MC07g0011.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0011.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribosome biogenesis NEP1-like protein
Location	MC07: 145078 .. 145974 (+)
Sequence length	757
RNA-Seq Expression	MC07g0011.1
Synteny	MC07g0011.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCTATGGAAATCAATGCTGGTGGGAATTCCAAGCAGGATAGAAGGGAAGCGCTGTTTTGCGTCGTCTACCACCGCTTCTTCTTCTTCAAGTTCTAAGTAATGAATTAATTAATAATTAAAGTAAGGCGTTATGGATTTGTTTGGTTGCTAGAATTAATGGGTGGGTGGCACAGGAGCGAGTACATGAAGGGGGAGTACGCCCCAATCTACATTGTTATGGGGATGGTGGTGGTTGCCGTGACGATCGGAACCCACACCGCGAAGCAGCAGCTGTTGCATTCGCCAGTGGTGATGCTGAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGATGACCCCGACACCGTCATCACATCCGCCGACAAGTTTGTCAACAAATCATTTCTTAGGAAGGTGGCTCACATTCAGGACCACAACAAAACGCTGCGCGATCCCCAACACCCCGATCCTTTTACACGGTTGGTATTAATTTAATTCCCTACACACTATACACATTAATAATACAATGTAAATGTTACATGCACTTGCCCTTGCAGGCCTCGAAATGCTGAAACTCTCAAAACGGCTGGAGTGGATCCTACCCACTCCCGCTAGCTGAACAACCTTTCCTTCACTTTCCCCATGATTCAACCCAATGTTACGTTATATGTACATACATAATGGCCCCTTCTGCTCTGCTCCGCTTCTGCTTCTAGAGTGAAGTACTAGCACGCATGTACTGGCGGCCCCCTGTTTGATTATTTGTTTTTATATATAATAAACCAAACAATTGTGCAATCCCGGTCCGGGAGCACGGATCCATGCCATTTCGGTTTTTGTATAATTCGGGCATTTATGCCATTTTGAGCTGGATTTCTTTTAGTTTCGTAATAGATGGGTGGTGAAGACATTGTCC

mRNA sequence

AAGCTATGGAAATCAATGCTGGTGGGAATTCCAAGCAGGATAGAAGGGAAGCGCTGTTTTGCGTCGTCTACCACCGCTTCTTCTTCTTCAAAATTAATGGGTGGGTGGCACAGGAGCGAGTACATGAAGGGGGAGTACGCCCCAATCTACATTGTTATGGGGATGGTGGTGGTTGCCGTGACGATCGGAACCCACACCGCGAAGCAGCAGCTGTTGCATTCGCCAGTGGTGATGCTGAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGATGACCCCGACACCGTCATCACATCCGCCGACAAGTTTGTCAACAAATCATTTCTTAGGAAGGTGGCTCACATTCAGGACCACAACAAAACGCTGCGCGATCCCCAACACCCCGATCCTTTTACACGGCCTCGAAATGCTGAAACTCTCAAAACGGCTGGAGTGGATCCTACCCACTCCCGCTAGCTGAACAACCTTTCCTTCACTTTCCCCATGATTCAACCCAATGTTACGTTATATGTACATACATAATGGCCCCTTCTGCTCTGCTCCGCTTCTGCTTCTAGAGTGAAGTACTAGCACGCATGTACTGGCGGCCCCCTGTTTGATTATTTGTTTTTATATATAATAAACCAAACAATTGTGCAATCCCGGTCCGGGAGCACGGATCCATGCCATTTCGGTTTTTGTATAATTCGGGCATTTATGCCATTTTGAGCTGGATTTCTTTTAGTTTCGTAATAGATGGGTGGTGAAGACATTGTCC

Coding sequence (CDS)

AAGCTATGGAAATCAATGCTGGTGGGAATTCCAAGCAGGATAGAAGGGAAGCGCTGTTTTGCGTCGTCTACCACCGCTTCTTCTTCTTCAAAATTAATGGGTGGGTGGCACAGGAGCGAGTACATGAAGGGGGAGTACGCCCCAATCTACATTGTTATGGGGATGGTGGTGGTTGCCGTGACGATCGGAACCCACACCGCGAAGCAGCAGCTGTTGCATTCGCCAGTGGTGATGCTGAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGATGACCCCGACACCGTCATCACATCCGCCGACAAGTTTGTCAACAAATCATTTCTTAGGAAGGTGGCTCACATTCAGGACCACAACAAAACGCTGCGCGATCCCCAACACCCCGATCCTTTTACACGGCCTCGAAATGCTGAAACTCTCAAAACGGCTGGAGTGGATCCTACCCACTCCCGCTAG

