MC08g1978.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5CDSpolypeptideutr3 Hold the cursor over a type above to highlight its positions in the sequence below.GTAAATTATATACTACTAAACTTTCTTTCTTTCTTGTTCACATTTGTAAGAGGAAAGAGAGCTCCCCCATTTATTGCCACAATGATCTTAAGTGTTCATCAACTCCAATTCATCTTTGGTCTCATGGGTATTATTGTTGCATTCATTTTGTTTTTCTTTATGGAATATGGTATATGGCTTTGAGATAGGGTTAATTCCATTTCCCAAGTACTTGTAATTTATCTTATCTTTTTGCCTTTTCACTTTTTCTCTTGTAGGTAATATAATATCCTTCATGGTCTTCCTGGCTCCTGCGTAAGACGTTATGTATATTTGATATTTTGGCTATGTTTATATTTTTTACAAGTCACTTGATCGTAATTCTATGATATAGTCTTAACAACCTATTAAAAAAAATATACGTAAGATTTTGAGTTCAAATGTATAATAATCTCAATGTTTATAAGTCAACATGAACATATATATCTCAGTTAGGTCAAAATATTACTTACCTCACTAAAGGTTGGAGGTTTCAATCTCCTACTCCATTGTTGAACTAAAAAAAGAAAGCAATAAAAGTTGTTCATAGGCATATTGCAACTCTTTTAGAACCATTCTTACAATTTTTTTTAACAAAAAAAAAACAACTAAACACCAACCCAAAAACTTCTTAAAAAATAAGGCTATTATCTAGGCTATGTTTGATATTTATTTTTTTCTATTTTAAAAAATTAGGCCTAAAAACACTATTTCCATCAATGTTTTTTTTTTTTATCTATTTTGAAAAATGTTTTTAAAAACTAAAAAAGTAGTTTTTAAAAATTTATTTTTGTTTTTGAAGTTTGACTAGGAATTCATATATATATTTTTTTAAAGAAGGTGAAAAACATGCCGGTGAAAAATCAAGCATAATTATTTCAAGAATGATAAAACAACAGGGCTTTAGATAACCCTTTTTGTTTTGGTTTTTTATTTTTTTTTAAATTAACAAACACATATTCATGTCTAAAATGACACCTTTTCTCGAATCTCTTATACATCCACTTTTAAATTTTCGTCAAATTTCAAAATGATTATCAATCGAAACCTTTATCTTATAAAATTTTACACGTACTTTATTTGAATAAAAGTTGTGTGTGTTGTGTTTAGGCCAACGTTTTGGACAATTTACAAGAAGAAAACATCAGAAGGATTCCAATCGATACCTTACGTGGTGGCGCTGATGAGCGCCGTGTTGCTGCTTTATTATGCTGCCATCAAATCCAATGCCTATTTGTTAATTAGCATCAACTCCTTTGGATGTGTTATAGAACTTTTCTATATATCAATCTACGTCTTCTACGCTACTAAGAGAGACAGGGTCTCTCTCCCTCCCTCCCTTTATGTTTCATTTAATATTATCGTACAAATATGAGACGAAGATTTGAACATATGGATCGGATGTAAAAATAAAGATATATATATATGGTTTATAAGAGAATTAGTTTTGTAGGAAGAAATAATTTTAGTAAGCTTCATTTTAATGGGTGATTCTTGTTTGTGAAGGTATTCACATTGAAGTTGTTGGTGATATTCAATTTTGGGGCTTATGGAGTAATGCTGGCGATAACTATGCTTGTGTTTCATGGGAATAAGCGCACCAATGCTGTTGGATGGATTTGTGCAGCTTTCAATCTTGCTGTTTTTGCTTCTCCTTTGAGCATCATGGTTCTCTCTCTCTCCTGTCTTTTGCTTCTTCTTTGAACATCATGGCTCAAGTCTCAAAGTCCATGGTTCGATCTCCCGAGCTCAAAAAACAAAAAATTGAAACTCCCTCCTCTTCCCTCTCTCTCAAGTGGATGGTTCAATCTCCCGAGTTCAAAAAATAAAAAATTGAAACTCCGTTCCTCTTTCCCTTCTCCCTCTACATGGTTCAATCTCTCGAGCTCAAAAACAAAAAAATTGAAATTTCCTCCCTCTCTCCTTTCTCTCAGGCTGATGTTTCAATCTCCCTAGCTCAAAAAAAAAAAAAAACAGAAAATTGAAATTCCTTACCTCCCTCTCTCTGGAAAAAGGTCGATAGTTCGATCTCTCCAACTCAAAAAACAAAAATAAAATTCATTTCAATTTCAATTTTATTTATCTTATTTAGAAATTAATGTAATCAAATAAAAAGGAGTAACTTAAATTGTTTAAAAAAAATTAAAAGGAGAGTCCACTTATAAAATGTACAAAAAATAAAGAATTTTAAAGGAAAATATAGAGTGAGTTGAAAGGAATATCTTTTTTAGGTCCAAATAACTATTAAGTTTTCAGTTCTCAATTTTTAAAAGTTAAGATTTTTTTAGCTCTTAATTTATTTAACTAAATCTTGATCGAGCATTAACTTTAATTCATTAAGATAAAATTTCTTTTTTGTCTTTAAAATATTGATGTTGATAGTTATTTTTAGAAAAATTATAAAAACAAAAAAATTTCAAAAAACAAATAAAATAACAAATAAATATTTCACTCTTTTTAAATAAGTTTAATTTTATTAATATTAATATTTCGTCCATATTAGTGATATCTTGTTGATATTTTTTATATTTGTCAATGTTTTATGATACCATAGAAAATATTGATTCACCTCTTATATATGTCGATGTCAAACTCATTGACATGTAGAAATGTCAATGAAAATGTTGATATGTTGACGAAAATTTAATACCGTACTTTTTTAATATATGCAGAAGAGGGTGATAACAACCAAAAGTGTGGAGTATATGCCATTTTTTCTCTCCTTTTTTCTCACTCTTTCAGCCACCATGTGGTTCTTCTATGGCTTCTTTATGAAGGATCTATTCATTGCTGTAAGTCAAAACTACAATACTTCAAAACCTAACCCTACTTTATTTCTCATTAAATTGATTCTCCATTTAATTTCTCTTTTTTTTTCTGAATCTTTAATTATCATTAAATTTTTGCACTGCATTTAATAAAAAAGTTTGTGTGTGAGACTTTGCATGTAGATATGGAAACAAATCTCTTTTTTTCAGTACAACAAATGCGGGATGAGAAATTGAAATTTGAGCAGGGTGGAAGTAAATTTAAAACTTTTTTCCAAGGAAGTTATTGTATTTTAAATTCATAATTGCAAATATATCTTTAAAATGAACTTATAAATCACTAGTTTAGGCAACTTAGTATGTTTCTATTTGATGCGACAGAAATTAATTAACCTAAAACGATGATTATTAACTCAAATAATAATTTACTTTTTCTTTTTTTTTTTTTGAAATAGAATTAGCTATAACCATGTCACTAACCTAAATATTGATCATTAGCTATAATAATAACTGGTTGGTACATTATATATATATTTTTTTACTACATTTGCAATTATTTTATATGTAGCTAGTAGCCCAAAGAAACAAATTAAGCTCGTATTTTTCGTTTCGTATCGTTTTTTCTCAGCTTCCAAACATCGTCGGGTTTCTACTGGGGATGATCCAAATGATAATGTACATGATATACAAAGACAAAAAGGGAAATAATAAAGAAGAGAAAATTGAAGAAGGAGATGGCCAAAGTTTCTCAAGATCAGTGAAGAATCAAACAGAAAGAAAGGAGATCAATATGGCTGAAAGCAACAACAATAATAATGCATGATAATATATAAAGGGCTTCTTTGGAAATGTAGTGTAAGACAAAAGGGAAACTTCAATGAAATAATAGGTTATCTTTTAAATTCAGTTTTATAATACACCATATATGTTTTGCAATCAATTCAAGTTTATTGATAGCTTTCTATTTTTATTGATTAATTATCAATTTTTAATGGATTTAATTGTTGGTGTTAAATGGATAATCAAAAGAGAGTTTTTTTTTTTTTTTTTTAGTACCGGGTGATCGAACCCACCATCTCTTGATTTGAGATATATGTCAATTATGACTGAACTATGCTCGCTTTGACAATAATCAAGAGAGAGTTAAAGCTTATTGATTTCTTCTTTTTTTTTCTCGAGTAGATTGGATTTTATTTAAGTAAAGATTGGATTTAAATAACAGAAGCCTCACTTTGGAATATTCTAATTAAATTTTAT GTAAATTATATACTACTAAACTTTCTTTCTTTCTTGTTCACATTTGTAAGAGGAAAGAGAGCTCCCCCATTTATTGCCACAATGATCTTAAGTGTTCATCAACTCCAATTCATCTTTGGTCTCATGGGTAATATAATATCCTTCATGGTCTTCCTGGCTCCTGCGCCAACGTTTTGGACAATTTACAAGAAGAAAACATCAGAAGGATTCCAATCGATACCTTACGTGGTGGCGCTGATGAGCGCCGTGTTGCTGCTTTATTATGCTGCCATCAAATCCAATGCCTATTTGTTAATTAGCATCAACTCCTTTGGATGTGTTATAGAACTTTTCTATATATCAATCTACGTCTTCTACGCTACTAAGAGAGACAGGGTATTCACATTGAAGTTGTTGGTGATATTCAATTTTGGGGCTTATGGAGTAATGCTGGCGATAACTATGCTTGTGTTTCATGGGAATAAGCGCACCAATGCTGTTGGATGGATTTGTGCAGCTTTCAATCTTGCTGTTTTTGCTTCTCCTTTGAGCATCATGAAGAGGGTGATAACAACCAAAAGTGTGGAGTATATGCCATTTTTTCTCTCCTTTTTTCTCACTCTTTCAGCCACCATGTGGTTCTTCTATGGCTTCTTTATGAAGGATCTATTCATTGCTCTTCCAAACATCGTCGGGTTTCTACTGGGGATGATCCAAATGATAATGTACATGATATACAAAGACAAAAAGGGAAATAATAAAGAAGAGAAAATTGAAGAAGGAGATGGCCAAAGTTTCTCAAGATCAGTGAAGAATCAAACAGAAAGAAAGGAGATCAATATGGCTGAAAGCAACAACAATAATAATGCATGATAATATATAAAGGGCTTCTTTGGAAATGTAGTGTAAGACAAAAGGGAAACTTCAATGAAATAATAGGTTATCTTTTAAATTCAGTTTTATAATACACCATATATGTTTTGCAATCAATTCAAGTTTATTGATAGCTTTCTATTTTTATTGATTAATTATCAATTTTTAATGGATTTAATTGTTGGTGTTAAATGGATAATCAAAAGAGAGTTTTTTTTTTTTTTTTTTAGTACCGGGTGATCGAACCCACCATCTCTTGATTTGAGATATATGTCAATTATGACTGAACTATGCTCGCTTTGACAATAATCAAGAGAGAGTTAAAGCTTATTGATTTCTTCTTTTTTTTTCTCGAGTAGATTGGATTTTATTTAAGTAAAGATTGGATTTAAATAACAGAAGCCTCACTTTGGAATATTCTAATTAAATTTTAT ATGATCTTAAGTGTTCATCAACTCCAATTCATCTTTGGTCTCATGGGTAATATAATATCCTTCATGGTCTTCCTGGCTCCTGCGCCAACGTTTTGGACAATTTACAAGAAGAAAACATCAGAAGGATTCCAATCGATACCTTACGTGGTGGCGCTGATGAGCGCCGTGTTGCTGCTTTATTATGCTGCCATCAAATCCAATGCCTATTTGTTAATTAGCATCAACTCCTTTGGATGTGTTATAGAACTTTTCTATATATCAATCTACGTCTTCTACGCTACTAAGAGAGACAGGGTATTCACATTGAAGTTGTTGGTGATATTCAATTTTGGGGCTTATGGAGTAATGCTGGCGATAACTATGCTTGTGTTTCATGGGAATAAGCGCACCAATGCTGTTGGATGGATTTGTGCAGCTTTCAATCTTGCTGTTTTTGCTTCTCCTTTGAGCATCATGAAGAGGGTGATAACAACCAAAAGTGTGGAGTATATGCCATTTTTTCTCTCCTTTTTTCTCACTCTTTCAGCCACCATGTGGTTCTTCTATGGCTTCTTTATGAAGGATCTATTCATTGCTCTTCCAAACATCGTCGGGTTTCTACTGGGGATGATCCAAATGATAATGTACATGATATACAAAGACAAAAAGGGAAATAATAAAGAAGAGAAAATTGAAGAAGGAGATGGCCAAAGTTTCTCAAGATCAGTGAAGAATCAAACAGAAAGAAAGGAGATCAATATGGCTGAAAGCAACAACAATAATAATGCATGA MILSVHQLQFIFGLMGNIISFMVFLAPAPTFWTIYKKKTSEGFQSIPYVVALMSAVLLLYYAAIKSNAYLLISINSFGCVIELFYISIYVFYATKRDRVFTLKLLVIFNFGAYGVMLAITMLVFHGNKRTNAVGWICAAFNLAVFASPLSIMKRVITTKSVEYMPFFLSFFLTLSATMWFFYGFFMKDLFIALPNIVGFLLGMIQMIMYMIYKDKKGNNKEEKIEEGDGQSFSRSVKNQTERKEINMAESNNNNNA Homology
BLAST of MC08g1978.1 vs. ExPASy Swiss-Prot
Match: Q9FPN0 (Bidirectional sugar transporter NEC1 OS=Petunia hybrida OX=4102 GN=NEC1 PE=2 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 2.6e-69 Identity = 144/257 (56.03%), Postives = 190/257 (73.93%), Query Frame = 0
BLAST of MC08g1978.1 vs. ExPASy Swiss-Prot
Match: Q9ZV02 (Bidirectional sugar transporter SWEET9 OS=Arabidopsis thaliana OX=3702 GN=SWEET9 PE=1 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 2.4e-67 Identity = 127/213 (59.62%), Postives = 170/213 (79.81%), Query Frame = 0
