MC11g0462.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTTTCAGCTTTCTCGGCATCGGCAGGTTGCTTCAATTCCACTACAGTAAAAGGTAACGTTCTCATTCTTGAGAAAAATTCTCGTAGTGAACTTTAAAAACAATCTGCAATTTCTCAGTATTCTCATTTGGCAATCGAATTCCGCAGCAATTGGAGGTTGTAGCAACCATAAGCTCAACCTGATTGACAACGGTCTCCACTATTCTCCAGCTGCTCGATTCCCTCACCTGAATGGCAAGGTTCTGCTTCTCCTGTTTTGATTTTTTTGTTTTCCGATTACTCAGAAATGAAGCGGAATATATATTTGTAATCTCCGGATAATTATTTGAAATGTTGTTATTGATGGAAACTGAAAATGCTCGATCAAATAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCATGATTTGTGGCGATTGTGATGGCAATGGTAAGCCGATTTCTAAGTTGCTGCGAATGATATAGGTTTTGCGAACGCTGAATTTCTTTTAATATATGTAATTTGAATTAAACAGGTGCTGTTCTTTGCTCACAATGCAAAGGAAGTGGAGTAAATCCTGCCGACGTATTCAATGGTCAGTTCAAAGCCGGCGAATCTTGCTGGCTATGCGGGTAATTTGCTCCCTTCTGTTCATCAGTAGCTCAATCTTTTTAGTTCAACTATTTAATTCAGCATCCAAATTACAACTGCAGAAGAAATGGATAAGTTCTTTTAACTTGCAATTAACTGATATCCTGAGCTGCTTCTGTTTTTCTCATATTATTTTCCTTGAAAATGTGAATTCTACATATGTCTGTGCTACTGCTGCCCCAGAAGATCTTCTTCTGATCAATGGCTTTTGTGATGCAGTGGGAAAAAGGATATGCTGTGCGGGAATTGCAATGGAGCTGGCTTCATTGGAGGTTTCCTCAGCACTTATGATCAA ATGGCGTTTTCAGCTTTCTCGGCATCGGCAGGTTGCTTCAATTCCACTACAGTAAAAGCAATTGGAGGTTGTAGCAACCATAAGCTCAACCTGATTGACAACGGTCTCCACTATTCTCCAGCTGCTCGATTCCCTCACCTGAATGGCAAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCATGATTTGTGGCGATTGTGATGGCAATGGTGCTGTTCTTTGCTCACAATGCAAAGGAAGTGGAGTAAATCCTGCCGACGTATTCAATGGTCAGTTCAAAGCCGGCGAATCTTGCTGGCTATGCGGTGGGAAAAAGGATATGCTGTGCGGGAATTGCAATGGAGCTGGCTTCATTGGAGGTTTCCTCAGCACTTATGATCAA ATGGCGTTTTCAGCTTTCTCGGCATCGGCAGGTTGCTTCAATTCCACTACAGTAAAAGCAATTGGAGGTTGTAGCAACCATAAGCTCAACCTGATTGACAACGGTCTCCACTATTCTCCAGCTGCTCGATTCCCTCACCTGAATGGCAAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCATGATTTGTGGCGATTGTGATGGCAATGGTGCTGTTCTTTGCTCACAATGCAAAGGAAGTGGAGTAAATCCTGCCGACGTATTCAATGGTCAGTTCAAAGCCGGCGAATCTTGCTGGCTATGCGGTGGGAAAAAGGATATGCTGTGCGGGAATTGCAATGGAGCTGGCTTCATTGGAGGTTTCCTCAGCACTTATGATCAA MAFSAFSASAGCFNSTTVKAIGGCSNHKLNLIDNGLHYSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGFIGGFLSTYDQ Homology
BLAST of MC11g0462.1 vs. ExPASy Swiss-Prot
Match: Q9SN73 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BSD2 PE=1 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 5.0e-29 Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of MC11g0462.1 vs. ExPASy Swiss-Prot
Match: Q9XF14 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.0e-26 Identity = 49/84 (58.33%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of MC11g0462.1 vs. NCBI nr
Match: XP_022148277.1 (uncharacterized protein LOC111016947 [Momordica charantia]) HSP 1 Score: 276 bits (707), Expect = 5.36e-94 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of MC11g0462.1 vs. NCBI nr
Match: XP_038899028.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 217 bits (553), Expect = 1.76e-70 Identity = 105/131 (80.15%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of MC11g0462.1 vs. NCBI nr
Match: KAA0038807.1 (chaperone protein DnaJ-like [Cucumis melo var. makuwa]) HSP 1 Score: 212 bits (540), Expect = 1.69e-68 Identity = 103/131 (78.63%), Postives = 112/131 (85.50%), Query Frame = 0
BLAST of MC11g0462.1 vs. NCBI nr
Match: XP_004136477.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X2 [Cucumis sativus] >KGN60105.1 hypothetical protein Csa_001346 [Cucumis sativus]) HSP 1 Score: 212 bits (540), Expect = 1.75e-68 Identity = 104/132 (78.79%), Postives = 111/132 (84.09%), Query Frame = 0
BLAST of MC11g0462.1 vs. NCBI nr
Match: XP_008466412.1 (PREDICTED: chaperone protein DnaJ-like [Cucumis melo] >TYK31430.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa]) HSP 1 Score: 211 bits (536), Expect = 6.89e-68 Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 0
BLAST of MC11g0462.1 vs. ExPASy TrEMBL
Match: A0A6J1D4M9 (uncharacterized protein LOC111016947 OS=Momordica charantia OX=3673 GN=LOC111016947 PE=4 SV=1) HSP 1 Score: 276 bits (707), Expect = 2.60e-94 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of MC11g0462.1 vs. ExPASy TrEMBL
Match: A0A5A7TB44 (Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003640 PE=4 SV=1) HSP 1 Score: 212 bits (540), Expect = 8.19e-69 Identity = 103/131 (78.63%), Postives = 112/131 (85.50%), Query Frame = 0
BLAST of MC11g0462.1 vs. ExPASy TrEMBL
Match: A0A0A0LDP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878740 PE=4 SV=1) HSP 1 Score: 212 bits (540), Expect = 8.46e-69 Identity = 104/132 (78.79%), Postives = 111/132 (84.09%), Query Frame = 0
BLAST of MC11g0462.1 vs. ExPASy TrEMBL
Match: A0A5D3E725 (Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007410 PE=4 SV=1) HSP 1 Score: 211 bits (536), Expect = 3.33e-68 Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 0
BLAST of MC11g0462.1 vs. ExPASy TrEMBL
Match: A0A1S3CSH4 (chaperone protein DnaJ-like OS=Cucumis melo OX=3656 GN=LOC103503827 PE=4 SV=1) HSP 1 Score: 211 bits (536), Expect = 3.33e-68 Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 0
BLAST of MC11g0462.1 vs. TAIR 10
Match: AT3G47650.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein ) HSP 1 Score: 128.6 bits (322), Expect = 3.5e-30 Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of MC11g0462.1 vs. TAIR 10
Match: AT5G17840.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 1.9e-04 Identity = 20/58 (34.48%), Postives = 29/58 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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