Protein sequence

KLWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR

Homology

[Close]

BLAST of MC07g0011.1 vs. NCBI nr
Match: XP_022148953.1 (uncharacterized protein LOC111017496 isoform X1 [Momordica charantia])

HSP 1 Score: 280 bits (716), Expect = 1.23e-94
Identity = 143/151 (94.70%), Postives = 144/151 (95.36%), Query Frame = 0


Query: 1   KLWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAV 60
           KLWKSMLVGIPSRIEGKRCFASSTTASSSS       +SEYMKGEYAPIYIVMGMVVVAV
Sbjct: 7   KLWKSMLVGIPSRIEGKRCFASSTTASSSSS-----SKSEYMKGEYAPIYIVMGMVVVAV 66

Query: 61  TIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNK 120
           TIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNK
Sbjct: 67  TIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNK 126

Query: 121 TLRDPQHPDPFTRPRNAETLKTAGVDPTHSR 151
           TLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Sbjct: 127 TLRDPQHPDPFTRPRNAETLKTAGVDPTHSR 152

[Close]

BLAST of MC07g0011.1 vs. NCBI nr
Match: XP_022148954.1 (uncharacterized protein LOC111017496 isoform X2 [Momordica charantia])

HSP 1 Score: 278 bits (711), Expect = 6.86e-94
Identity = 142/150 (94.67%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 2   LWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVT 61
           LWKSMLVGIPSRIEGKRCFASSTTASSSS       +SEYMKGEYAPIYIVMGMVVVAVT
Sbjct: 7   LWKSMLVGIPSRIEGKRCFASSTTASSSSS-----SKSEYMKGEYAPIYIVMGMVVVAVT 66

Query: 62  IGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKT 121
           IGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKT
Sbjct: 67  IGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKT 126

Query: 122 LRDPQHPDPFTRPRNAETLKTAGVDPTHSR 151
           LRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Sbjct: 127 LRDPQHPDPFTRPRNAETLKTAGVDPTHSR 151

[Close]

BLAST of MC07g0011.1 vs. NCBI nr
Match: XP_008459927.1 (PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo])

HSP 1 Score: 224 bits (572), Expect = 1.68e-72
Identity = 121/155 (78.06%), Postives = 128/155 (82.58%), Query Frame = 0


Query: 1   KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSKLMGGWHRSEYMKGEYAPIYIVM 60
           K+WKSMLVG  +RI+G R FASSTTA       SSSS   GG   SEYMKGEYAPIYIVM
Sbjct: 11  KMWKSMLVG--TRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVM 70

Query: 61  GMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVA 120
           GMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVITSADKF+NKSFLRKVA
Sbjct: 71  GMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVA 130

Query: 121 HIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT 148
           HIQD  KTL DP H DPFTRPRNAETLKTAGVDPT
Sbjct: 131 HIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPT 163

[Close]

BLAST of MC07g0011.1 vs. NCBI nr
Match: XP_038906484.1 (uncharacterized protein LOC120092464 [Benincasa hispida])

HSP 1 Score: 224 bits (570), Expect = 4.12e-72
Identity = 120/161 (74.53%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   KLWKSMLVGIPSRIEGKRCFASSTTA-------------SSSSKLMGGWHRSEYMKGEYA 60
           K+WK+MLVG  SRI+GKR  ASSTTA             SSSS   GG   SEYMKGEYA
Sbjct: 11  KVWKAMLVG--SRIQGKRRLASSTTAPAANNIQKASSSSSSSSSSKGGSSSSEYMKGEYA 70

Query: 61  PIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKS 120
           PIYIV+GMV VAV+IGTHTAKQQLLHSPVV  SKKKRESIPEVDDPDT+I SA+KF+NKS
Sbjct: 71  PIYIVVGMVAVAVSIGTHTAKQQLLHSPVVNFSKKKRESIPEVDDPDTIINSANKFINKS 130

Query: 121 FLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT 148
           FLRKVAHIQ+  KTL DP HP+PFTRPRNAETLKTAGVDPT
Sbjct: 131 FLRKVAHIQEDTKTLPDPVHPNPFTRPRNAETLKTAGVDPT 169

[Close]

BLAST of MC07g0011.1 vs. NCBI nr
Match: KAA0039866.1 (putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa] >TYK24635.1 putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 218 bits (556), Expect = 2.88e-70
Identity = 118/151 (78.15%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 6   MLVGIPSRIEGKRCFASSTTA--------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVV 65
           MLVG  +RI+G R FASSTTA        SSSS   GG   SEYMKGEYAPIYIVMGMV 
Sbjct: 1   MLVG--TRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVA 60

