MELO.jh028025.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh028025.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRibosomal protein L10
Locationscaffold_mitochondria: 909684 .. 909993 (-)
RNA-Seq ExpressionMELO.jh028025.1
SyntenyMELO.jh028025.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATATTGTATTTGTCCGAAGAAGGATCGGACAGGTTGGAGTTCTTACCTTCTTCGGACTCTATGGACCAAGATCTGCTTTCATTATATGGGCAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATGTTCAAGATCTCTTTTCCATTTCTATTTACCCAGTTCATATCTTTCTTTCGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAAGAGCGGCCAGAGGGTCAAATAGGTCGGGAAGAAAGAGTCTGAGGTCGGTTCGGACCTCCACT

mRNA sequence

TGATATTGTATTTGTCCGAAGAAGGATCGGACAGGTTGGAGTTCTTACCTTCTTCGGACTCTATGGACCAAGATCTGCTTTCATTATATGGGCAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATGTTCAAGATCTCTTTTCCATTTCTATTTACCCAGTTCATATCTTTCTTTCGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAAGAGCGGCCAGAGGGTCAAATAGGTCGGGAAGAAAGAGTCTGAGGTCGGTTCGGACCTCCACT

Coding sequence (CDS)

ATGGACCAAGATCTGCTTTCATTATATGGGCAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATGTTCAAGATCTCTTTTCCATTTCTATTTACCCAGTTCATATCTTTCTTTCGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAA

Protein sequence

MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Homology
[Close]
BLAST of MELO.jh028025.1 vs. NCBI nr
Match: AEN56113.1 (hypothetical protein [Cucumis melo subsp. melo] >AZP40279.1 ribosomal protein L10 [Cucumis melo var. momordica] >KAA0059076.1 ribosomal protein L10 [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (327), Expect = 7.07e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1   MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 60
           MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP
Sbjct: 101 MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 160

[Close]
BLAST of MELO.jh028025.1 vs. NCBI nr
Match: YP_004849327.1 (ribosomal protein L10 [Cucumis sativus] >ADZ10754.1 ribosomal protein L10 [Cucumis sativus])

HSP 1 Score: 130 bits (327), Expect = 7.50e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1   MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 60
           MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP
Sbjct: 103 MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 162

[Close]
BLAST of MELO.jh028025.1 vs. NCBI nr
Match: YP_009913631.1 (ribosomal protein L10 [Luffa acutangula] >QLJ93021.1 ribosomal protein L10 [Luffa acutangula])

HSP 1 Score: 122 bits (307), Expect = 7.29e-34
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 1   MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 60
           MDQDLLSLYGQYRSTLVDHMDVEKASDLNE   SLFHFYLPSSYLSFVCSREEFDLGIPP
Sbjct: 99  MDQDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPP 158

[Close]
BLAST of MELO.jh028025.1 vs. NCBI nr
Match: YP_009306149.1 (ribosomal protein L10 [Corchorus olitorius] >AOO95984.1 ribosomal protein L10 [Corchorus olitorius])

HSP 1 Score: 114 bits (284), Expect = 2.52e-30
Identity = 56/64 (87.50%), Postives = 57/64 (89.06%), Query Frame = 0 

Query: 1   MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDL---G 60
           MDQDLLSLYGQYRSTLVDHMDVEKASD +E   SLFHFYLPSSYLSFVCSREEFDL   G
Sbjct: 100 MDQDLLSLYGQYRSTLVDHMDVEKASDFDELETSLFHFYLPSSYLSFVCSREEFDLFNPG 159

[Close]
BLAST of MELO.jh028025.1 vs. NCBI nr
Match: QEX95855.1 (ribosomal protein L10 [Cercis canadensis])

HSP 1 Score: 112 bits (279), Expect = 1.41e-29
Identity = 55/64 (85.94%), Postives = 56/64 (87.50%), Query Frame = 0 

Query: 1   MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDL---G 60
           MDQDLLSLYGQYRSTLVDHMDVEKASD +E   SLFHFYLPSSYL FVCSREEFDL   G
Sbjct: 99  MDQDLLSLYGQYRSTLVDHMDVEKASDFDELETSLFHFYLPSSYLCFVCSREEFDLFNLG 158

[Close]
BLAST of MELO.jh028025.1 vs. ExPASy TrEMBL
Match: A0A5A7UY09 (Ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold47200G00020 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 3.42e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1   MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 60
           MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP
Sbjct: 101 MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 160

[Close]
BLAST of MELO.jh028025.1 vs. ExPASy TrEMBL
Match: G3EU29 (Uncharacterized protein ORF2 OS=Cucumis melo subsp. melo OX=412675 GN=ORF2 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 3.42e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1   MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 60
           MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP
Sbjct: 101 MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 160

[Close]
BLAST of MELO.jh028025.1 vs. ExPASy TrEMBL
Match: A0A3Q9CRZ2 (Ribosomal protein L10 OS=Cucumis melo var. momordica OX=2034244 GN=rpl10 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 3.42e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1   MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 60
           MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP
Sbjct: 101 MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 160

[Close]
BLAST of MELO.jh028025.1 vs. ExPASy TrEMBL
Match: G3EIX9 (Ribosomal protein L10 OS=Cucumis sativus OX=3659 GN=rpl10 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 3.63e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1   MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 60
           MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP
Sbjct: 103 MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 162

[Close]
BLAST of MELO.jh028025.1 vs. ExPASy TrEMBL
Match: A0A7D5Y0N6 (Ribosomal protein L10 OS=Luffa acutangula OX=56866 GN=rpl10 PE=4 SV=1)

HSP 1 Score: 122 bits (307), Expect = 3.53e-34
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 1   MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPP 60
           MDQDLLSLYGQYRSTLVDHMDVEKASDLNE   SLFHFYLPSSYLSFVCSREEFDLGIPP
Sbjct: 99  MDQDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPP 158

The following BLAST results are available for this feature:
BLAST of MELO.jh028025.1 vs. NCBI nr
Match NameE-valueIdentityDescription
AEN56113.17.07e-37100.00hypothetical protein [Cucumis melo subsp. melo] >AZP40279.1 ribosomal protein L1... [more]
YP_004849327.17.50e-37100.00ribosomal protein L10 [Cucumis sativus] >ADZ10754.1 ribosomal protein L10 [Cucum... [more]
YP_009913631.17.29e-3495.08ribosomal protein L10 [Luffa acutangula] >QLJ93021.1 ribosomal protein L10 [Luff... [more]
YP_009306149.12.52e-3087.50ribosomal protein L10 [Corchorus olitorius] >AOO95984.1 ribosomal protein L10 [C... [more]
QEX95855.11.41e-2985.94ribosomal protein L10 [Cercis canadensis][more]
BLAST of MELO.jh028025.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh028025.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UY093.42e-37100.00Ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold47... [more]
G3EU293.42e-37100.00Uncharacterized protein ORF2 OS=Cucumis melo subsp. melo OX=412675 GN=ORF2 PE=4 ... [more]
A0A3Q9CRZ23.42e-37100.00Ribosomal protein L10 OS=Cucumis melo var. momordica OX=2034244 GN=rpl10 PE=4 SV... [more]
G3EIX93.63e-37100.00Ribosomal protein L10 OS=Cucumis sativus OX=3659 GN=rpl10 PE=4 SV=1[more]
A0A7D5Y0N63.53e-3495.08Ribosomal protein L10 OS=Luffa acutangula OX=56866 GN=rpl10 PE=4 SV=1[more]
BLAST of MELO.jh028025.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh028025.1.t1MELO.jh028025.1.t1mRNA