cucumis melo var. makuwa]) HSP 1 Score: 130 bits (327), Expect = 7.07e-37 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of MELO.jh028025.1.t1 vs. NCBI nr
Match: YP_004849327.1 (ribosomal protein L10 [Cucumis sativus] >ADZ10754.1 ribosomal protein L10 [Cucumis sativus]) HSP 1 Score: 130 bits (327), Expect = 7.50e-37 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of MELO.jh028025.1.t1 vs. NCBI nr
Match: YP_009913631.1 (ribosomal protein L10 [Luffa acutangula] >QLJ93021.1 ribosomal protein L10 [Luffa acutangula]) HSP 1 Score: 122 bits (307), Expect = 7.29e-34 Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of MELO.jh028025.1.t1 vs. NCBI nr
Match: YP_009306149.1 (ribosomal protein L10 [Corchorus olitorius] >AOO95984.1 ribosomal protein L10 [Corchorus olitorius]) HSP 1 Score: 114 bits (284), Expect = 2.52e-30 Identity = 56/64 (87.50%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of MELO.jh028025.1.t1 vs. NCBI nr
Match: QEX95855.1 (ribosomal protein L10 [Cercis canadensis]) HSP 1 Score: 112 bits (279), Expect = 1.41e-29 Identity = 55/64 (85.94%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of MELO.jh028025.1.t1 vs. ExPASy TrEMBL
Match: A0A5A7UY09 (Ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold47200G00020 PE=4 SV=1) HSP 1 Score: 130 bits (327), Expect = 3.42e-37 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of MELO.jh028025.1.t1 vs. ExPASy TrEMBL
Match: G3EU29 (Uncharacterized protein ORF2 OS=Cucumis melo subsp. melo OX=412675 GN=ORF2 PE=4 SV=1) HSP 1 Score: 130 bits (327), Expect = 3.42e-37 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of MELO.jh028025.1.t1 vs. ExPASy TrEMBL
Match: A0A3Q9CRZ2 (Ribosomal protein L10 OS=Cucumis melo var. momordica OX=2034244 GN=rpl10 PE=4 SV=1) HSP 1 Score: 130 bits (327), Expect = 3.42e-37 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of MELO.jh028025.1.t1 vs. ExPASy TrEMBL
Match: G3EIX9 (Ribosomal protein L10 OS=Cucumis sativus OX=3659 GN=rpl10 PE=4 SV=1) HSP 1 Score: 130 bits (327), Expect = 3.63e-37 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of MELO.jh028025.1.t1 vs. ExPASy TrEMBL
Match: A0A7D5Y0N6 (Ribosomal protein L10 OS=Luffa acutangula OX=56866 GN=rpl10 PE=4 SV=1) HSP 1 Score: 122 bits (307), Expect = 3.53e-34 Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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