Query: 66  VAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQD 125
           V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVITSADKF+NKSFLRKVAHIQD
Sbjct: 61  VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQD 120

Query: 126 HNKTLRDPQHPDPFTRPRNAETLKTAGVDPT 148
             KTL DP HPDPFTRPRNAETLKTAGVDPT
Sbjct: 121 DTKTLPDPVHPDPFTRPRNAETLKTAGVDPT 149

[Close]

BLAST of MC07g0011.1 vs. ExPASy TrEMBL
Match: A0A6J1D5I0 (uncharacterized protein LOC111017496 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017496 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 5.94e-95
Identity = 143/151 (94.70%), Postives = 144/151 (95.36%), Query Frame = 0


Query: 1   KLWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAV 60
           KLWKSMLVGIPSRIEGKRCFASSTTASSSS       +SEYMKGEYAPIYIVMGMVVVAV
Sbjct: 7   KLWKSMLVGIPSRIEGKRCFASSTTASSSSS-----SKSEYMKGEYAPIYIVMGMVVVAV 66

Query: 61  TIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNK 120
           TIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNK
Sbjct: 67  TIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNK 126

Query: 121 TLRDPQHPDPFTRPRNAETLKTAGVDPTHSR 151
           TLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Sbjct: 127 TLRDPQHPDPFTRPRNAETLKTAGVDPTHSR 152

[Close]

BLAST of MC07g0011.1 vs. ExPASy TrEMBL
Match: A0A6J1D5L1 (uncharacterized protein LOC111017496 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017496 PE=4 SV=1)

HSP 1 Score: 278 bits (711), Expect = 3.32e-94
Identity = 142/150 (94.67%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 2   LWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVT 61
           LWKSMLVGIPSRIEGKRCFASSTTASSSS       +SEYMKGEYAPIYIVMGMVVVAVT
Sbjct: 7   LWKSMLVGIPSRIEGKRCFASSTTASSSSS-----SKSEYMKGEYAPIYIVMGMVVVAVT 66

Query: 62  IGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKT 121
           IGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKT
Sbjct: 67  IGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKT 126

Query: 122 LRDPQHPDPFTRPRNAETLKTAGVDPTHSR 151
           LRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Sbjct: 127 LRDPQHPDPFTRPRNAETLKTAGVDPTHSR 151

[Close]

BLAST of MC07g0011.1 vs. ExPASy TrEMBL
Match: A0A1S3CBE5 (uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 8.11e-73
Identity = 121/155 (78.06%), Postives = 128/155 (82.58%), Query Frame = 0


Query: 1   KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSKLMGGWHRSEYMKGEYAPIYIVM 60
           K+WKSMLVG  +RI+G R FASSTTA       SSSS   GG   SEYMKGEYAPIYIVM
Sbjct: 11  KMWKSMLVG--TRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVM 70

Query: 61  GMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVA 120
           GMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVITSADKF+NKSFLRKVA
Sbjct: 71  GMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVA 130

Query: 121 HIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT 148
           HIQD  KTL DP H DPFTRPRNAETLKTAGVDPT
Sbjct: 131 HIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPT 163

[Close]

BLAST of MC07g0011.1 vs. ExPASy TrEMBL
Match: A0A5D3DLZ1 (Putative Ribosome biogenesis protein NEP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001820 PE=4 SV=1)

HSP 1 Score: 218 bits (556), Expect = 1.39e-70
Identity = 118/151 (78.15%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 6   MLVGIPSRIEGKRCFASSTTA--------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVV 65
           MLVG  +RI+G R FASSTTA        SSSS   GG   SEYMKGEYAPIYIVMGMV 
Sbjct: 1   MLVG--TRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVA 60

Query: 66  VAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQD 125
           V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVITSADKF+NKSFLRKVAHIQD
Sbjct: 61  VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQD 120

Query: 126 HNKTLRDPQHPDPFTRPRNAETLKTAGVDPT 148
             KTL DP HPDPFTRPRNAETLKTAGVDPT
Sbjct: 121 DTKTLPDPVHPDPFTRPRNAETLKTAGVDPT 149

[Close]

BLAST of MC07g0011.1 vs. ExPASy TrEMBL
Match: A0A0A0KC39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1)

HSP 1 Score: 218 bits (554), Expect = 4.93e-70
Identity = 116/158 (73.42%), Postives = 126/158 (79.75%), Query Frame = 0


