MC04g1892.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGCTTCCTATTATTTTTTGCTCTGCTTTTCATTAGTGCAAGATGTGGTTATGTTCGTCCTAATAGCGAGTGTGCCCCATCTTCACCTGAACGAGAGGCATACAAAATGCTTCCTTGTATGGCTGCTTCCAAAGATCCTTATTATCCAGTTTCCCAAAAATGTTGCGATCAAGTGAGGAAGCTAGGCCAGAGCACAAGCTGTCTTTGTGCAGTAATGTTGTCCAAAACAGCCCAAATGGTTGGGTCTAAGCCCGAAGTTGCCATTACAATTCCCAAACGTTGTGACATTGCTGAACGCCCTGTTGGCTATAACTGCGGGGGT ATTTGCTTCCTATTATTTTTTGCTCTGCTTTTCATTAGTGCAAGATGTGGTTATGTTCGTCCTAATAGCGAGTGTGCCCCATCTTCACCTGAACGAGAGGCATACAAAATGCTTCCTTGTATGGCTGCTTCCAAAGATCCTTATTATCCAGTTTCCCAAAAATGTTGCGATCAAGTGAGGAAGCTAGGCCAGAGCACAAGCTGTCTTTGTGCAGTAATGTTGTCCAAAACAGCCCAAATGGTTGGGTCTAAGCCCGAAGTTGCCATTACAATTCCCAAACGTTGTGACATTGCTGAACGCCCTGTTGGCTATAACTGCGGGGGT ATTTGCTTCCTATTATTTTTTGCTCTGCTTTTCATTAGTGCAAGATGTGGTTATGTTCGTCCTAATAGCGAGTGTGCCCCATCTTCACCTGAACGAGAGGCATACAAAATGCTTCCTTGTATGGCTGCTTCCAAAGATCCTTATTATCCAGTTTCCCAAAAATGTTGCGATCAAGTGAGGAAGCTAGGCCAGAGCACAAGCTGTCTTTGTGCAGTAATGTTGTCCAAAACAGCCCAAATGGTTGGGTCTAAGCCCGAAGTTGCCATTACAATTCCCAAACGTTGTGACATTGCTGAACGCCCTGTTGGCTATAACTGCGGGGGT ICFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKLGQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG Homology
BLAST of MC04g1892.1 vs. NCBI nr
Match: XP_022134464.1 (uncharacterized protein LOC111006702 [Momordica charantia]) HSP 1 Score: 225 bits (573), Expect = 4.47e-74 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MC04g1892.1 vs. NCBI nr
Match: XP_023515889.1 (uncharacterized protein LOC111779894 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 178 bits (451), Expect = 1.86e-55 Identity = 83/106 (78.30%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of MC04g1892.1 vs. NCBI nr
Match: XP_022962642.1 (uncharacterized protein LOC111463057 [Cucurbita moschata] >KAG6602641.1 hypothetical protein SDJN03_07874, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 173 bits (438), Expect = 1.79e-53 Identity = 81/106 (76.42%), Postives = 93/106 (87.74%), Query Frame = 0
BLAST of MC04g1892.1 vs. NCBI nr
Match: XP_038886380.1 (uncharacterized protein LOC120076581 [Benincasa hispida]) HSP 1 Score: 172 bits (437), Expect = 2.54e-53 Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of MC04g1892.1 vs. NCBI nr
Match: KAA0041465.1 (LTP_2 domain-containing protein [Cucumis melo var. makuwa] >TYK24340.1 LTP_2 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 169 bits (429), Expect = 4.77e-52 Identity = 74/100 (74.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of MC04g1892.1 vs. ExPASy TrEMBL
Match: A0A6J1BYT2 (uncharacterized protein LOC111006702 OS=Momordica charantia OX=3673 GN=LOC111006702 PE=4 SV=1) HSP 1 Score: 225 bits (573), Expect = 2.16e-74 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MC04g1892.1 vs. ExPASy TrEMBL
Match: A0A6J1HD74 (uncharacterized protein LOC111463057 OS=Cucurbita moschata OX=3662 GN=LOC111463057 PE=4 SV=1) HSP 1 Score: 173 bits (438), Expect = 8.65e-54 Identity = 81/106 (76.42%), Postives = 93/106 (87.74%), Query Frame = 0
BLAST of MC04g1892.1 vs. ExPASy TrEMBL
Match: A0A5A7TJ62 (LTP_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001170 PE=4 SV=1) HSP 1 Score: 169 bits (429), Expect = 2.31e-52 Identity = 74/100 (74.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of MC04g1892.1 vs. ExPASy TrEMBL
Match: A0A1S3B414 (uncharacterized protein LOC103485536 OS=Cucumis melo OX=3656 GN=LOC103485536 PE=4 SV=1) HSP 1 Score: 169 bits (429), Expect = 2.38e-52 Identity = 74/100 (74.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of MC04g1892.1 vs. ExPASy TrEMBL
Match: A0A6J1JQF7 (uncharacterized protein LOC111487407 OS=Cucurbita maxima OX=3661 GN=LOC111487407 PE=4 SV=1) HSP 1 Score: 165 bits (417), Expect = 1.37e-50 Identity = 78/106 (73.58%), Postives = 90/106 (84.91%), Query Frame = 0
BLAST of MC04g1892.1 vs. TAIR 10
Match: AT5G05960.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 107.5 bits (267), Expect = 7.0e-24 Identity = 51/103 (49.51%), Postives = 70/103 (67.96%), Query Frame = 0
BLAST of MC04g1892.1 vs. TAIR 10
Match: AT3G53980.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of MC04g1892.1 vs. TAIR 10
Match: AT3G53980.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of MC04g1892.1 vs. TAIR 10
Match: AT2G37870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 5.6e-13 Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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