MELO.jh015526.1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCATACAAATCTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAACTATAGTAAAGATATTACACGATGACACAGTTGAATCGTACGTATGCATTGGTTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCCAAGTATGATCAGTTTTTTATGTCAAATTTTTATTGATTTGCAGACAGATGTGGATAGACTAATATCACAATCTATCTAGATAGATGTGGATATTCTTTCTATTCTTTTTTGTTTCTGCTGATAGAAATGTGTTTTTAATTATTATAGGTACATGTACTGCTTTAGAAATGGATGATAGTGGTCATTTCAAGTTTTGTTTTATGGCTTTTGGTGCATCAATTGAAGGGTGGAAATATTATAGACTTATTATTTCTGTTGATAGGACATTTTTGAAG ATGCCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCATACAAATCTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAACTATAGTAAAGATATTACACGATGACACAGTTGAATCGTACGTATGCATTGGTTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCCAAAAATGGATGATAGTGGTCATTTCAAGTTTTGTTTTATGGCTTTTGGTGCATCAATTGAAGGGTGGAAATATTATAGACTTATTATTTCTGTTGATAGGACATTTTTGAAG ATGACACAGTTGAATCGTACGTATGCATTGGTTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCCAAAAATGGATGATAGTGGTCATTTCAAGTTTTGTTTTATGGCTTTTGGTGCATCAATTGAAGGGTGGAAATATTATAGACTTATTATTTCTGTTGATAGGACATTTTTGAAG MTQLNRTYALVPRFFDKLVESNPKMDDSGHFKFCFMAFGASIEGWKYYRLIISVDRTFLK Homology
BLAST of MELO.jh015526.1.t1 vs. NCBI nr
Match: TYK01612.1 (uncharacterized protein E5676_scaffold451G002110 [Cucumis melo var. makuwa]) HSP 1 Score: 94.7 bits (234), Expect = 5.78e-23 Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of MELO.jh015526.1.t1 vs. NCBI nr
Match: KAA0035384.1 (protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa] >TYK03496.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 7.91e-23 Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of MELO.jh015526.1.t1 vs. NCBI nr
Match: KAA0065300.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK24167.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 1.49e-22 Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of MELO.jh015526.1.t1 vs. NCBI nr
Match: KAA0041797.1 (protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa] >TYK27086.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 3.35e-22 Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of MELO.jh015526.1.t1 vs. NCBI nr
Match: KAA0047748.1 (uncharacterized protein E6C27_scaffold1059G00070 [Cucumis melo var. makuwa] >TYK02382.1 uncharacterized protein E5676_scaffold155G00850 [Cucumis melo var. makuwa]) HSP 1 Score: 95.5 bits (236), Expect = 6.42e-22 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 0
BLAST of MELO.jh015526.1.t1 vs. ExPASy TrEMBL
Match: A0A5D3BS45 (MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002110 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.80e-23 Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of MELO.jh015526.1.t1 vs. ExPASy TrEMBL
Match: A0A5D3BZ76 (Protein FAR-RED IMPAIRED RESPONSE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001160 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.83e-23 Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of MELO.jh015526.1.t1 vs. ExPASy TrEMBL
Match: A0A5A7VDN9 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1425G00040 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 7.21e-23 Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of MELO.jh015526.1.t1 vs. ExPASy TrEMBL
Match: A0A5A7TJB7 (Protein FAR1-RELATED SEQUENCE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00980 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.62e-22 Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of MELO.jh015526.1.t1 vs. ExPASy TrEMBL
Match: A0A5D3BUA2 (MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00850 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 3.11e-22 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|