Query: 1   KLWKSMLVGIPSRIEGKRCFASSTT----------ASSSSKLMGGWHRSEYMKGEYAPIY 60
           K+WKSMLV   +RI+G R F+SSTT          +S SS   GG   SEYMKGEYAPIY
Sbjct: 11  KMWKSMLV--ETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGEYAPIY 70

Query: 61  IVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLR 120
           IVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVITSADKF+NKSFLR
Sbjct: 71  IVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLR 130

Query: 121 KVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT 148
           KVAHIQ   KTL DP HPDPFTRPRNAETLKTAG+DPT
Sbjct: 131 KVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPT 166

[Close]

BLAST of MC07g0011.1 vs. TAIR 10
Match: AT1G63060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 7.3e-27
Identity = 65/144 (45.14%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 5   SMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGT 64
           S L  + ++  G R FA  TT +  +K     +    + GE+AP+ I+ G V +AV +  
Sbjct: 7   SQLRPVGNQFGGSRRFA--TTVADGAKQT---YNKFSIMGEFAPVAIIGGFVGLAVLMAG 66

Query: 65  HTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKT-LR 124
           H+ KQQL+H+P +   K +R ++ EVDDP+  ++SADKF+NKS+LRKV  IQD +K  L 
Sbjct: 67  HSLKQQLMHAPAISTRKNRRAAVAEVDDPENCVSSADKFINKSWLRKVGQIQDKSKAILS 126

Query: 125 DPQHPDPFTRPRNAETLKTAGVDP 148
           DP  P+PFT PRNAETL + GV P
Sbjct: 127 DPTRPNPFTTPRNAETLNSVGVAP 145

[Close]

BLAST of MC07g0011.1 vs. TAIR 10
Match: AT5G07330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21
Identity = 46/107 (42.99%), Postives = 72/107 (67.29%), Query Frame = 0


Query: 43  KGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADK 102
           KG++ P+Y+ +G++ ++VT G +TA   L  +P V ++KK RE++PE++DPD V+  AD+
Sbjct: 51  KGDFTPVYVSIGLISLSVTFGVYTAYLHLHENPGVRVNKKMRETVPEIEDPDRVLNEADR 110

Query: 103 FVNKSFLRKVAHIQDHNK--TLRDPQHPDPFTRPRNAETLKTAGVDP 148
           F N+S+ RK+AH+Q+ +K   + DP   D F     A TLK  GVDP
Sbjct: 111 FANRSWFRKIAHVQEFDKQDVISDPIRKDQFAHKPRALTLKDVGVDP 157

The following BLAST results are available for this feature:

BLAST of MC07g0011.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g0011.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148953.1	1.23e-94	94.70	uncharacterized protein LOC111017496 isoform X1 [Momordica charantia]	[more]
XP_022148954.1	6.86e-94	94.67	uncharacterized protein LOC111017496 isoform X2 [Momordica charantia]	[more]
XP_008459927.1	1.68e-72	78.06	PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo]	[more]
XP_038906484.1	4.12e-72	74.53	uncharacterized protein LOC120092464 [Benincasa hispida]	[more]
KAA0039866.1	2.88e-70	78.15	putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa] >TYK24...	[more]

BLAST of MC07g0011.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5I0	5.94e-95	94.70	uncharacterized protein LOC111017496 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1D5L1	3.32e-94	94.67	uncharacterized protein LOC111017496 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3CBE5	8.11e-73	78.06	uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=...	[more]
A0A5D3DLZ1	1.39e-70	78.15	Putative Ribosome biogenesis protein NEP1-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0KC39	4.93e-70	73.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1	[more]

BLAST of MC07g0011.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63060.1	7.3e-27	45.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G07330.1	2.0e-21	42.99	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..151
None	No IPR available	PANTHER	PTHR33919	OS09G0127700 PROTEIN	coord: 3..149
None	No IPR available	PANTHER	PTHR33919:SF9	RIBOSOME BIOGENESIS NEP1-LIKE PROTEIN	coord: 3..149

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC07g0011	MC07g0011	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC07g0011.1-cds	MC07g0011.1-cds-MC07:145078..145168	CDS
MC07g0011.1-cds	MC07g0011.1-cds-MC07:145231..145537	CDS
MC07g0011.1-cds	MC07g0011.1-cds-MC07:145616..145673	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC07g0011.1-utr3	MC07g0011.1-utr3-MC07:145674..145974	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC07g0011.1	MC07g0011.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane