MC07g0188.1 (mRNA) Bitter gourd (Dali-11) v1

Overview
NameMC07g0188.1
TypemRNA
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
LocationMC07: 4224083 .. 4224304 (+)
Sequence length222
RNA-Seq ExpressionMC07g0188.1
SyntenyMC07g0188.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAGATGGCAGCTGTCAACAAGGGGATCCCTAACCTTCCTCCCTGCATACCTAAAGCCTGAAGCAAACGTATGGCACCACCTGTTCAAGAGCAAACTCATGCCAACTACGCTTGACGCCTCTATCACCAAGGAAAGAGTTCTACTCATGTTCTACATCATGGAAGGCCTTAGCATAAACGTAGGCCAGCTTATTGAGATGGAGATCACTGTTGTGGAGAAA

mRNA sequence

AGTAGATGGCAGCTGTCAACAAGGGGATCCCTAACCTTCCTCCCTGCATACCTAAAGCCTGAAGCAAACGTATGGCACCACCTGTTCAAGAGCAAACTCATGCCAACTACGCTTGACGCCTCTATCACCAAGGAAAGAGTTCTACTCATGTTCTACATCATGGAAGGCCTTAGCATAAACGTAGGCCAGCTTATTGAGATGGAGATCACTGTTGTGGAGAAA

Coding sequence (CDS)

AGTAGATGGCAGCTGTCAACAAGGGGATCCCTAACCTTCCTCCCTGCATACCTAAAGCCTGAAGCAAACGTATGGCACCACCTGTTCAAGAGCAAACTCATGCCAACTACGCTTGACGCCTCTATCACCAAGGAAAGAGTTCTACTCATGTTCTACATCATGGAAGGCCTTAGCATAAACGTAGGCCAGCTTATTGAGATGGAGATCACTGTTGTGGAGAAA

Protein sequence

SRWQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSINVGQLIEMEITVVEK
Homology
BLAST of MC07g0188.1 vs. NCBI nr
Match: PON71279.1 (hypothetical protein PanWU01x14_074190, partial [Parasponia andersonii])

HSP 1 Score: 69.7 bits (169), Expect = 4.20e-13
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 0

Query: 1  SRWQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSIN 60
          + W +S++ +   L + L P ANVW+H  KS+L+PTT   +++KERVLL++ ++ G SIN
Sbjct: 17 AEWNVSSQDAYICLRSSLNPPANVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSIN 76

Query: 61 VGQLIEMEITV 71
          VGQ+I+ EI V
Sbjct: 77 VGQMIQREICV 87

BLAST of MC07g0188.1 vs. NCBI nr
Match: PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii])

HSP 1 Score: 70.9 bits (172), Expect = 1.25e-12
Identity = 33/69 (47.83%), Postives = 50/69 (72.46%), Query Frame = 0

Query: 1   SRWQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSIN 60
           + W +S++G+ T L + L P A VW+H  KS+L+PTT   +++KERVLL++ ++ G SIN
Sbjct: 60  AEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSIN 119

Query: 61  VGQLIEMEI 69
           VGQ+I  EI
Sbjct: 120 VGQIIHREI 128

BLAST of MC07g0188.1 vs. NCBI nr
Match: PON44141.1 (hypothetical protein PanWU01x14_268850 [Parasponia andersonii])

HSP 1 Score: 65.5 bits (158), Expect = 1.02e-10
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 3   WQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSINVG 62
           W +S +G+  +L + L P A VW+H  KS L+PTT    ++KERVLL++ ++ G SINVG
Sbjct: 103 WNVSFQGAYIYLRSSLNPHAKVWYHFLKSHLLPTTHGKIVSKERVLLLYSMLTGKSINVG 162

Query: 63  QLIEMEI 69
           ++I  EI
Sbjct: 163 RMIHREI 169

BLAST of MC07g0188.1 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])

HSP 1 Score: 65.5 bits (158), Expect = 1.50e-10
Identity = 30/69 (43.48%), Postives = 48/69 (69.57%), Query Frame = 0

Query: 1   SRWQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSIN 60
           + W +S++G  T L + L P A +W+H  KS+L+PTT    ++KERVLL++ ++ G SIN
Sbjct: 70  AEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSIN 129

