MC08g0797.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAATCTACTATTTCCAAAGGAGGTAGGTTGATCCTAGCTCAATCGGTCCTCTCAAATGCTCCCACTTATCTTCTTTGGTTTTTTAAGCTTTCTTGCTCTCCTTGCAAAAATATCAAGGAGCTCGTTAGGAATTTT AAGAAATCTACTATTTCCAAAGGAGGTAGGTTGATCCTAGCTCAATCGGTCCTCTCAAATGCTCCCACTTATCTTCTTTGGTTTTTTAAGCTTTCTTGCTCTCCTTGCAAAAATATCAAGGAGCTCGTTAGGAATTTT AAGAAATCTACTATTTCCAAAGGAGGTAGGTTGATCCTAGCTCAATCGGTCCTCTCAAATGCTCCCACTTATCTTCTTTGGTTTTTTAAGCTTTCTTGCTCTCCTTGCAAAAATATCAAGGAGCTCGTTAGGAATTTT KKSTISKGGRLILAQSVLSNAPTYLLWFFKLSCSPCKNIKELVRNF Homology
BLAST of MC08g0797.1 vs. NCBI nr
Match: CAB4278922.1 (unnamed protein product [Prunus armeniaca] >CAB4283381.1 unnamed protein product [Prunus armeniaca] >CAB4284207.1 unnamed protein product [Prunus armeniaca] >CAB4284211.1 unnamed protein product [Prunus armeniaca] >CAB4284213.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 47.8 bits (112), Expect = 6.33e-05 Identity = 21/45 (46.67%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of MC08g0797.1 vs. NCBI nr
Match: TYK19487.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 48.9 bits (115), Expect = 6.64e-05 Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0
BLAST of MC08g0797.1 vs. NCBI nr
Match: XP_016902461.1 (PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo]) HSP 1 Score: 48.1 bits (113), Expect = 1.25e-04 Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of MC08g0797.1 vs. NCBI nr
Match: KAA0040037.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 47.4 bits (111), Expect = 2.33e-04 Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of MC08g0797.1 vs. NCBI nr
Match: KAA0041367.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 47.4 bits (111), Expect = 2.33e-04 Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of MC08g0797.1 vs. ExPASy TrEMBL
Match: A0A2N9HPQ4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42114 PE=4 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 1.72e-05 Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of MC08g0797.1 vs. ExPASy TrEMBL
Match: A0A2N9GBB9 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24316 PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 2.35e-05 Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of MC08g0797.1 vs. ExPASy TrEMBL
Match: A0A2N9GDT7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25176 PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 2.35e-05 Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of MC08g0797.1 vs. ExPASy TrEMBL
Match: A0A6J5XET8 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS30834 PE=4 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.07e-05 Identity = 21/45 (46.67%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of MC08g0797.1 vs. ExPASy TrEMBL
Match: A0A5D3D7E5 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001420 PE=4 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 3.22e-05 Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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