BLAST of MC08g1978.1 vs. ExPASy Swiss-Prot
Match: P0DKJ5 (Bidirectional sugar transporter SWEET15 OS=Vitis vinifera OX=29760 GN=SWEET15 PE=3 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 4.0e-62 Identity = 119/221 (53.85%), Postives = 166/221 (75.11%), Query Frame = 0
BLAST of MC08g1978.1 vs. ExPASy Swiss-Prot
Match: Q2QR07 (Bidirectional sugar transporter SWEET13 OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET13 PE=2 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 8.8e-62 Identity = 122/221 (55.20%), Postives = 167/221 (75.57%), Query Frame = 0
BLAST of MC08g1978.1 vs. ExPASy Swiss-Prot
Match: Q9FY94 (Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana OX=3702 GN=SWEET15 PE=1 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 5.7e-61 Identity = 120/231 (51.95%), Postives = 173/231 (74.89%), Query Frame = 0
BLAST of MC08g1978.1 vs. NCBI nr
Match: XP_022144449.1 (bidirectional sugar transporter NEC1-like [Momordica charantia]) HSP 1 Score: 474 bits (1221), Expect = 3.58e-168 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of MC08g1978.1 vs. NCBI nr
Match: XP_038890667.1 (bidirectional sugar transporter NEC1-like [Benincasa hispida]) HSP 1 Score: 389 bits (1000), Expect = 1.73e-134 Identity = 209/254 (82.28%), Postives = 231/254 (90.94%), Query Frame = 0
BLAST of MC08g1978.1 vs. NCBI nr
Match: XP_011649027.1 (bidirectional sugar transporter NEC1 [Cucumis sativus] >KAE8651732.1 hypothetical protein Csa_005981 [Cucumis sativus]) HSP 1 Score: 380 bits (977), Expect = 7.03e-131 Identity = 205/259 (79.15%), Postives = 231/259 (89.19%), Query Frame = 0
BLAST of MC08g1978.1 vs. NCBI nr
Match: XP_038889282.1 (bidirectional sugar transporter NEC1-like [Benincasa hispida]) HSP 1 Score: 374 bits (960), Expect = 2.92e-128 Identity = 204/261 (78.16%), Postives = 231/261 (88.51%), Query Frame = 0
BLAST of MC08g1978.1 vs. NCBI nr
Match: XP_008441813.1 (PREDICTED: LOW QUALITY PROTEIN: bidirectional sugar transporter NEC1-like [Cucumis melo]) HSP 1 Score: 372 bits (954), Expect = 2.22e-127 Identity = 202/257 (78.60%), Postives = 227/257 (88.33%), Query Frame = 0
BLAST of MC08g1978.1 vs. ExPASy TrEMBL
Match: A0A6J1CSB8 (Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC111014132 PE=3 SV=1) HSP 1 Score: 474 bits (1221), Expect = 1.73e-168 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of MC08g1978.1 vs. ExPASy TrEMBL
Match: A0A1S3B4B8 (Bidirectional sugar transporter SWEET OS=Cucumis melo OX=3656 GN=LOC103485864 PE=3 SV=1) HSP 1 Score: 372 bits (954), Expect = 1.08e-127 Identity = 202/257 (78.60%), Postives = 227/257 (88.33%), Query Frame = 0
BLAST of MC08g1978.1 vs. ExPASy TrEMBL
Match: A0A0A0LMX6 (Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=Csa_2G083730 PE=3 SV=1) HSP 1 Score: 368 bits (945), Expect = 2.35e-126 Identity = 201/255 (78.82%), Postives = 224/255 (87.84%), Query Frame = 0
BLAST of MC08g1978.1 vs. ExPASy TrEMBL
Match: A0A1S3B3U3 (Bidirectional sugar transporter SWEET OS=Cucumis melo OX=3656 GN=LOC103485863 PE=3 SV=1) HSP 1 Score: 366 bits (939), Expect = 1.93e-125 Identity = 199/255 (78.04%), Postives = 224/255 (87.84%), Query Frame = 0
BLAST of MC08g1978.1 vs. ExPASy TrEMBL
Match: A0A6J1HLI7 (Bidirectional sugar transporter SWEET OS=Cucurbita maxima OX=3661 GN=LOC111465637 PE=3 SV=1) HSP 1 Score: 365 bits (936), Expect = 5.51e-125 Identity = 200/259 (77.22%), Postives = 226/259 (87.26%), Query Frame = 0
BLAST of MC08g1978.1 vs. TAIR 10
Match: AT2G39060.1 (Nodulin MtN3 family protein ) HSP 1 Score: 256.9 bits (655), Expect = 1.7e-68 Identity = 127/213 (59.62%), Postives = 170/213 (79.81%), Query Frame = 0
BLAST of MC08g1978.1 vs. TAIR 10
Match: AT5G13170.1 (senescence-associated gene 29 ) HSP 1 Score: 235.7 bits (600), Expect = 4.1e-62 Identity = 120/231 (51.95%), Postives = 173/231 (74.89%), Query Frame = 0
BLAST of MC08g1978.1 vs. TAIR 10
Match: AT5G23660.1 (homolog of Medicago truncatula MTN3 ) HSP 1 Score: 231.5 bits (589), Expect = 7.6e-61 Identity = 115/204 (56.37%), Postives = 158/204 (77.45%), Query Frame = 0
BLAST of MC08g1978.1 vs. TAIR 10
Match: AT5G50790.1 (Nodulin MtN3 family protein ) HSP 1 Score: 228.0 bits (580), Expect = 8.5e-60 Identity = 113/213 (53.05%), Postives = 161/213 (75.59%), Query Frame = 0
BLAST of MC08g1978.1 vs. TAIR 10
Match: AT3G48740.1 (Nodulin MtN3 family protein ) HSP 1 Score: 224.2 bits (570), Expect = 1.2e-58 Identity = 111/204 (54.41%), Postives = 154/204 (75.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following utr5 feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following utr3 feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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