Query: 61  VGQLIEMEI 69
           +G++I  EI
Sbjct: 130 MGRMIHREI 138

BLAST of MC07g0188.1 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 65.1 bits (157), Expect = 2.70e-10
Identity = 30/69 (43.48%), Postives = 48/69 (69.57%), Query Frame = 0

Query: 1   SRWQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSIN 60
           + W +S++G+ T L + L P A VW+H  KS+L+PTT   +++KE V L++ ++ G SIN
Sbjct: 174 AEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVSLLYSMLTGKSIN 233

Query: 61  VGQLIEMEI 69
           VG++I  EI
Sbjct: 234 VGRMIHREI 242

BLAST of MC07g0188.1 vs. ExPASy TrEMBL
Match: A0A2P5DDA9 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_074190 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.03e-13
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 0

Query: 1  SRWQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSIN 60
          + W +S++ +   L + L P ANVW+H  KS+L+PTT   +++KERVLL++ ++ G SIN
Sbjct: 17 AEWNVSSQDAYICLRSSLNPPANVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSIN 76

Query: 61 VGQLIEMEITV 71
          VGQ+I+ EI V
Sbjct: 77 VGQMIQREICV 87

BLAST of MC07g0188.1 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.06e-13
Identity = 33/69 (47.83%), Postives = 50/69 (72.46%), Query Frame = 0

Query: 1   SRWQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSIN 60
           + W +S++G+ T L + L P A VW+H  KS+L+PTT   +++KERVLL++ ++ G SIN
Sbjct: 60  AEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSIN 119

Query: 61  VGQLIEMEI 69
           VGQ+I  EI
Sbjct: 120 VGQIIHREI 128

BLAST of MC07g0188.1 vs. ExPASy TrEMBL
Match: A0A2P5B5S0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_268850 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.95e-11
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 3   WQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSINVG 62
           W +S +G+  +L + L P A VW+H  KS L+PTT    ++KERVLL++ ++ G SINVG
Sbjct: 103 WNVSFQGAYIYLRSSLNPHAKVWYHFLKSHLLPTTHGKIVSKERVLLLYSMLTGKSINVG 162

Query: 63  QLIEMEI 69
           ++I  EI
Sbjct: 163 RMIHREI 169

BLAST of MC07g0188.1 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.28e-11
Identity = 30/69 (43.48%), Postives = 48/69 (69.57%), Query Frame = 0

Query: 1   SRWQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSIN 60
           + W +S++G  T L + L P A +W+H  KS+L+PTT    ++KERVLL++ ++ G SIN
Sbjct: 70  AEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSIN 129

Query: 61  VGQLIEMEI 69
           +G++I  EI
Sbjct: 130 MGRMIHREI 138

BLAST of MC07g0188.1 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.31e-10
Identity = 30/69 (43.48%), Postives = 48/69 (69.57%), Query Frame = 0

Query: 1   SRWQLSTRGSLTFLPAYLKPEANVWHHLFKSKLMPTTLDASITKERVLLMFYIMEGLSIN 60
           + W +S++G+ T L + L P A VW+H  KS+L+PTT   +++KE V L++ ++ G SIN
Sbjct: 174 AEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVSLLYSMLTGKSIN 233

Query: 61  VGQLIEMEI 69
           VG++I  EI
Sbjct: 234 VGRMIHREI 242

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
PON71279.14.20e-1346.48hypothetical protein PanWU01x14_074190, partial [Parasponia andersonii][more]
PON62892.11.25e-1247.83hypothetical protein PanWU01x14_135680 [Parasponia andersonii][more]
PON44141.11.02e-1046.27hypothetical protein PanWU01x14_268850 [Parasponia andersonii][more]
PON50458.11.50e-1043.48hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii][more]
PON70375.12.70e-1043.48hypothetical protein PanWU01x14_080440 [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
A0A2P5DDA92.03e-1346.48Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5CPE86.06e-1347.83Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE... [more]
A0A2P5B5S04.95e-1146.27Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_268850 PE... [more]
A0A2P5BNT07.28e-1143.48Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5DAQ21.31e-1043.48Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE... [more]
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MC07g0188MC07g0188gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MC07g0188.1-cdsMC07g0188.1-cds-MC07:4224083..4224304CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MC07g0188.1MC07g0188.1-proteinpolypeptide