MC09g_new0094 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0094
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	cytochrome P450 71A14-like
Location	MC09: 3838245 .. 3838505 (-)
RNA-Seq Expression	MC09g_new0094
Synteny	MC09g_new0094

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACCTTTCAATCTGGAGATGAACTGCTCTTACGACTGAGAAAAATGGAGGCGGCCGAAGATAAGGCAATCAAACGTCGGTCGGAGACGAAGGCAAGCAGAAATGCCCGGAGAATAAGAACCGACATAAATCTCTTTTCGAAGGCGGTCAAAGATGAAATGTTCTTGCGACAAAGAAAAGCGGAGCCGACCGGAGAGGAAGACAAACAGTTGGAGAAGAGGAACATAGGGTTGGAAAAGAGGAACGAAGGGTCGTAG

mRNA sequence

ATGCAAACCTTTCAATCTGGAGATGAACTGCTCTTACGACTGAGAAAAATGGAGGCGGCCGAAGATAAGGCAATCAAACGTCGGTCGGAGACGAAGGCAAGCAGAAATGCCCGGAGAATAAGAACCGACATAAATCTCTTTTCGAAGGCGGTCAAAGATGAAATGTTCTTGCGACAAAGAAAAGCGGAGCCGACCGGAGAGGAAGACAAACAGTTGGAGAAGAGGAACATAGGGTTGGAAAAGAGGAACGAAGGGTCGTAG

Coding sequence (CDS)

ATGCAAACCTTTCAATCTGGAGATGAACTGCTCTTACGACTGAGAAAAATGGAGGCGGCCGAAGATAAGGCAATCAAACGTCGGTCGGAGACGAAGGCAAGCAGAAATGCCCGGAGAATAAGAACCGACATAAATCTCTTTTCGAAGGCGGTCAAAGATGAAATGTTCTTGCGACAAAGAAAAGCGGAGCCGACCGGAGAGGAAGACAAACAGTTGGAGAAGAGGAACATAGGGTTGGAAAAGAGGAACGAAGGGTCGTAG

Protein sequence

MQTFQSGDELLLRLRKMEAAEDKAIKRRSETKASRNARRIRTDINLFSKAVKDEMFLRQRKAEPTGEEDKQLEKRNIGLEKRNEGS

Homology

[Close]

BLAST of MC09g_new0094 vs. NCBI nr
Match: XP_022148552.1 (cytochrome P450 71A14-like [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 8.01e-07
Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 16 KMEAAEDKAIKRRSETKASRNARRIRTDINLFSKAVKDEMFLRQRKAEPTGEEDKQ 71
          K+   E KA + R E KA RN +RIRTD NL SKA +DEM LRQRKAE   EED+Q
Sbjct: 9  KLRWPEMKAGRCRPEKKAFRNDQRIRTDGNLLSKAARDEMLLRQRKAESAEEEDRQ 64

[Close]

BLAST of MC09g_new0094 vs. ExPASy TrEMBL
Match: A0A6J1D5D3 (cytochrome P450 71A14-like OS=Momordica charantia OX=3673 GN=LOC111017184 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.88e-07
Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 16 KMEAAEDKAIKRRSETKASRNARRIRTDINLFSKAVKDEMFLRQRKAEPTGEEDKQ 71
          K+   E KA + R E KA RN +RIRTD NL SKA +DEM LRQRKAE   EED+Q
Sbjct: 9  KLRWPEMKAGRCRPEKKAFRNDQRIRTDGNLLSKAARDEMLLRQRKAESAEEEDRQ 64

The following BLAST results are available for this feature:

BLAST of MC09g_new0094 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g_new0094 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148552.1	8.01e-07	60.71	cytochrome P450 71A14-like [Momordica charantia]	[more]

BLAST of MC09g_new0094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5D3	3.88e-07	60.71	cytochrome P450 71A14-like OS=Momordica charantia OX=3673 GN=LOC111017184 PE=3 S...	[more]

BLAST of MC09g_new0094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g_new0094.1	MC09g_new0094.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding
molecular_function	GO:0016491	oxidoreductase activity