MC09g_new0094.1 (mRNA) Bitter gourd (Dali-11) v1

Overview
NameMC09g_new0094.1
TypemRNA
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptioncytochrome P450 71A14-like
LocationMC09: 3838245 .. 3838505 (-)
Sequence length261
RNA-Seq ExpressionMC09g_new0094.1
SyntenyMC09g_new0094.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAACCTTTCAATCTGGAGATGAACTGCTCTTACGACTGAGAAAAATGGAGGCGGCCGAAGATAAGGCAATCAAACGTCGGTCGGAGACGAAGGCAAGCAGAAATGCCCGGAGAATAAGAACCGACATAAATCTCTTTTCGAAGGCGGTCAAAGATGAAATGTTCTTGCGACAAAGAAAAGCGGAGCCGACCGGAGAGGAAGACAAACAGTTGGAGAAGAGGAACATAGGGTTGGAAAAGAGGAACGAAGGGTCGTAG

mRNA sequence

ATGCAAACCTTTCAATCTGGAGATGAACTGCTCTTACGACTGAGAAAAATGGAGGCGGCCGAAGATAAGGCAATCAAACGTCGGTCGGAGACGAAGGCAAGCAGAAATGCCCGGAGAATAAGAACCGACATAAATCTCTTTTCGAAGGCGGTCAAAGATGAAATGTTCTTGCGACAAAGAAAAGCGGAGCCGACCGGAGAGGAAGACAAACAGTTGGAGAAGAGGAACATAGGGTTGGAAAAGAGGAACGAAGGGTCGTAG

Coding sequence (CDS)

ATGCAAACCTTTCAATCTGGAGATGAACTGCTCTTACGACTGAGAAAAATGGAGGCGGCCGAAGATAAGGCAATCAAACGTCGGTCGGAGACGAAGGCAAGCAGAAATGCCCGGAGAATAAGAACCGACATAAATCTCTTTTCGAAGGCGGTCAAAGATGAAATGTTCTTGCGACAAAGAAAAGCGGAGCCGACCGGAGAGGAAGACAAACAGTTGGAGAAGAGGAACATAGGGTTGGAAAAGAGGAACGAAGGGTCGTAG

Protein sequence

MQTFQSGDELLLRLRKMEAAEDKAIKRRSETKASRNARRIRTDINLFSKAVKDEMFLRQRKAEPTGEEDKQLEKRNIGLEKRNEGS
Homology
[Close]
BLAST of MC09g_new0094.1 vs. NCBI nr
Match: XP_022148552.1 (cytochrome P450 71A14-like [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 8.01e-07
Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 16 KMEAAEDKAIKRRSETKASRNARRIRTDINLFSKAVKDEMFLRQRKAEPTGEEDKQ 71
          K+   E KA + R E KA RN +RIRTD NL SKA +DEM LRQRKAE   EED+Q
Sbjct: 9  KLRWPEMKAGRCRPEKKAFRNDQRIRTDGNLLSKAARDEMLLRQRKAESAEEEDRQ 64

[Close]
BLAST of MC09g_new0094.1 vs. ExPASy TrEMBL
Match: A0A6J1D5D3 (cytochrome P450 71A14-like OS=Momordica charantia OX=3673 GN=LOC111017184 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.88e-07
Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 16 KMEAAEDKAIKRRSETKASRNARRIRTDINLFSKAVKDEMFLRQRKAEPTGEEDKQ 71
          K+   E KA + R E KA RN +RIRTD NL SKA +DEM LRQRKAE   EED+Q
Sbjct: 9  KLRWPEMKAGRCRPEKKAFRNDQRIRTDGNLLSKAARDEMLLRQRKAESAEEEDRQ 64

The following BLAST results are available for this feature:
BLAST of MC09g_new0094.1 vs.
Match NameE-valueIdentityDescription
BLAST of MC09g_new0094.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022148552.18.01e-0760.71cytochrome P450 71A14-like [Momordica charantia][more]
BLAST of MC09g_new0094.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D5D33.88e-0760.71cytochrome P450 71A14-like OS=Momordica charantia OX=3673 GN=LOC111017184 PE=3 S... [more]
BLAST of MC09g_new0094.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..86

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MC09g_new0094MC09g_new0094gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MC09g_new0094.1-cdsMC09g_new0094.1-cds-MC09:3838245..3838505CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MC09g_new0094.1MC09g_new0094.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0016491 oxidoreductase activity