MC09g_new0012.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0012.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC09: 574792 .. 575533 (-)
Sequence length	267
RNA-Seq Expression	MC09g_new0012.1
Synteny	MC09g_new0012.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATGTCAGCAAAAACGGGCCTTAAATTTTCTCTTTATATACTCCATTTGCCTTCAAGTCTTCAACCATACAACTCCAAACCTTCTTGAGAATTGAGTCCCAAGTAAATCCTTATTCATGTAAGACTACTTTGGAAAAAAATACAAAACTTCTAATAGTTATGTGATGAGACAATCCTTTTTCAATGATCTAACAAGTTCCTTTCTTTCTGATTTGCAGTAGGAAAAAAGAGCAGAATGGTGATGAACACGAAAGCTTGTGCAGCCATATTATTGGTGGTGTTGTTCACAAGCTGTTGCTTGGTTATGCTCAGTGATGGAAAACGGGCGCTACTGATCAAACTGCAGGATGAACACCAAGAGCAACAAAAACTTGTTGAAGAGAATAATAGAAACGAAGCCAAAGGCAGCAGATTTGCAGATAATAATAACCATCATGATTGTGATAGGCATGATTATTACTGTTGGAACAAGTATGGACTGCAACATGGGAACAATAACTAAATCATTACATCAAATGTTGAGTTCAAATTAAAGGTATGATGTTGTGGTTAAATTTGTGTATAAATAAGTTATGATCCTATGCCTTGTCGTGTAAGATATGTGTTAGCAATATATGGATGAATATTGTATTGTAATATAAGAGTGGGAGTTTATTACTGTAATGGTTGAACCACGATGTAACTAACCCTACGCATTTGTATAGATGATCTTGAATTTTCTAAATGATAGTACTTTTCGG

mRNA sequence

ATGGTGATGAACACGAAAGCTTGTGCAGCCATATTATTGGTGGTGTTGTTCACAAGCTGTTGCTTGGTTATGCTCAGTGATGGAAAACGGGCGCTACTGATCAAACTGCAGGATGAACACCAAGAGCAACAAAAACTTGTTGAAGAGAATAATAGAAACGAAGCCAAAGGCAGCAGATTTGCAGATAATAATAACCATCATGATTGTGATAGGCATGATTATTACTGTTGGAACAAGTATGGACTGCAACATGGGAACAATAACTAA

Coding sequence (CDS)

ATGGTGATGAACACGAAAGCTTGTGCAGCCATATTATTGGTGGTGTTGTTCACAAGCTGTTGCTTGGTTATGCTCAGTGATGGAAAACGGGCGCTACTGATCAAACTGCAGGATGAACACCAAGAGCAACAAAAACTTGTTGAAGAGAATAATAGAAACGAAGCCAAAGGCAGCAGATTTGCAGATAATAATAACCATCATGATTGTGATAGGCATGATTATTACTGTTGGAACAAGTATGGACTGCAACATGGGAACAATAACTAA

Protein sequence

MVMNTKACAAILLVVLFTSCCLVMLSDGKRALLIKLQDEHQEQQKLVEENNRNEAKGSRFADNNNHHDCDRHDYYCWNKYGLQHGNNN

Homology

The following BLAST results are available for this feature:

BLAST of MC09g_new0012.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g_new0012.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g_new0012.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g_new0012.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..65
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..20 score: 5.0

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC09g_new0012	MC09g_new0012	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC09g_new0012.1-cds	MC09g_new0012.1-cds-MC09:575030..575296	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC09g_new0012.1	MC09g_new0012.1-protein	polypeptide